Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_pT_L12
         (730 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    22   4.4  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    22   4.4  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    22   5.8  
AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    21   7.7  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    21   7.7  

>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 15/49 (30%), Positives = 25/49 (51%)
 Frame = +2

Query: 224 LLNVSGILY*LLSLKITQSIFADI*SLLFFFDQLFASSIEHLTGKIRDS 370
           ++N++G+L+  L+    Q++FA I     F  +L     EH  G  R S
Sbjct: 443 VMNINGVLFVFLTNMTFQNVFAVI---NVFSGELPVFLQEHRNGMYRPS 488


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 15/49 (30%), Positives = 25/49 (51%)
 Frame = +2

Query: 224 LLNVSGILY*LLSLKITQSIFADI*SLLFFFDQLFASSIEHLTGKIRDS 370
           ++N++G+L+  L+    Q++FA I     F  +L     EH  G  R S
Sbjct: 443 VMNINGVLFVFLTNMTFQNVFAVI---NVFSGELPVFLQEHRNGMYRPS 488


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 13/37 (35%), Positives = 19/37 (51%)
 Frame = -2

Query: 492 LKTDGLAWELFQMDLMVLRVMLYIHSLLLLPMESGKL 382
           LKTD     +    L++  V+LY  SL   P+  G+L
Sbjct: 36  LKTDKNCTIVIIFHLILFAVLLYFASLEKNPLFDGQL 72


>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 8/26 (30%), Positives = 12/26 (46%)
 Frame = +2

Query: 32  NEQNDMKYLTTESECFKNIYNSNTKI 109
           NE+ D      + EC+K   N N  +
Sbjct: 154 NEETDKLVEVLKEECYKPFVNVNAHV 179


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 8/26 (30%), Positives = 12/26 (46%)
 Frame = +2

Query: 32  NEQNDMKYLTTESECFKNIYNSNTKI 109
           NE+ D      + EC+K   N N  +
Sbjct: 154 NEETDKLVEVLKEECYKPFINVNAHV 179


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,102
Number of Sequences: 336
Number of extensions: 3597
Number of successful extensions: 10
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19467635
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)