Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P28_pT_L12
(730 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U20352-1|AAC16436.1| 334|Homo sapiens malate dehydrogenase prot... 161 2e-39
D55654-1|BAA09513.1| 334|Homo sapiens cytosolic malate dehydrog... 161 2e-39
CR457405-1|CAG33686.1| 334|Homo sapiens MDH1 protein. 161 2e-39
BC001484-1|AAH01484.1| 334|Homo sapiens malate dehydrogenase 1,... 161 2e-39
AC016734-1|AAY14893.1| 334|Homo sapiens unknown protein. 161 2e-39
BC088356-1|AAH88356.1| 518|Homo sapiens malate dehydrogenase 1B... 56 1e-07
BC033509-1|AAH33509.1| 283|Homo sapiens MDH1B protein protein. 54 5e-07
AC008269-1|AAX93274.1| 283|Homo sapiens unknown protein. 54 5e-07
BC040341-1|AAH40341.1| 1063|Homo sapiens KIAA1618 protein. 31 5.6
BC036891-1|AAH36891.1| 1063|Homo sapiens KIAA1618 protein. 31 5.6
AB046838-1|BAB13444.1| 1415|Homo sapiens KIAA1618 protein protein. 31 5.6
>U20352-1|AAC16436.1| 334|Homo sapiens malate dehydrogenase
protein.
Length = 334
Score = 161 bits (391), Expect = 2e-39
Identities = 78/148 (52%), Positives = 98/148 (66%), Gaps = 2/148 (1%)
Frame = -1
Query: 730 IIWGNHSSTQFPDASNAVAIVGGAXKSVSEIINDDAYLKGAFVTTVQKRGAAVIXXXXXX 551
IIWGNHSSTQ+PD ++A + G V E + DD++LKG FVTTVQ+RGAAVI
Sbjct: 182 IIWGNHSSTQYPDVNHAKVKLQGKEVGVYEALKDDSWLKGEFVTTVQQRGAAVIKARKLS 241
Query: 550 XXXXXXXXXSDHMRD-WFLGTEDRWVSMGVVSDG-SYGTPRDVVYSFPVTVTNGKWKIVE 377
DH+RD WF E +VSMGV+SDG SYG P D++YSFPV + N WK VE
Sbjct: 242 SAMSAAKAICDHVRDIWFGTPEGEFVSMGVISDGNSYGVPDDLLYSFPVVIKNKTWKFVE 301
Query: 376 GLTISDFARQMLDATGKELVEEKQEALD 293
GL I+DF+R+ +D T KEL EEK+ A +
Sbjct: 302 GLPINDFSREKMDLTAKELTEEKESAFE 329
>D55654-1|BAA09513.1| 334|Homo sapiens cytosolic malate
dehydrogenase protein.
Length = 334
Score = 161 bits (391), Expect = 2e-39
Identities = 78/148 (52%), Positives = 98/148 (66%), Gaps = 2/148 (1%)
Frame = -1
Query: 730 IIWGNHSSTQFPDASNAVAIVGGAXKSVSEIINDDAYLKGAFVTTVQKRGAAVIXXXXXX 551
IIWGNHSSTQ+PD ++A + G V E + DD++LKG FVTTVQ+RGAAVI
Sbjct: 182 IIWGNHSSTQYPDVNHAKVKLQGKEVGVYEALKDDSWLKGEFVTTVQQRGAAVIKARKLS 241
Query: 550 XXXXXXXXXSDHMRD-WFLGTEDRWVSMGVVSDG-SYGTPRDVVYSFPVTVTNGKWKIVE 377
DH+RD WF E +VSMGV+SDG SYG P D++YSFPV + N WK VE
Sbjct: 242 SAMSAAKAICDHVRDIWFGTPEGEFVSMGVISDGNSYGVPDDLLYSFPVVIKNKTWKFVE 301
Query: 376 GLTISDFARQMLDATGKELVEEKQEALD 293
GL I+DF+R+ +D T KEL EEK+ A +
Sbjct: 302 GLPINDFSREKMDLTAKELTEEKESAFE 329
>CR457405-1|CAG33686.1| 334|Homo sapiens MDH1 protein.
Length = 334
Score = 161 bits (391), Expect = 2e-39
Identities = 78/148 (52%), Positives = 98/148 (66%), Gaps = 2/148 (1%)
Frame = -1
Query: 730 IIWGNHSSTQFPDASNAVAIVGGAXKSVSEIINDDAYLKGAFVTTVQKRGAAVIXXXXXX 551
IIWGNHSSTQ+PD ++A + G V E + DD++LKG FVTTVQ+RGAAVI
Sbjct: 182 IIWGNHSSTQYPDVNHAKVKLQGKEVGVYEALKDDSWLKGEFVTTVQQRGAAVIKARKLS 241
Query: 550 XXXXXXXXXSDHMRD-WFLGTEDRWVSMGVVSDG-SYGTPRDVVYSFPVTVTNGKWKIVE 377
DH+RD WF E +VSMGV+SDG SYG P D++YSFPV + N WK VE
Sbjct: 242 SAMSAAKAICDHVRDIWFGTPEGEFVSMGVISDGNSYGVPDDLLYSFPVVIKNKTWKFVE 301
Query: 376 GLTISDFARQMLDATGKELVEEKQEALD 293
GL I+DF+R+ +D T KEL EEK+ A +
Sbjct: 302 GLPINDFSREKMDLTAKELTEEKESAFE 329
>BC001484-1|AAH01484.1| 334|Homo sapiens malate dehydrogenase 1,
NAD (soluble) protein.
Length = 334
Score = 161 bits (391), Expect = 2e-39
Identities = 78/148 (52%), Positives = 98/148 (66%), Gaps = 2/148 (1%)
Frame = -1
Query: 730 IIWGNHSSTQFPDASNAVAIVGGAXKSVSEIINDDAYLKGAFVTTVQKRGAAVIXXXXXX 551
IIWGNHSSTQ+PD ++A + G V E + DD++LKG FVTTVQ+RGAAVI
Sbjct: 182 IIWGNHSSTQYPDVNHAKVKLQGKEVGVYEALKDDSWLKGEFVTTVQQRGAAVIKARKLS 241
Query: 550 XXXXXXXXXSDHMRD-WFLGTEDRWVSMGVVSDG-SYGTPRDVVYSFPVTVTNGKWKIVE 377
DH+RD WF E +VSMGV+SDG SYG P D++YSFPV + N WK VE
Sbjct: 242 SAMSAAKAICDHVRDIWFGTPEGEFVSMGVISDGNSYGVPDDLLYSFPVVIKNKTWKFVE 301
Query: 376 GLTISDFARQMLDATGKELVEEKQEALD 293
GL I+DF+R+ +D T KEL EEK+ A +
Sbjct: 302 GLPINDFSREKMDLTAKELTEEKESAFE 329
>AC016734-1|AAY14893.1| 334|Homo sapiens unknown protein.
Length = 334
Score = 161 bits (391), Expect = 2e-39
Identities = 78/148 (52%), Positives = 98/148 (66%), Gaps = 2/148 (1%)
Frame = -1
Query: 730 IIWGNHSSTQFPDASNAVAIVGGAXKSVSEIINDDAYLKGAFVTTVQKRGAAVIXXXXXX 551
IIWGNHSSTQ+PD ++A + G V E + DD++LKG FVTTVQ+RGAAVI
Sbjct: 182 IIWGNHSSTQYPDVNHAKVKLQGKEVGVYEALKDDSWLKGEFVTTVQQRGAAVIKARKLS 241
Query: 550 XXXXXXXXXSDHMRD-WFLGTEDRWVSMGVVSDG-SYGTPRDVVYSFPVTVTNGKWKIVE 377
DH+RD WF E +VSMGV+SDG SYG P D++YSFPV + N WK VE
Sbjct: 242 SAMSAAKAICDHVRDIWFGTPEGEFVSMGVISDGNSYGVPDDLLYSFPVVIKNKTWKFVE 301
Query: 376 GLTISDFARQMLDATGKELVEEKQEALD 293
GL I+DF+R+ +D T KEL EEK+ A +
Sbjct: 302 GLPINDFSREKMDLTAKELTEEKESAFE 329
>BC088356-1|AAH88356.1| 518|Homo sapiens malate dehydrogenase 1B,
NAD (soluble) protein.
Length = 518
Score = 56.4 bits (130), Expect = 1e-07
Identities = 40/154 (25%), Positives = 69/154 (44%), Gaps = 9/154 (5%)
Frame = -1
Query: 730 IIWGNHSSTQFPDASNA------VAIVGGAXKS--VSEIINDDAYLKGAFVTTVQKRGAA 575
IIWGN S + D AI G S V +I D ++K FV ++
Sbjct: 309 IIWGNISGNNYVDLRKTRVYRYESAIWGPLHYSRPVLNLIFDSEWVKREFVAILKN---- 364
Query: 574 VIXXXXXXXXXXXXXXXSDHMRDWFLGTED-RWVSMGVVSDGSYGTPRDVVYSFPVTVTN 398
+ + ++ W+ G+ VS+G++S+G +G P+ +V+S PV N
Sbjct: 365 LTTTGRQFGGILAAHSIATTLKYWYHGSPPGEIVSLGILSEGQFGIPKGIVFSMPVKFEN 424
Query: 397 GKWKIVEGLTISDFARQMLDATGKELVEEKQEAL 296
G W ++ L + + Q++ +L++EK AL
Sbjct: 425 GTWVVLTDLKDVEISEQIMTRMTSDLIQEKLVAL 458
>BC033509-1|AAH33509.1| 283|Homo sapiens MDH1B protein protein.
Length = 283
Score = 54.0 bits (124), Expect = 5e-07
Identities = 23/74 (31%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Frame = -1
Query: 514 MRDWFLGTED-RWVSMGVVSDGSYGTPRDVVYSFPVTVTNGKWKIVEGLTISDFARQMLD 338
++ W+ G+ VS+G++S+G +G P+ +V+S PV NG W ++ L + + Q++
Sbjct: 172 LKYWYHGSPPGEIVSLGILSEGQFGIPKGIVFSMPVKFENGTWVVLTDLKDVEISEQIMT 231
Query: 337 ATGKELVEEKQEAL 296
+L++EK AL
Sbjct: 232 RMTSDLIQEKLVAL 245
>AC008269-1|AAX93274.1| 283|Homo sapiens unknown protein.
Length = 283
Score = 54.0 bits (124), Expect = 5e-07
Identities = 23/74 (31%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Frame = -1
Query: 514 MRDWFLGTED-RWVSMGVVSDGSYGTPRDVVYSFPVTVTNGKWKIVEGLTISDFARQMLD 338
++ W+ G+ VS+G++S+G +G P+ +V+S PV NG W ++ L + + Q++
Sbjct: 172 LKYWYHGSPPGEIVSLGILSEGQFGIPKGIVFSMPVKFENGTWVVLTDLKDVEISEQIMT 231
Query: 337 ATGKELVEEKQEAL 296
+L++EK AL
Sbjct: 232 RMTSDLIQEKLVAL 245
>BC040341-1|AAH40341.1| 1063|Homo sapiens KIAA1618 protein.
Length = 1063
Score = 30.7 bits (66), Expect = 5.6
Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = -1
Query: 391 WKIVEGLTISDFARQMLDATG-KELVEEKQEALDV 290
W +EGL+ S F QMLD + + + EKQ L +
Sbjct: 719 WAALEGLSFSPFREQMLDTSSLLQFMREKQHLLSI 753
>BC036891-1|AAH36891.1| 1063|Homo sapiens KIAA1618 protein.
Length = 1063
Score = 30.7 bits (66), Expect = 5.6
Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = -1
Query: 391 WKIVEGLTISDFARQMLDATG-KELVEEKQEALDV 290
W +EGL+ S F QMLD + + + EKQ L +
Sbjct: 719 WAALEGLSFSPFREQMLDTSSLLQFMREKQHLLSI 753
>AB046838-1|BAB13444.1| 1415|Homo sapiens KIAA1618 protein protein.
Length = 1415
Score = 30.7 bits (66), Expect = 5.6
Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = -1
Query: 391 WKIVEGLTISDFARQMLDATG-KELVEEKQEALDV 290
W +EGL+ S F QMLD + + + EKQ L +
Sbjct: 584 WAALEGLSFSPFREQMLDTSSLLQFMREKQHLLSI 618
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,666,613
Number of Sequences: 237096
Number of extensions: 2035207
Number of successful extensions: 3436
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 3318
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3426
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8623170556
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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