Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_pT_L10
         (773 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q22525 Cluster: Intestinal acid phosphatase protein 4; ...    36   0.85 
UniRef50_Q4GYW0 Cluster: Putative uncharacterized protein; n=1; ...    35   2.6  
UniRef50_Q4V1R1 Cluster: Putative uncharacterized protein; n=1; ...    34   4.5  
UniRef50_Q239Y4 Cluster: Putative uncharacterized protein; n=1; ...    33   6.0  

>UniRef50_Q22525 Cluster: Intestinal acid phosphatase protein 4;
           n=2; Caenorhabditis|Rep: Intestinal acid phosphatase
           protein 4 - Caenorhabditis elegans
          Length = 461

 Score = 36.3 bits (80), Expect = 0.85
 Identities = 18/47 (38%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
 Frame = -1

Query: 311 YNHLFSNQNL*CASNNTKILKFANKISLH-YLSHKTNLYSFWDLLSV 174
           YNH+  N+   C+SNN K   + N++    Y +H T LY+ + LL V
Sbjct: 303 YNHM--NRKTQCSSNNGKECTYTNRLKFFAYSAHDTTLYALFSLLGV 347


>UniRef50_Q4GYW0 Cluster: Putative uncharacterized protein; n=1;
           Trypanosoma brucei|Rep: Putative uncharacterized protein
           - Trypanosoma brucei
          Length = 102

 Score = 34.7 bits (76), Expect = 2.6
 Identities = 24/79 (30%), Positives = 39/79 (49%)
 Frame = +1

Query: 253 SILVLLLAHHRF*LLNKWLYFQEYNFYMLFLFVYYTGDSVPSILETN*FLCLLQRTRCEA 432
           S L L   HH+  ++ + L+F+ Y F+ ++LF   T  S P +L     L L+       
Sbjct: 4   SFLFLPSYHHQNPIITQSLHFKNYLFFRIYLF---TSFSFPPLL----LLLLIILLLSVV 56

Query: 433 TTYLMNFTFPTIFASH*KF 489
           + ++ NF FP+ F S   F
Sbjct: 57  SFFIFNFIFPSYFFSFLSF 75


>UniRef50_Q4V1R1 Cluster: Putative uncharacterized protein; n=1;
           Bacillus cereus E33L|Rep: Putative uncharacterized
           protein - Bacillus cereus (strain ZK / E33L)
          Length = 146

 Score = 33.9 bits (74), Expect = 4.5
 Identities = 14/33 (42%), Positives = 20/33 (60%)
 Frame = -1

Query: 308 NHLFSNQNL*CASNNTKILKFANKISLHYLSHK 210
           NHLFSNQN  C  NNT  + +A  ++  + S +
Sbjct: 114 NHLFSNQNKNCTCNNTGCIDYATYVAEKFKSER 146


>UniRef50_Q239Y4 Cluster: Putative uncharacterized protein; n=1;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 1106

 Score = 33.5 bits (73), Expect = 6.0
 Identities = 16/38 (42%), Positives = 24/38 (63%)
 Frame = -1

Query: 146 HTSCLVTMCLFMLL*S*ILCNFNRCILTNCQL*SNKIG 33
           H  C+++  +F+LL   IL +F +CI  NCQ+ S K G
Sbjct: 41  HQICMISHIIFILLKILILSHFVKCIDPNCQIISPKDG 78


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 685,735,726
Number of Sequences: 1657284
Number of extensions: 13492759
Number of successful extensions: 29591
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 28111
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29573
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 65027411410
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)