Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_pT_L10
         (773 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    25   0.89 
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    23   2.1  
AF025669-1|AAB81523.1|  243|Tribolium castaneum GABA receptor su...    23   2.1  
AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    21   8.3  

>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 24.6 bits (51), Expect = 0.89
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +1

Query: 292 LLNKWLYFQEYNFYMLFLF 348
           + NKW  F+ Y+ + +FLF
Sbjct: 60  IFNKWNQFRSYSNFSVFLF 78


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 10/26 (38%), Positives = 17/26 (65%)
 Frame = -2

Query: 205 ICIVFGIFYQ*ILIFANGAATRVVLL 128
           I I   +F+  I++ +N A TR++LL
Sbjct: 98  IFIFVNVFFWVIILMSNYAFTRIILL 123


>AF025669-1|AAB81523.1|  243|Tribolium castaneum GABA receptor
           subunit protein.
          Length = 243

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = -2

Query: 172 ILIFANGAATRVVLLLCACSCYCNLEY 92
           I +  +G+ TR + L    SC  NL+Y
Sbjct: 147 IRVHHSGSITRSIRLTITASCPMNLQY 173


>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -1

Query: 635 NYLQCYKNRYFNVQKY 588
           NY    KNR+  +QKY
Sbjct: 181 NYALALKNRFKELQKY 196


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 179,969
Number of Sequences: 336
Number of extensions: 4133
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20857569
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)