Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_pT_L10
         (773 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y12322-1|CAA72991.1| 1191|Drosophila melanogaster u-shaped protein.    29   5.4  
BT015278-1|AAT94507.1| 1191|Drosophila melanogaster LD12631p pro...    29   5.4  
AE014134-116|AAF51488.2| 1191|Drosophila melanogaster CG2762-PA ...    29   5.4  
AY069383-1|AAL39528.1|  515|Drosophila melanogaster LD09078p pro...    29   9.4  
AF071503-1|AAC28455.1|  515|Drosophila melanogaster brahma assoc...    29   9.4  
AE014298-1855|AAF48235.1|  515|Drosophila melanogaster CG4303-PA...    29   9.4  

>Y12322-1|CAA72991.1| 1191|Drosophila melanogaster u-shaped protein.
          Length = 1191

 Score = 29.5 bits (63), Expect = 5.4
 Identities = 16/45 (35%), Positives = 22/45 (48%)
 Frame = +3

Query: 27  IQTNFIALQLAICQDTPIKITQYSRLQ*HEQAHSNKTTRVAAPLA 161
           ++T  +A Q  IC    IK T    L+ H+  +  K   VAAP A
Sbjct: 787 VETTPVAYQQLICAACGIKYTSLDNLRAHQNYYCPKGGAVAAPAA 831


>BT015278-1|AAT94507.1| 1191|Drosophila melanogaster LD12631p
           protein.
          Length = 1191

 Score = 29.5 bits (63), Expect = 5.4
 Identities = 16/45 (35%), Positives = 22/45 (48%)
 Frame = +3

Query: 27  IQTNFIALQLAICQDTPIKITQYSRLQ*HEQAHSNKTTRVAAPLA 161
           ++T  +A Q  IC    IK T    L+ H+  +  K   VAAP A
Sbjct: 787 VETTPVAYQQLICAACGIKYTSLDNLRAHQNYYCPKGGAVAAPAA 831


>AE014134-116|AAF51488.2| 1191|Drosophila melanogaster CG2762-PA
           protein.
          Length = 1191

 Score = 29.5 bits (63), Expect = 5.4
 Identities = 16/45 (35%), Positives = 22/45 (48%)
 Frame = +3

Query: 27  IQTNFIALQLAICQDTPIKITQYSRLQ*HEQAHSNKTTRVAAPLA 161
           ++T  +A Q  IC    IK T    L+ H+  +  K   VAAP A
Sbjct: 787 VETTPVAYQQLICAACGIKYTSLDNLRAHQNYYCPKGGAVAAPAA 831


>AY069383-1|AAL39528.1|  515|Drosophila melanogaster LD09078p
           protein.
          Length = 515

 Score = 28.7 bits (61), Expect = 9.4
 Identities = 9/32 (28%), Positives = 22/32 (68%)
 Frame = +1

Query: 31  KPILLLYNWQFVKIHLLKLHNIQDYSNMNKHI 126
           +P+++   WQ++K H L+  + ++Y N +K++
Sbjct: 313 RPVIISALWQYIKTHKLQDAHEREYINCDKYL 344


>AF071503-1|AAC28455.1|  515|Drosophila melanogaster brahma
           associated protein 60 kDa protein.
          Length = 515

 Score = 28.7 bits (61), Expect = 9.4
 Identities = 9/32 (28%), Positives = 22/32 (68%)
 Frame = +1

Query: 31  KPILLLYNWQFVKIHLLKLHNIQDYSNMNKHI 126
           +P+++   WQ++K H L+  + ++Y N +K++
Sbjct: 313 RPVIISALWQYIKTHKLQDAHEREYINCDKYL 344


>AE014298-1855|AAF48235.1|  515|Drosophila melanogaster CG4303-PA
           protein.
          Length = 515

 Score = 28.7 bits (61), Expect = 9.4
 Identities = 9/32 (28%), Positives = 22/32 (68%)
 Frame = +1

Query: 31  KPILLLYNWQFVKIHLLKLHNIQDYSNMNKHI 126
           +P+++   WQ++K H L+  + ++Y N +K++
Sbjct: 313 RPVIISALWQYIKTHKLQDAHEREYINCDKYL 344


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,711,991
Number of Sequences: 53049
Number of extensions: 612861
Number of successful extensions: 1144
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1115
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1144
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3581842374
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)