Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_pT_L08
         (608 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    22   4.6  
U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.     21   8.1  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    21   8.1  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   8.1  
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    21   8.1  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           21   8.1  
AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant transcrip...    21   8.1  

>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = -1

Query: 371 FARYLENFNTVINSTHFKE 315
           +A + +NF  ++N TH  E
Sbjct: 78  YAIFQKNFTNIVNLTHLLE 96


>U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.
          Length = 283

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 9/32 (28%), Positives = 13/32 (40%)
 Frame = +3

Query: 93  GWHNASVHHSKTCHTVNS*PRVYHPYMFIAHG 188
           G+HN   ++S            YHP +   HG
Sbjct: 63  GYHNHQNYNSNVLSNGYGYGNYYHPQLHSHHG 94


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 9/32 (28%), Positives = 13/32 (40%)
 Frame = +3

Query: 93  GWHNASVHHSKTCHTVNS*PRVYHPYMFIAHG 188
           G+HN   ++S            YHP +   HG
Sbjct: 63  GYHNHQNYNSNVLSNGYGYGNYYHPQLHSHHG 94


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = +1

Query: 169 ICLSPMAQVPTVWYCVL 219
           I +S +  + TVW C L
Sbjct: 724 IAVSGLVYIATVWICTL 740


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 12/42 (28%), Positives = 20/42 (47%)
 Frame = -1

Query: 155 SRLRVHGVTGLRVVDASVMPTITSGNTYAPVVMIAEKAADMI 30
           +R  + GV+   +    VM    S    +PVV+  + AAD +
Sbjct: 315 NRRTILGVSNAVITFLIVMVQKASYEKLSPVVLFIQVAADTV 356


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 9/32 (28%), Positives = 13/32 (40%)
 Frame = +3

Query: 93  GWHNASVHHSKTCHTVNS*PRVYHPYMFIAHG 188
           G+HN   ++S            YHP +   HG
Sbjct: 63  GYHNHQNYNSNVLSNGYGYGNYYHPQLHSHHG 94


>AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant
           transcription factor TcDfd1 protein.
          Length = 126

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 9/32 (28%), Positives = 13/32 (40%)
 Frame = +3

Query: 93  GWHNASVHHSKTCHTVNS*PRVYHPYMFIAHG 188
           G+HN   ++S            YHP +   HG
Sbjct: 63  GYHNHQNYNSNVLSNGYGYGNYYHPQLHSHHG 94


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 133,460
Number of Sequences: 336
Number of extensions: 2763
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15457268
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)