Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P28_pT_L08
(608 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_08_0682 + 19858131-19858230,19858313-19858954,19859041-198600... 55 4e-08
03_01_0127 + 988066-988171,988259-988881,988986-989396,989463-99... 52 3e-07
02_05_0304 + 27721413-27721479,27721561-27722208,27722399-277233... 51 8e-07
04_04_0862 + 28843654-28844386,28844486-28844895,28844995-288455... 47 1e-05
09_03_0047 - 11867302-11867356,11867461-11868032,11868485-118688... 43 2e-04
08_02_0598 - 19149218-19149524,19150325-19150896,19151374-191517... 42 4e-04
06_03_0980 + 26520832-26520922,26521021-26521409,26521612-265219... 39 0.003
01_06_0116 - 26595570-26596607,26596964-26598353,26599386-265999... 30 1.6
02_04_0656 - 24769069-24770814,24771552-24771608,24773307-247735... 29 2.9
11_06_0221 - 21387365-21387652,21387892-21389952,21390360-21390395 28 5.0
05_02_0033 + 5847754-5847982,5848308-5848437,5849038-5849116,584... 28 5.0
03_05_0826 - 27994004-27994966,27995053-27996030,27996101-27996478 28 5.0
11_01_0550 + 4355857-4356051,4357287-4357355,4357429-4357561,435... 28 6.7
03_06_0273 + 32787021-32787434,32788096-32788221,32788305-327883... 28 6.7
01_01_0691 - 5328169-5328228,5328300-5328488,5328611-5328768,532... 28 6.7
07_03_0919 - 22594980-22595111,22595398-22595427,22595522-225955... 27 8.8
05_05_0375 + 24486056-24487333 27 8.8
>10_08_0682 +
19858131-19858230,19858313-19858954,19859041-19860016,
19860105-19860147
Length = 586
Score = 55.2 bits (127), Expect = 4e-08
Identities = 44/156 (28%), Positives = 64/156 (41%), Gaps = 9/156 (5%)
Frame = -1
Query: 494 FSLITLLHPESRGKISLKSSNPEDPPIIYSGYFTNENDLDNFARYLENFNTVINSTHFKE 315
F L +L P S G + L++++P P + YF DL+ +E VI S F
Sbjct: 420 FILEKILGPVSSGHVELRTTDPRANPSVTFNYFREAEDLERCVHGIETIERVIQSRAFSN 479
Query: 314 LK--SQVVDLKVTQCRQWPFG-------SHEYWACYALNLASTQYHTVGTCAMGDKHIGV 162
+ V+ T +P Y ++ T +H G C +G V
Sbjct: 480 FTYANASVESIFTDSANFPVNLLPRHVNDSRSPEQYCMDTVMTIWHYHGGCHVG----AV 535
Query: 161 VDSRLRVHGVTGLRVVDASVMPTITSGNTYAPVVMI 54
VD RV GV GLRV+D+S N A V+M+
Sbjct: 536 VDDDYRVFGVQGLRVIDSSTFKYSPGTNPQATVMML 571
>03_01_0127 +
988066-988171,988259-988881,988986-989396,989463-990037,
990137-990194
Length = 590
Score = 52.4 bits (120), Expect = 3e-07
Identities = 46/155 (29%), Positives = 67/155 (43%), Gaps = 8/155 (5%)
Frame = -1
Query: 494 FSLITLLHPESRGKISLKSSNPEDPPIIYSGYFTNENDLDNFARYLENFNTVINSTHFKE 315
F L +L P S G ++L+S++P+ P + YF + D++ R +E V+ S F
Sbjct: 416 FILEKILGPMSTGHVALRSADPDANPAVTFNYFRDPRDVERCVRGIETIERVVRSRAFAR 475
Query: 314 LK-SQVVDLKVT----QCRQWPFGSHEYWACYALNLASTQYHTVGTC--AMGDKHIG-VV 159
+ V ++ + P A L TV T G H+G VV
Sbjct: 476 FTYANVTAMEAAVLGRRAGHLPVNLLPRRATDTRPLQQYCRETVMTIWHYHGGCHVGAVV 535
Query: 158 DSRLRVHGVTGLRVVDASVMPTITSGNTYAPVVMI 54
D RV GV GLRVVD+S N A V+M+
Sbjct: 536 DQDYRVLGVRGLRVVDSSTFKYSPGTNPQATVMML 570
>02_05_0304 +
27721413-27721479,27721561-27722208,27722399-27723371,
27724196-27724237,27724379-27724466,27724911-27725016,
27726499-27726614
Length = 679
Score = 50.8 bits (116), Expect = 8e-07
Identities = 42/157 (26%), Positives = 69/157 (43%), Gaps = 10/157 (6%)
Frame = -1
Query: 494 FSLITLLHPESRGKISLKSSNPEDPPIIYSGYFTNENDLDNFARYLENFNTVINSTHFKE 315
F L +L P+S G+++L++ +P+D P + YF++ +DL A + VI S F
Sbjct: 409 FILEKVLGPQSTGRLALRNLDPDDNPTVSFNYFSHPDDLRRCAAGIATIERVIRSRAFSR 468
Query: 314 L--KSQVVDLKVTQCRQWPF------GSHEYWAC--YALNLASTQYHTVGTCAMGDKHIG 165
+ + ++P G + A + + T +H G C +G
Sbjct: 469 FAYPNFAFPATINVTAEFPANLMRMRGGSDPRALEQFCRDTVMTIWHYHGGCQVG----R 524
Query: 164 VVDSRLRVHGVTGLRVVDASVMPTITSGNTYAPVVMI 54
VVD RV G+ LRV+D S N A V+M+
Sbjct: 525 VVDRDYRVLGIEALRVIDGSTFNASPGTNPQATVMML 561
>04_04_0862 +
28843654-28844386,28844486-28844895,28844995-28845560,
28845737-28845803
Length = 591
Score = 47.2 bits (107), Expect = 1e-05
Identities = 46/173 (26%), Positives = 69/173 (39%), Gaps = 9/173 (5%)
Frame = -1
Query: 494 FSLITLLHPESRGKISLKSSNPEDPPIIYSGYFTNENDLDNFARYLENFNTVINSTHFKE 315
F L +L P S G + L++ NP+D P + YF + DL + VI S F
Sbjct: 417 FILEKILGPLSTGHLELRNRNPDDNPSVTFNYFAHPEDLRRCVAGVSVIERVIRSEAFAN 476
Query: 314 LKSQV--VDLKVTQCRQWPFG---SHEYWAC----YALNLASTQYHTVGTCAMGDKHIGV 162
V+ + +P H+ + + + T +H G C + V
Sbjct: 477 FTYPYFSVETLLNMTAGFPVNLRPRHDNDSTSLEQFCKDTVMTIWHYHGGCQVN----RV 532
Query: 161 VDSRLRVHGVTGLRVVDASVMPTITSGNTYAPVVMIAEKAADMIKIDHGXLEN 3
VD+ RV GV LRV+D S N A V+M+ +KI + L N
Sbjct: 533 VDAEYRVIGVDALRVIDGSTFNASPGTNPQATVMMLGRYMG--VKIQNERLGN 583
>09_03_0047 -
11867302-11867356,11867461-11868032,11868485-11868873,
11869018-11869331,11871028-11871382,11872004-11872076
Length = 585
Score = 42.7 bits (96), Expect = 2e-04
Identities = 41/159 (25%), Positives = 68/159 (42%), Gaps = 12/159 (7%)
Frame = -1
Query: 470 PESRGKISLKSSNPEDPPIIYSGYFTNENDLDNFARYLENFNTVINSTHFKELKS----- 306
P S G ++L ++ + P + YF++ DL ++ ++ + F EL +
Sbjct: 421 PLSTGHLALIDTDVKKNPAVTFNYFSHPQDLTRCVYGIKTIERILKTNRFSELSANTDGH 480
Query: 305 ---QVVDLKVTQCRQWPFGSH----EYWACYALNLASTQYHTVGTCAMGDKHIGVVDSRL 147
+V+++ V Q H E + + T +H G C +G VVD +
Sbjct: 481 SMERVLNMSV-QANVNLIPKHTNDTESLEQFCRDTVITIWHYHGGCHVGK----VVDQQH 535
Query: 146 RVHGVTGLRVVDASVMPTITSGNTYAPVVMIAEKAADMI 30
RV GV+G+RVVD S N A V+M+ MI
Sbjct: 536 RVLGVSGVRVVDGSTFSRSPGTNPQATVMMMGRYFGVMI 574
>08_02_0598 -
19149218-19149524,19150325-19150896,19151374-19151762,
19151850-19152163,19152312-19152356,19153451-19153805,
19154361-19154430
Length = 683
Score = 41.9 bits (94), Expect = 4e-04
Identities = 39/158 (24%), Positives = 67/158 (42%), Gaps = 11/158 (6%)
Frame = -1
Query: 494 FSLITLLHPESRGKISLKSSNPEDPPIIYSGYFTNENDLDNFARYLENFNTVINSTHFKE 315
F L + P S G + L ++ P + YF + DL ++ ++ + HF
Sbjct: 427 FILSKIDGPLSTGNLVLVDTDINSNPTVTFNYFQHPKDLSRCVYGIKTIERILKTNHFTN 486
Query: 314 LKSQ--------VVDLKVT-QCRQWPFGSHEYWAC--YALNLASTQYHTVGTCAMGDKHI 168
V+++ VT P +++ + + + T +H G C +G
Sbjct: 487 FTLNGGGYPMEVVLNMSVTANINLIPKHTNDSTSMEQFCRDTVVTIWHYHGGCHVGK--- 543
Query: 167 GVVDSRLRVHGVTGLRVVDASVMPTITSGNTYAPVVMI 54
VVD + RV GV+GLRV+D S + N A V+M+
Sbjct: 544 -VVDQQYRVIGVSGLRVIDGSTLFRSPGTNPQATVMMM 580
>06_03_0980 +
26520832-26520922,26521021-26521409,26521612-26521927,
26522869-26523769,26524103-26524184
Length = 592
Score = 39.1 bits (87), Expect = 0.003
Identities = 39/151 (25%), Positives = 54/151 (35%), Gaps = 12/151 (7%)
Frame = -1
Query: 470 PESRGKISLKSSNPEDPPIIYSGYFTNENDLDNFARYLENFNTVINSTHFKELKSQVVDL 291
P S G + L SSNP + P + Y + DL + V+ ST +S + L
Sbjct: 419 PLSEGSLWLTSSNPLESPSVRFNYLSRREDLARCVTGMRRVAKVLESTTMDVFRSAMGSL 478
Query: 290 KVTQCRQ------------WPFGSHEYWACYALNLASTQYHTVGTCAMGDKHIGVVDSRL 147
R+ W + +T +H G C G VVD
Sbjct: 479 SQDSRRREFRIVGAALPVDWRTNDTAL-GDFCQQTVATLWHYHGGCVAGS----VVDRDF 533
Query: 146 RVHGVTGLRVVDASVMPTITSGNTYAPVVMI 54
RV V LRVVD S N A ++M+
Sbjct: 534 RVFRVRALRVVDGSTFRETPGTNPQATIMMM 564
>01_06_0116 -
26595570-26596607,26596964-26598353,26599386-26599923,
26600562-26601453
Length = 1285
Score = 29.9 bits (64), Expect = 1.6
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = -3
Query: 348 QHGHQQYTLQRTEVSSGRSKGDAMSAMAFWKSRVLGLLCP*FSQHTVP 205
Q G +++ +R ++SSGR G A + W S V P QH VP
Sbjct: 664 QSGDRRFHQKRNDMSSGRGHGHAWNNPPSWPSPVANGFVP--MQHGVP 709
>02_04_0656 -
24769069-24770814,24771552-24771608,24773307-24773582,
24773675-24773965
Length = 789
Score = 29.1 bits (62), Expect = 2.9
Identities = 18/53 (33%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Frame = -1
Query: 206 HTVGTCAMG-DKHIGVVDSRLRVHGVTGLRVVDASVMPTITSGNTYAPVVMIA 51
H +G+C MG G VD+R L V D SV+PT N + +A
Sbjct: 721 HHMGSCRMGATAGDGAVDARGESWEAERLYVCDGSVLPTAVGVNPMITIQSVA 773
>11_06_0221 - 21387365-21387652,21387892-21389952,21390360-21390395
Length = 794
Score = 28.3 bits (60), Expect = 5.0
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +2
Query: 131 SHRELLTSSLPPLYVYRPWR 190
S R L+SS PP+ ++ PWR
Sbjct: 768 SKRSWLSSSFPPILIWLPWR 787
>05_02_0033 +
5847754-5847982,5848308-5848437,5849038-5849116,
5849194-5849251,5849732-5850795,5850899-5851003,
5851369-5851473
Length = 589
Score = 28.3 bits (60), Expect = 5.0
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +2
Query: 158 LPPLYVYRPWRKSLRYGTV 214
LPP Y+ + W + RYGT+
Sbjct: 375 LPPHYILKRWTQEARYGTI 393
>03_05_0826 - 27994004-27994966,27995053-27996030,27996101-27996478
Length = 772
Score = 28.3 bits (60), Expect = 5.0
Identities = 20/54 (37%), Positives = 24/54 (44%)
Frame = -3
Query: 324 LQRTEVSSGRSKGDAMSAMAFWKSRVLGLLCP*FSQHTVPYRRDLRHGR*TYRG 163
L RT+ SSG S + S S V+G C F TVP LR T+ G
Sbjct: 503 LIRTKGSSGMSLAERFSLTLSRSSLVVGRSCVEFEPETVPLLSTLRGKPITFLG 556
>11_01_0550 +
4355857-4356051,4357287-4357355,4357429-4357561,
4358248-4358454,4358601-4358716,4358814-4358918,
4359008-4359180,4359273-4359363,4359682-4359831,
4359928-4360173
Length = 494
Score = 27.9 bits (59), Expect = 6.7
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = -1
Query: 356 ENFNTVINSTHFKELKSQVVDLKVTQ 279
E+ + ++NS HF+ L + + D KV Q
Sbjct: 295 EDLSRIVNSNHFRRLTNLIEDKKVAQ 320
>03_06_0273 +
32787021-32787434,32788096-32788221,32788305-32788378,
32788468-32788537,32788622-32788677,32788762-32788833,
32788945-32789039,32789196-32789262,32789359-32789488,
32789578-32789793,32789887-32790017,32790719-32790893,
32790977-32791067,32792151-32792308,32792763-32792951,
32793066-32793125
Length = 707
Score = 27.9 bits (59), Expect = 6.7
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = +2
Query: 110 RPPLEDLSHRELLTSSLPPLYVYRPWRKSLRYGTVCW 220
R P+++ + L TSS P +V W K+L ++C+
Sbjct: 667 RKPMDE-TQETLRTSSFPSNHVKEKWSKNLYIASICY 702
>01_01_0691 -
5328169-5328228,5328300-5328488,5328611-5328768,
5329677-5329767,5330359-5330438,5330472-5330533,
5330603-5330730,5331290-5331508,5331586-5331715,
5331804-5331870,5331968-5332062,5332150-5332221,
5332307-5332362,5332485-5332554,5332662-5332735,
5332820-5332954,5334135-5334314
Length = 621
Score = 27.9 bits (59), Expect = 6.7
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +2
Query: 125 DLSHRELLTSSLPPLYVYRPWRKSLRYGTVCW 220
D + L TS+ P +V W K+L G++C+
Sbjct: 585 DETQETLRTSAFPGQHVKEKWAKNLYLGSICY 616
>07_03_0919 -
22594980-22595111,22595398-22595427,22595522-22595587,
22596021-22596107,22596868-22596921,22597696-22597762,
22598099-22598215,22598536-22598637,22598784-22598902,
22598966-22599049,22599220-22599354,22599470-22599505,
22599581-22599700,22600557-22600645,22601507-22601596,
22601629-22601802,22602135-22602235,22602323-22602363,
22602872-22602883
Length = 551
Score = 27.5 bits (58), Expect = 8.8
Identities = 14/22 (63%), Positives = 15/22 (68%), Gaps = 2/22 (9%)
Frame = -1
Query: 197 GTCAMGD--KHIGVVDSRLRVH 138
G CA GD K+IGVVDS VH
Sbjct: 443 GYCAQGDRTKNIGVVDSEYIVH 464
>05_05_0375 + 24486056-24487333
Length = 425
Score = 27.5 bits (58), Expect = 8.8
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = -1
Query: 302 VVDLKVTQCRQWP 264
VVDL VT C QWP
Sbjct: 154 VVDLSVTHCMQWP 166
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,971,701
Number of Sequences: 37544
Number of extensions: 321012
Number of successful extensions: 850
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 826
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 850
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1454766756
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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