Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P28_pT_L04
(724 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 29 0.050
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 29 0.050
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 29 0.050
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 29 0.050
AY618898-1|AAU87291.1| 803|Tribolium castaneum receptor tyrosin... 23 2.5
EU019711-1|ABU25223.1| 534|Tribolium castaneum chitin deacetyla... 21 7.6
AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax pr... 21 7.6
AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax pr... 21 7.6
AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax pr... 21 7.6
AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax pr... 21 7.6
AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax pr... 21 7.6
AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax pr... 21 7.6
AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein. 21 7.6
AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduce... 21 7.6
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 28.7 bits (61), Expect = 0.050
Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = -3
Query: 185 IFLVLILRQYV-LKLVSWHLESAV*K*QMRTSRNQRKVSYTARRKAHQKDFI 33
++L+LIL + L +VSW K + ++K + A+RKA QK +
Sbjct: 1042 MYLLLILYSIINLNVVSWGTREVAVKKTKKELEEEKKQAEEAKRKAKQKSLL 1093
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 28.7 bits (61), Expect = 0.050
Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = -3
Query: 185 IFLVLILRQYV-LKLVSWHLESAV*K*QMRTSRNQRKVSYTARRKAHQKDFI 33
++L+LIL + L +VSW K + ++K + A+RKA QK +
Sbjct: 1042 MYLLLILYSIINLNVVSWGTREVAVKKTKKELEEEKKQAEEAKRKAKQKSLL 1093
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
protein.
Length = 1558
Score = 28.7 bits (61), Expect = 0.050
Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = -3
Query: 185 IFLVLILRQYV-LKLVSWHLESAV*K*QMRTSRNQRKVSYTARRKAHQKDFI 33
++L+LIL + L +VSW K + ++K + A+RKA QK +
Sbjct: 1042 MYLLLILYSIINLNVVSWGTREVAVKKTKKELEEEKKQAEEAKRKAKQKSLL 1093
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
protein.
Length = 1558
Score = 28.7 bits (61), Expect = 0.050
Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = -3
Query: 185 IFLVLILRQYV-LKLVSWHLESAV*K*QMRTSRNQRKVSYTARRKAHQKDFI 33
++L+LIL + L +VSW K + ++K + A+RKA QK +
Sbjct: 1042 MYLLLILYSIINLNVVSWGTREVAVKKTKKELEEEKKQAEEAKRKAKQKSLL 1093
>AY618898-1|AAU87291.1| 803|Tribolium castaneum receptor tyrosine
kinase Torso-likeprotein protein.
Length = 803
Score = 23.0 bits (47), Expect = 2.5
Identities = 16/59 (27%), Positives = 26/59 (44%)
Frame = +3
Query: 354 GLWP*SPSHLLLNQNHQVDSIIPTWSFEFPFHHQSLNHNV*CLLHQFHQ*KRLKVHVPQ 530
GL + + L L +N+ V + + S F +SLN L FH ++ + PQ
Sbjct: 214 GLHEATLTDLALGENYTVQIMAKSESSPFESLKKSLNFRTPSCLETFHTLEKCRPDPPQ 272
>EU019711-1|ABU25223.1| 534|Tribolium castaneum chitin deacetylase
1 protein.
Length = 534
Score = 21.4 bits (43), Expect = 7.6
Identities = 6/11 (54%), Positives = 7/11 (63%)
Frame = -1
Query: 634 CKPDICYLPTC 602
C P +C LP C
Sbjct: 163 CDPAVCVLPDC 173
>AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 21.4 bits (43), Expect = 7.6
Identities = 17/60 (28%), Positives = 26/60 (43%)
Frame = +2
Query: 278 SSGKGNSIFLSIRPGRISAGSKVSIRFVAMITFTSPLESKPSS*FNNSNMVL*ISLSPPE 457
SSG + + +S P A S S + + TS S + NN+N S +PP+
Sbjct: 140 SSGLTSPLSVSTSPPGKPATSTTSQNLSSPASSTSSTSSTEKAGTNNNNSKSSQSSNPPQ 199
>AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 21.4 bits (43), Expect = 7.6
Identities = 17/60 (28%), Positives = 26/60 (43%)
Frame = +2
Query: 278 SSGKGNSIFLSIRPGRISAGSKVSIRFVAMITFTSPLESKPSS*FNNSNMVL*ISLSPPE 457
SSG + + +S P A S S + + TS S + NN+N S +PP+
Sbjct: 140 SSGLTSPLSVSTSPPGKPATSTASQNLSSPASSTSSTSSTEKAGTNNNNSKSGQSSNPPQ 199
>AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax
protein.
Length = 230
Score = 21.4 bits (43), Expect = 7.6
Identities = 17/60 (28%), Positives = 26/60 (43%)
Frame = +2
Query: 278 SSGKGNSIFLSIRPGRISAGSKVSIRFVAMITFTSPLESKPSS*FNNSNMVL*ISLSPPE 457
SSG + + +S P A S S + + TS S + NN+N S +PP+
Sbjct: 140 SSGLTSPLSVSTSPPGKPATSTASQNLSSPASSTSSTSSTEKAGTNNNNSKSGQSSNPPQ 199
>AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 21.4 bits (43), Expect = 7.6
Identities = 17/60 (28%), Positives = 26/60 (43%)
Frame = +2
Query: 278 SSGKGNSIFLSIRPGRISAGSKVSIRFVAMITFTSPLESKPSS*FNNSNMVL*ISLSPPE 457
SSG + + +S P A S S + + TS S + NN+N S +PP+
Sbjct: 140 SSGLTSPLSVSTSPPGKPATSTASQNLSSPASSTSSTSSTEKAGTNNNNSKSGQSSNPPQ 199
>AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax
protein.
Length = 297
Score = 21.4 bits (43), Expect = 7.6
Identities = 17/60 (28%), Positives = 26/60 (43%)
Frame = +2
Query: 278 SSGKGNSIFLSIRPGRISAGSKVSIRFVAMITFTSPLESKPSS*FNNSNMVL*ISLSPPE 457
SSG + + +S P A S S + + TS S + NN+N S +PP+
Sbjct: 140 SSGLTSPLSVSTSPPGKPATSTASQNLSSPASSTSSTSSTEKAGTNNNNSKSGQSSNPPQ 199
>AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax
protein.
Length = 268
Score = 21.4 bits (43), Expect = 7.6
Identities = 17/60 (28%), Positives = 26/60 (43%)
Frame = +2
Query: 278 SSGKGNSIFLSIRPGRISAGSKVSIRFVAMITFTSPLESKPSS*FNNSNMVL*ISLSPPE 457
SSG + + +S P A S S + + TS S + NN+N S +PP+
Sbjct: 96 SSGLTSPLSVSTSPPGKPATSTASQNLSSPASSTSSTSSTEKAGTNNNNSKSGQSSNPPQ 155
>AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein.
Length = 312
Score = 21.4 bits (43), Expect = 7.6
Identities = 17/60 (28%), Positives = 26/60 (43%)
Frame = +2
Query: 278 SSGKGNSIFLSIRPGRISAGSKVSIRFVAMITFTSPLESKPSS*FNNSNMVL*ISLSPPE 457
SSG + + +S P A S S + + TS S + NN+N S +PP+
Sbjct: 140 SSGLTSPLSVSTSPPGKPATSTASQNLSSPASSTSSTSSTEKAGTNNNNSKSGQSSNPPQ 199
>AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduced
Scr protein.
Length = 312
Score = 21.4 bits (43), Expect = 7.6
Identities = 17/60 (28%), Positives = 26/60 (43%)
Frame = +2
Query: 278 SSGKGNSIFLSIRPGRISAGSKVSIRFVAMITFTSPLESKPSS*FNNSNMVL*ISLSPPE 457
SSG + + +S P A S S + + TS S + NN+N S +PP+
Sbjct: 140 SSGLTSPLSVSTSPPGKPATSTASQNLSSPASSTSSTSSTEKAGTNNNNSKSGQSSNPPQ 199
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 179,868
Number of Sequences: 336
Number of extensions: 3890
Number of successful extensions: 15
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19259425
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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