Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P28_pT_L04
(724 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC4.07c |rpt2|mts2|19S proteasome regulatory subunit Rpt2|Schi... 371 e-104
SPBC23G7.12c |rpt6|let1|19S proteasome regulatory subunit Rpt6|S... 279 3e-76
SPAC3A11.12c |rpt5|pam2, tbp1|19S proteasome regulatory subunit ... 272 4e-74
SPCC576.10c |rpt3||19S proteasome regulatory subunit Rpt3|Schizo... 268 5e-73
SPBC16C6.07c |rpt1||19S proteasome regulatory subunit Rpt1|Schiz... 257 1e-69
SPCC1682.16 |rpt4||19S proteasome regulatory subunit Rpt4|Schizo... 246 2e-66
SPAC1565.08 |cdc48|SPAC6F12.01|AAA family ATPase Cdc48|Schizosac... 186 3e-48
SPBC543.09 |||mitochondrial m-AAA protease|Schizosaccharomyces p... 185 7e-48
SPBC56F2.07c |||AAA family ATPase, unknown biological role|Schiz... 180 2e-46
SPCC965.04c |||mitochondrial inner membrane i-AAA protease compl... 173 3e-44
SPBC16E9.10c |||AAA family ATPase Rix7 |Schizosaccharomyces pomb... 166 2e-42
SPBP22H7.05c |||ATPase with bromodomain protein|Schizosaccharomy... 150 2e-37
SPAC31G5.19 |||ATPase with bromodomain protein|Schizosaccharomyc... 149 3e-37
SPAC17A5.01 |pex6||peroxin-6 |Schizosaccharomyces pombe|chr 1|||... 146 2e-36
SPAC1834.11c |sec18||secretory pathway protein Sec18 |Schizosacc... 138 7e-34
SPAC2G11.06 |vps4||AAA family ATPase Vps4|Schizosaccharomyces po... 136 4e-33
SPCC553.03 |pex1||AAA family ATPase Pex1 |Schizosaccharomyces po... 129 5e-31
SPCC24B10.10c |||mitochondrial outer membrane ATPase Msp1 |Schiz... 120 3e-28
SPBC947.01 |||AAA family ATPase, unknown biological role|Schizos... 119 5e-28
SPAC328.04 |||AAA family ATPase, unknown biological role|Schizos... 110 2e-25
SPAC644.07 |||Rieske ISP assembly protein|Schizosaccharomyces po... 77 3e-15
SPAC22F3.06c |lon1||Lon protease homolog Lon1|Schizosaccharomyce... 42 1e-04
SPAPB8E5.09 |||AAA family ATPase Rvb1 |Schizosaccharomyces pombe... 33 0.041
SPBC16D10.08c |||heat shock protein Hsp104 |Schizosaccharomyces ... 32 0.095
SPAC26H5.02c |||DNA replication ATPase|Schizosaccharomyces pombe... 32 0.095
SPBC23E6.07c |rfc1||DNA replication factor C complex subunit Rfc... 31 0.13
SPAC27E2.10c |rfc3|SPAPJ698.01c|DNA replication factor C complex... 31 0.13
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 31 0.17
SPBC31E1.06 |bms1|SPBC800.01|GTP binding protein Bms1|Schizosacc... 31 0.17
SPCC1442.07c |||ubiquitin/metalloprotease fusion protein|Schizos... 31 0.22
SPCC830.11c |||adenylate kinase |Schizosaccharomyces pombe|chr 3... 30 0.29
SPBC83.08 |||AAA family ATPase Rvb2 |Schizosaccharomyces pombe|c... 29 0.67
SPAP11E10.02c |mam3|SPAPB1A10.01c|cell agglutination protein Mam... 28 1.2
SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr 1||... 28 1.2
SPBC4F6.17c |||mitochondrial matrix chaperone Hsp78 |Schizosacch... 28 1.2
SPAC4G9.12 |||gluconokinase|Schizosaccharomyces pombe|chr 1|||Ma... 28 1.6
SPBC115.02c |||AFG1 family mitochondrial ATPase|Schizosaccharomy... 27 2.1
SPBPB10D8.02c |||arylsulfatase |Schizosaccharomyces pombe|chr 2|... 27 2.7
SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal protein... 27 3.6
SPBC216.06c |swi1||replication fork protection complex subunit S... 27 3.6
SPCC1919.11 |mug137||BAR adaptor protein|Schizosaccharomyces pom... 27 3.6
SPBC14F5.10c |||ubiquitin-protein ligase E3 |Schizosaccharomyces... 27 3.6
SPAC1F3.09 |mug161||CwfJ family protein|Schizosaccharomyces pomb... 26 4.7
SPAC16C9.06c |upf1||ATP-dependent RNA helicase Upf1|Schizosaccha... 26 4.7
SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces pombe... 26 4.7
SPAC1952.10c |||conserved fungal protein |Schizosaccharomyces po... 26 6.3
SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain |Schizosaccha... 26 6.3
SPAC27F1.02c |cdc8|fus4|tropomyosin|Schizosaccharomyces pombe|ch... 25 8.3
SPCC737.07c |||DNA polymerase alpha-associated DNA helicase A |S... 25 8.3
SPBPB8B6.04c |grt1|SPAPB8B6.04c, SPAPB8B6.04c|transcription fact... 25 8.3
>SPBC4.07c |rpt2|mts2|19S proteasome regulatory subunit
Rpt2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 448
Score = 371 bits (912), Expect = e-104
Identities = 183/232 (78%), Positives = 203/232 (87%), Gaps = 2/232 (0%)
Frame = -2
Query: 720 YEXMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVREL 541
YE MGIKPPKGVILYG PGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGP+LVR+L
Sbjct: 217 YEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPRLVRQL 276
Query: 540 FRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFD-SRGDVKVIM 364
F AEEH+PSIVFIDEIDA+GTKRYD+ SG EREIQRTMLELLNQLDGFD S+ D+KVIM
Sbjct: 277 FNAAEEHSPSIVFIDEIDAIGTKRYDAQSGAEREIQRTMLELLNQLDGFDTSQRDIKVIM 336
Query: 363 ATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFTIHTSRMTLADDVNLSELIMSKDD 184
ATNRI LDPALIRPGRIDRKI F PDE TKR+IFTIHTS+M L +DVNL ELI KDD
Sbjct: 337 ATNRISDLDPALIRPGRIDRKILFENPDEATKRKIFTIHTSKMNLGEDVNLEELIQCKDD 396
Query: 183 LSGADIKAICTEAGLMALRERRMKVTNEDFKKSKESVLYRKKEGTPE-GLYL 31
LSGA+IKAI +EAGL+ALRERRM+V +DF++++E VL K EG P GLY+
Sbjct: 397 LSGAEIKAIVSEAGLLALRERRMRVVMDDFRQAREKVLKTKDEGGPAGGLYI 448
>SPBC23G7.12c |rpt6|let1|19S proteasome regulatory subunit
Rpt6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 403
Score = 279 bits (684), Expect = 3e-76
Identities = 129/224 (57%), Positives = 171/224 (76%), Gaps = 1/224 (0%)
Frame = -2
Query: 720 YEXMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVREL 541
+E +GI PKG++LYGPPGTGKTLLA+AVA+ T F+RV GSEL+QKY+G+G ++VREL
Sbjct: 171 FESLGIPQPKGILLYGPPGTGKTLLARAVAHHTDCKFIRVSGSELVQKYIGEGSRMVREL 230
Query: 540 FRVAEEHAPSIVFIDEIDAVGTKRYDSNSG-GEREIQRTMLELLNQLDGFDSRGDVKVIM 364
F +A EHAPSI+F+DEID++G+ R DS+ G G+ E+QRTMLELLNQLDGF++ ++KVIM
Sbjct: 231 FVMAREHAPSIIFMDEIDSIGSSRSDSSGGSGDSEVQRTMLELLNQLDGFEATKNIKVIM 290
Query: 363 ATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFTIHTSRMTLADDVNLSELIMSKDD 184
ATNRI+ LDPAL+RPGRIDRKIEFP P + + I IH+ M L ++L + +
Sbjct: 291 ATNRIDILDPALLRPGRIDRKIEFPPPSAEARAEILRIHSRSMNLTRGIDLKSIAEKMNG 350
Query: 183 LSGADIKAICTEAGLMALRERRMKVTNEDFKKSKESVLYRKKEG 52
SGA++K +CTEAG+ ALRERR+ VT EDF+ + VL + G
Sbjct: 351 ASGAELKGVCTEAGMFALRERRVHVTQEDFELAVAKVLNKGDSG 394
>SPAC3A11.12c |rpt5|pam2, tbp1|19S proteasome regulatory subunit
Rpt5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 438
Score = 272 bits (666), Expect = 4e-74
Identities = 121/222 (54%), Positives = 170/222 (76%)
Frame = -2
Query: 720 YEXMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVREL 541
+ +G+KPPKG +++GPPGTGKTLLA+A A Q++ATFL++ +L+Q ++GDG KLVR+
Sbjct: 211 FRKLGVKPPKGCLMFGPPGTGKTLLARACAAQSNATFLKLAAPQLVQMFIGDGAKLVRDA 270
Query: 540 FRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMA 361
F +A+E +P+I+FIDE+DA+GTKR+DS G+RE+QRTMLELLNQLDGF S VKVI A
Sbjct: 271 FALAKEKSPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFSSDDRVKVIAA 330
Query: 360 TNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFTIHTSRMTLADDVNLSELIMSKDDL 181
TNR++TLDPAL+R GR+DRK+EFPLP+E+ + I IH+ +M + DD+N EL S D+
Sbjct: 331 TNRVDTLDPALLRSGRLDRKLEFPLPNEEARVGILRIHSRKMAIDDDINWEELARSTDEY 390
Query: 180 SGADIKAICTEAGLMALRERRMKVTNEDFKKSKESVLYRKKE 55
+GA +K++C EAG++ALR+ K+ +E F V RK +
Sbjct: 391 NGAMLKSVCVEAGMIALRQGDTKINHEHFMDGILEVQMRKSK 432
>SPCC576.10c |rpt3||19S proteasome regulatory subunit
Rpt3|Schizosaccharomyces pombe|chr 3|||Manual
Length = 389
Score = 268 bits (657), Expect = 5e-73
Identities = 122/213 (57%), Positives = 167/213 (78%), Gaps = 1/213 (0%)
Frame = -2
Query: 720 YEXMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVREL 541
Y +GI PP+GV+LYGPPGTGKT+L KAVAN T+A F+RVVGSE +QKYLG+GP++VR++
Sbjct: 160 YRQIGIDPPRGVLLYGPPGTGKTMLVKAVANSTAANFIRVVGSEFVQKYLGEGPRMVRDV 219
Query: 540 FRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMA 361
FR+A E+AP+I+FIDEIDA+ TKR+D+ +G +RE+QR ++ELL Q+DGFD +VKVIMA
Sbjct: 220 FRMARENAPAIIFIDEIDAIATKRFDAQTGADREVQRILIELLTQMDGFDQGANVKVIMA 279
Query: 360 TNRIETLDPALIRPGRIDRKIEFP-LPDEKTKRRIFTIHTSRMTLADDVNLSELIMSKDD 184
TNR +TLDPAL+RPGR+DRKIEFP D + +R +F T++M L+ +V+L IM D
Sbjct: 280 TNRADTLDPALLRPGRLDRKIEFPSYRDRRQRRLVFQTITAKMLLSPEVDLDTFIMRPDA 339
Query: 183 LSGADIKAICTEAGLMALRERRMKVTNEDFKKS 85
SGA I AI +AGL+A+R+ R + D +++
Sbjct: 340 SSGAQIAAIMQDAGLLAVRKSRGVILQSDIEEA 372
>SPBC16C6.07c |rpt1||19S proteasome regulatory subunit
Rpt1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 438
Score = 257 bits (630), Expect = 1e-69
Identities = 118/231 (51%), Positives = 164/231 (70%)
Frame = -2
Query: 711 MGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRV 532
+GI PPKG++LYGPPGTGKTL A+AVAN+T ATF+RV+GSEL+QKY+G+G ++VRELF +
Sbjct: 208 LGIDPPKGIMLYGPPGTGKTLCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEM 267
Query: 531 AEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNR 352
A I+F DEIDA+G R+D +GG+ E+QRTMLEL+ QLDGFD RG++KV+ ATNR
Sbjct: 268 ARTKKACIIFFDEIDAIGGARFDDGAGGDNEVQRTMLELITQLDGFDPRGNIKVLFATNR 327
Query: 351 IETLDPALIRPGRIDRKIEFPLPDEKTKRRIFTIHTSRMTLADDVNLSELIMSKDDLSGA 172
TLD AL+RPGRIDRK+EF LPD + + I IH M + D+ + +GA
Sbjct: 328 PNTLDEALMRPGRIDRKVEFGLPDLEGRAHILRIHAKSMAIDKDIRWELIARLCPSQTGA 387
Query: 171 DIKAICTEAGLMALRERRMKVTNEDFKKSKESVLYRKKEGTPEGLYL*MYS 19
+++++CTEAG+ A+R RR T +DF + + V+ ++ + Y+ M S
Sbjct: 388 ELRSVCTEAGMFAIRARRRVATEKDFLDAVQKVVKGNQKFSSTADYMNMSS 438
>SPCC1682.16 |rpt4||19S proteasome regulatory subunit
Rpt4|Schizosaccharomyces pombe|chr 3|||Manual
Length = 388
Score = 246 bits (603), Expect = 2e-66
Identities = 112/222 (50%), Positives = 157/222 (70%), Gaps = 1/222 (0%)
Frame = -2
Query: 711 MGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRV 532
+GIKPPKGV+LYGPPGTGKTLLA+AVA FL+VV S ++ KY+G+ +++RE+F
Sbjct: 161 VGIKPPKGVLLYGPPGTGKTLLARAVAASLGVNFLKVVSSAIVDKYIGESARIIREMFGY 220
Query: 531 AEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNR 352
A+EH P ++F+DEIDA+G +R+ + +REIQRT++ELLNQ+DGFD G K+IMATNR
Sbjct: 221 AKEHEPCVIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDYLGQTKIIMATNR 280
Query: 351 IETLDPALIRPGRIDRKIEFPLPDEKTKRRIFTIHTSRMTLADDVNLSELIMSKDDLSGA 172
+TLDPAL+RPGR+DRKIE PLP+E + I IH +++ +++ L+ D +GA
Sbjct: 281 PDTLDPALLRPGRLDRKIEIPLPNEVGRMEILKIHLEKVSKQGEIDYEALVKLTDGTNGA 340
Query: 171 DIKAICTEAGLMALRERRMKVTNEDFKKSKESVLYRKK-EGT 49
D++ + TEAG +A++E R V D + V KK EGT
Sbjct: 341 DLRNVVTEAGFIAIKEDRDYVIQSDLMSAARKVADLKKLEGT 382
>SPAC1565.08 |cdc48|SPAC6F12.01|AAA family ATPase
Cdc48|Schizosaccharomyces pombe|chr 1|||Manual
Length = 815
Score = 186 bits (453), Expect = 3e-48
Identities = 87/200 (43%), Positives = 136/200 (68%)
Frame = -2
Query: 720 YEXMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVREL 541
++ +GIKPP+G+++YGPPGTGKTL+A+AVAN+T A F + G E++ K G+ +R+
Sbjct: 250 FKSIGIKPPRGILMYGPPGTGKTLMARAVANETGAFFFLINGPEIMSKMAGESESNLRKA 309
Query: 540 FRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMA 361
F AE+++P+I+FIDEID++ KR +N GE E +R + +LL +DG +R +V V+ A
Sbjct: 310 FEEAEKNSPAIIFIDEIDSIAPKREKTN--GEVE-RRVVSQLLTLMDGMKARSNVVVMAA 366
Query: 360 TNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFTIHTSRMTLADDVNLSELIMSKDDL 181
TNR ++DPAL R GR DR+++ +PD + I IHT M LADDV+L ++
Sbjct: 367 TNRPNSIDPALRRFGRFDREVDVGIPDPTGRLEILRIHTKNMKLADDVDLEQIAAETHGY 426
Query: 180 SGADIKAICTEAGLMALRER 121
G+D+ ++C+EA + +RE+
Sbjct: 427 VGSDLASLCSEAAMQQIREK 446
Score = 166 bits (403), Expect = 3e-42
Identities = 84/211 (39%), Positives = 131/211 (62%)
Frame = -2
Query: 708 GIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVA 529
G+ P KGV+ +GPPGTGKTLLAKA+AN+ SA F+ V G EL+ + G+ VR++F A
Sbjct: 527 GVTPSKGVLFFGPPGTGKTLLAKAIANECSANFISVKGPELLSMWFGESESNVRDIFDKA 586
Query: 528 EEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRI 349
AP +VF+DE+D++ R +++G R + +LL ++DG +S+ +V VI ATNR
Sbjct: 587 RAAAPCVVFLDELDSIAKAR-GASAGDSGGGDRVVNQLLTEMDGVNSKKNVFVIGATNRP 645
Query: 348 ETLDPALIRPGRIDRKIEFPLPDEKTKRRIFTIHTSRMTLADDVNLSELIMSKDDLSGAD 169
+ +DPAL+RPGR+D+ I PLPDE+ + I +A+DV+L + + SGAD
Sbjct: 646 DQIDPALMRPGRLDQLIYVPLPDEEARFSILQTQLRHTPVAEDVDLRAVAKATHGFSGAD 705
Query: 168 IKAICTEAGLMALRERRMKVTNEDFKKSKES 76
++ + A +A+++ ED K+ E+
Sbjct: 706 LEFVVQRAVKLAIKDS----IEEDIKRENET 732
>SPBC543.09 |||mitochondrial m-AAA protease|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 773
Score = 185 bits (450), Expect = 7e-48
Identities = 95/220 (43%), Positives = 133/220 (60%), Gaps = 3/220 (1%)
Frame = -2
Query: 723 YYEXMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRE 544
+YE +G K P+G IL GPPGTGKTLLAKA A + + FL V GSE ++ ++G GP VR+
Sbjct: 320 FYERLGAKIPRGAILSGPPGTGKTLLAKATAGEANVPFLSVSGSEFLEMFVGVGPSRVRD 379
Query: 543 LFRVAEEHAPSIVFIDEIDAVGTKR-YDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVI 367
LF A ++AP I+FIDEIDA+G R G E + T+ +LL ++DGF S + V
Sbjct: 380 LFATARKNAPCIIFIDEIDAIGKARGRGGQFGSNDERESTLNQLLVEMDGFTSSEHIVVF 439
Query: 366 MATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFTIHTSRMTLADDVNL--SELIMS 193
TNR + LDPAL+RPGR DR+I PD + +IF +H + AD+++L L +
Sbjct: 440 AGTNRPDVLDPALLRPGRFDRQITIDRPDIGGREQIFKVHLKHIKAADNIDLIAKRLAVL 499
Query: 192 KDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKESV 73
+GADI +C E L+A R +V F+++ E V
Sbjct: 500 TSGFTGADIMNVCNEGALIAARSNSNEVQMVHFEQAIERV 539
>SPBC56F2.07c |||AAA family ATPase, unknown biological
role|Schizosaccharomyces pombe|chr 2|||Manual
Length = 809
Score = 180 bits (437), Expect = 2e-46
Identities = 83/199 (41%), Positives = 131/199 (65%)
Frame = -2
Query: 720 YEXMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVREL 541
+ +G++PPKGV+LYGPPG KT+ AKA+A +T F+ V G EL K++G+ + VR++
Sbjct: 574 FSRLGVRPPKGVLLYGPPGCSKTITAKAIATETGLNFIAVKGPELFDKFVGESERAVRQV 633
Query: 540 FRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMA 361
F+ A + +PS++F DEIDA+ R + NS R + LLN+LDG ++ +V V+ A
Sbjct: 634 FQKARQASPSVIFFDEIDALTANRGEDNSS-----DRVVAALLNELDGIEALRNVLVLAA 688
Query: 360 TNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFTIHTSRMTLADDVNLSELIMSKDDL 181
TNR + +DPAL+RPGR+DR + P+ + +++I I +M A+DV+L + +
Sbjct: 689 TNRPDMIDPALMRPGRLDRLLYVGPPNFEARKQIVKIQAEKMKFAEDVDLDLIAEKTEGC 748
Query: 180 SGADIKAICTEAGLMALRE 124
SGA++ A+C EAGL+A+ E
Sbjct: 749 SGAEVVALCQEAGLIAMHE 767
Score = 151 bits (367), Expect = 7e-38
Identities = 80/199 (40%), Positives = 118/199 (59%), Gaps = 1/199 (0%)
Frame = -2
Query: 720 YEXMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVREL 541
++ I PP+GV+LYGPPGTGKT++ +AVA + +A + G ++ KYLG+ +R++
Sbjct: 305 FKFFNIMPPRGVLLYGPPGTGKTMVMRAVAAEANAQVFTIDGPSVVGKYLGETESRLRKI 364
Query: 540 FRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMA 361
F A H PSI+FIDEIDA+ KR + S E R + LL LDG + G V VI A
Sbjct: 365 FEDARAHQPSIIFIDEIDALAPKRTEDVSEAE---SRAVATLLTLLDGMANAGKVVVIAA 421
Query: 360 TNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFTIHTSRM-TLADDVNLSELIMSKDD 184
TNR ++D AL RPGR++++IE +PD+ + I + S + +D L +L
Sbjct: 422 TNRPNSIDEALRRPGRLEKEIEIGIPDKSARLDIIKLLLSGVPNEINDAQLEDLASRTHA 481
Query: 183 LSGADIKAICTEAGLMALR 127
GAD+ A+ EA L A++
Sbjct: 482 YVGADLAAVVREAALRAIK 500
>SPCC965.04c |||mitochondrial inner membrane i-AAA protease complex
subunit Yme1 |Schizosaccharomyces pombe|chr 3|||Manual
Length = 709
Score = 173 bits (420), Expect = 3e-44
Identities = 94/222 (42%), Positives = 133/222 (59%), Gaps = 4/222 (1%)
Frame = -2
Query: 723 YYEXMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRE 544
++ +G K P+GV+L GPPGTGKT+LA+AVA + + F + GS+ + Y+G G K VRE
Sbjct: 291 HFTRLGGKLPRGVLLTGPPGTGKTMLARAVAGEANVPFFFMSGSQFDEMYVGVGAKRVRE 350
Query: 543 LFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGD----V 376
LF A + APSI+FIDE+DA+G KR N+ +++T+ +LL LDGF D V
Sbjct: 351 LFAAARKQAPSIIFIDELDAIGQKR---NARDAAHMRQTLNQLLVDLDGFSKNEDLAHPV 407
Query: 375 KVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFTIHTSRMTLADDVNLSELIM 196
I ATN E+LDPAL RPGR DR I PLPD + + I HT + L DV+LS +
Sbjct: 408 VFIGATNFPESLDPALTRPGRFDRHIHVPLPDVRGRLAILLQHTRHVPLGKDVDLSIIAR 467
Query: 195 SKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKESVL 70
+GAD+ + +A + A + V+ D + SK+ +L
Sbjct: 468 GTSGFAGADLANLINQAAVYASKNLSTAVSMRDLEWSKDRIL 509
>SPBC16E9.10c |||AAA family ATPase Rix7 |Schizosaccharomyces pombe|chr
2|||Manual
Length = 779
Score = 166 bits (404), Expect = 2e-42
Identities = 86/200 (43%), Positives = 124/200 (62%), Gaps = 2/200 (1%)
Frame = -2
Query: 720 YEXMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVREL 541
Y+ +GI P GV+L+GPPG GKTLLAKAVAN++ A F+ + G EL+ KY+G+ + VR++
Sbjct: 518 YQSVGISAPTGVLLWGPPGCGKTLLAKAVANESKANFISIRGPELLNKYVGESERAVRQV 577
Query: 540 FRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMA 361
F A +P ++F DE+DA+ +R DS S + T LL +LDG R V VI A
Sbjct: 578 FLRARASSPCVIFFDELDAMVPRRDDSLSEASSRVVNT---LLTELDGLSDRSGVYVIAA 634
Query: 360 TNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFTIHTSRMTLADDVNLSELIMSK--D 187
TNR + +DPA++RPGR+D+ + LPD + I T + L ++VNL L +
Sbjct: 635 TNRPDIIDPAMLRPGRLDKTLLVDLPDAHERVEILKTLTKQTPLHEEVNLDVLGRDERCS 694
Query: 186 DLSGADIKAICTEAGLMALR 127
+ SGAD+ A+ EA + ALR
Sbjct: 695 NFSGADLAALVREAAVTALR 714
Score = 143 bits (347), Expect = 2e-35
Identities = 76/199 (38%), Positives = 114/199 (57%), Gaps = 1/199 (0%)
Frame = -2
Query: 720 YEXMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVREL 541
Y+ GI PP+GV+L+GPPG GKT+LA A+AN+ F+ + ++ G+ K VRE+
Sbjct: 200 YQYTGIHPPRGVLLHGPPGCGKTMLANALANELGVPFISISAPSIVSGMSGESEKKVREV 259
Query: 540 FRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRG-DVKVIM 364
F A+ AP ++FIDEIDAV KR + ER I L +++L + G V VI
Sbjct: 260 FEEAKSLAPCLMFIDEIDAVTPKRESAQREMERRIVAQFLTCMDELSFEKTDGKPVLVIG 319
Query: 363 ATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFTIHTSRMTLADDVNLSELIMSKDD 184
ATNR ++LD AL R GR DR+I +P + + +I + L+ D + +L
Sbjct: 320 ATNRPDSLDSALRRAGRFDREICLTVPSQDAREKILRTMAKGLKLSGDFDFRQLAKQTPG 379
Query: 183 LSGADIKAICTEAGLMALR 127
GAD+KA+ AG++A++
Sbjct: 380 YVGADLKALTAAAGIIAIK 398
>SPBP22H7.05c |||ATPase with bromodomain protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1201
Score = 150 bits (363), Expect = 2e-37
Identities = 86/200 (43%), Positives = 118/200 (59%), Gaps = 7/200 (3%)
Frame = -2
Query: 705 IKPPKGVILYGPPGTGKTLLAKAVA------NQTSATFLRVVGSELIQKYLGDGPKLVRE 544
I PP+GV+ +GPPGTGKTL+A+ +A NQ + FLR GS+ + K++G+ + +R
Sbjct: 403 ITPPRGVLFHGPPGTGKTLMARVLAANCSTKNQKISFFLRK-GSDCLSKWVGEAERQLRL 461
Query: 543 LFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIM 364
LF A PSI+F DEID + R I T+L L+ DG D+RG V VI
Sbjct: 462 LFEEARRVQPSIIFFDEIDGLAPIRSSKQEQTHSSIVSTLLALM---DGLDTRGQVVVIG 518
Query: 363 ATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFTIHTSRMT-LADDVNLSELIMSKD 187
ATNR LDPAL RPGR DR+ FPLP+++ + +I I++ + + L L S
Sbjct: 519 ATNRPNDLDPALRRPGRFDREFYFPLPNKQARMKILEINSLHFSPKIPESYLLHLAESTS 578
Query: 186 DLSGADIKAICTEAGLMALR 127
GAD+KA+CTEA L A+R
Sbjct: 579 GYGGADLKALCTEAALNAVR 598
Score = 30.7 bits (66), Expect = 0.22
Identities = 17/61 (27%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Frame = -2
Query: 666 GTGKTLLAKAVANQTSATFLRVVG-SELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEI 490
G G T L+K + + ++ + SEL+ L+ ++F A ++APSI+FI+ +
Sbjct: 716 GYGCTYLSKVLFSMLDGIHVQSLDISELLMDTTTSPRSLLTKIFSEARKNAPSIIFINNV 775
Query: 489 D 487
+
Sbjct: 776 E 776
>SPAC31G5.19 |||ATPase with bromodomain protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1190
Score = 149 bits (362), Expect = 3e-37
Identities = 79/204 (38%), Positives = 120/204 (58%), Gaps = 6/204 (2%)
Frame = -2
Query: 720 YEXMGIKPPKGVILYGPPGTGKTLLAKAVANQTSA-----TFLRVVGSELIQKYLGDGPK 556
++ ++PP+GV+ +GPPGTGKTL+A+A+A S+ +F G++ + K++G+ +
Sbjct: 292 FQRFNMQPPRGVLFHGPPGTGKTLMARALAAACSSENKKVSFYMRKGADCLSKWVGEAER 351
Query: 555 LVRELFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDV 376
+R LF A+ PSI+F DEID + R I T+L L+ DG +SRG V
Sbjct: 352 QLRLLFEEAKSTQPSIIFFDEIDGLAPVRSSKQEQIHASIVSTLLALM---DGMESRGQV 408
Query: 375 KVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFTIHTSRMTLADDVNLSELIM 196
+I ATNR + +DPAL RPGR DR+ FPLPD +++I IHT L ++
Sbjct: 409 IIIGATNRPDAVDPALRRPGRFDREFYFPLPDRDARKKIIEIHTRNWDPPVPEWLCSMLA 468
Query: 195 SKD-DLSGADIKAICTEAGLMALR 127
K GAD++A+CTEA L +++
Sbjct: 469 EKSKGYGGADLRALCTEAALNSIK 492
Score = 33.9 bits (74), Expect = 0.024
Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 1/79 (1%)
Frame = -2
Query: 720 YEXMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVG-SELIQKYLGDGPKLVRE 544
+E + I P+ +I G G G+T L A+ Q ++ S L+Q +
Sbjct: 595 FETLRIYKPRFLIC-GRKGLGQTALGPAILQQYEGVHVQSFDMSTLLQDSTQSIETSIIH 653
Query: 543 LFRVAEEHAPSIVFIDEID 487
LF H PSI++I +ID
Sbjct: 654 LFLEVRRHTPSIIYIPDID 672
>SPAC17A5.01 |pex6||peroxin-6 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 948
Score = 146 bits (355), Expect = 2e-36
Identities = 77/204 (37%), Positives = 125/204 (61%), Gaps = 4/204 (1%)
Frame = -2
Query: 708 GIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVA 529
G+KP GV+LYGPPGTGKTLLAKAVA + S F+ + G EL+ Y+G+ VR +F A
Sbjct: 684 GLKPRSGVLLYGPPGTGKTLLAKAVATELSLEFVSIKGPELLNMYVGESEANVRNVFEKA 743
Query: 528 EEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGF--DSRGDVKVIMATN 355
+P ++F DE+D++ R +S+ G + R + +LL +LD D+ V VI ATN
Sbjct: 744 RNSSPCVIFFDELDSIAPHRGNSSDSG-NVMDRVVSQLLAELDSISKDNNKYVFVIGATN 802
Query: 354 RIETLDPALIRPGRIDRKIEFPL-PDEKTKRRIFTIHTSRMTLADDVNLSELIMS-KDDL 181
R + LDP+L+RPGR D+ + + E++K + T L + ++L+E+ + +
Sbjct: 803 RPDLLDPSLLRPGRFDKLVYLGINKSEESKASMLRALTKTFKLDETIDLNEIAKNCHPNF 862
Query: 180 SGADIKAICTEAGLMALRERRMKV 109
+GAD+ A+C++A L A++ + ++
Sbjct: 863 TGADMYALCSDAVLSAIKRKTNEI 886
Score = 33.5 bits (73), Expect = 0.031
Identities = 37/179 (20%), Positives = 81/179 (45%), Gaps = 3/179 (1%)
Frame = -2
Query: 684 ILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAP-SI 508
+L+G P TGKT + VA+ SA + E D + ++F +P +I
Sbjct: 426 LLHGNPFTGKTKAVEEVASLFSAPVFTISSYEFADA-TADHLEAKLDMFVQNVVKSPCAI 484
Query: 507 VFIDEIDAVGTKRYDSN-SGGEREIQRTMLELLNQLDGFDS-RGDVKVIMATNRIETLDP 334
+F+ ++D + + N G + IQ LL+++D S +G VI + IE +
Sbjct: 485 IFVKDLDVLSISSDEGNIVPGSKSIQ----ILLSKIDLVKSPQGRYIVIGTCHSIEKIPY 540
Query: 333 ALIRPGRIDRKIEFPLPDEKTKRRIFTIHTSRMTLADDVNLSELIMSKDDLSGADIKAI 157
++ + K DE+ + + I+ + + + ++L ++ + + +S +++ +
Sbjct: 541 EILSESFFELKFSELEMDERLE--LLKIYANNVIIDKRISLKDVALKTNSMSFGELECL 597
>SPAC1834.11c |sec18||secretory pathway protein Sec18
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 792
Score = 138 bits (334), Expect = 7e-34
Identities = 84/217 (38%), Positives = 126/217 (58%), Gaps = 14/217 (6%)
Frame = -2
Query: 717 EXMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVV-GSELIQKYLGDGPKLVREL 541
E +GI KG++LYGPPGTGKTL+A+ + +A ++V G E++ KY+G + VR+L
Sbjct: 297 EKLGINHVKGILLYGPPGTGKTLIARQIGKMLNAREPKIVNGPEILNKYVGQSEENVRKL 356
Query: 540 FRVAE--------EHAPSIVFIDEIDAVGTKRYDSNSGGEREI-QRTMLELLNQLDGFDS 388
F AE E I+ DE+DA+ KR +SGG+ + + + +LL ++DG D
Sbjct: 357 FADAEREYRDRGEESGLHIIIFDELDAICKKR--GSSGGDTGVGDQVVNQLLAKMDGVDQ 414
Query: 387 RGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFTIHTSRMT----LADD 220
++ VI TNR + +D AL+RPGR++ +E LPDE + +I IHTSRM L +D
Sbjct: 415 LNNILVIGMTNRKDMIDEALLRPGRLEVHMEISLPDEHGRLQILKIHTSRMASNGILEND 474
Query: 219 VNLSELIMSKDDLSGADIKAICTEAGLMALRERRMKV 109
V++ EL + SGA+I + A A R +KV
Sbjct: 475 VDMEELASLTKNFSGAEIAGLIKSASSFAF-YRHIKV 510
>SPAC2G11.06 |vps4||AAA family ATPase Vps4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 432
Score = 136 bits (328), Expect = 4e-33
Identities = 76/195 (38%), Positives = 116/195 (59%), Gaps = 1/195 (0%)
Frame = -2
Query: 708 GIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVA 529
G KP G++LYGPPGTGK+ LAKAVA + +TF + S+L+ K++G+ +LVR+LF +A
Sbjct: 158 GRKPWSGILLYGPPGTGKSYLAKAVATEAGSTFFSISSSDLVSKWMGESERLVRQLFEMA 217
Query: 528 EEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRI 349
E PSI+FIDEID++ R + S R I+ L +N + G D G V V+ ATN
Sbjct: 218 REQKPSIIFIDEIDSLCGSRSEGESESSRRIKTEFLVQMNGV-GKDESG-VLVLGATNIP 275
Query: 348 ETLDPALIRPGRIDRKIEFPLPDEKTKRRIFTIHTSRM-TLADDVNLSELIMSKDDLSGA 172
TLD A+ R R +++I PLP+ + R+F ++ ++ + + EL D SG+
Sbjct: 276 WTLDSAIRR--RFEKRIYIPLPNAHARARMFELNVGKIPSELTSQDFKELAKMTDGYSGS 333
Query: 171 DIKAICTEAGLMALR 127
DI + +A + +R
Sbjct: 334 DISIVVRDAIMEPVR 348
>SPCC553.03 |pex1||AAA family ATPase Pex1 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 937
Score = 129 bits (311), Expect = 5e-31
Identities = 66/205 (32%), Positives = 118/205 (57%)
Frame = -2
Query: 720 YEXMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVREL 541
Y+ ++ P G++L+G PG GKT LA A+++ F+ + G EL+ KY+G + VR+L
Sbjct: 632 YKQCRLRLPTGILLFGYPGCGKTYLASAISSTFPVQFISIKGPELLDKYIGKSEQGVRDL 691
Query: 540 FRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMA 361
F A+ P ++F DE D+V +R ++G R + ++L Q+DG +S V ++ A
Sbjct: 692 FSRAQMAKPCVLFFDEFDSVAPRRGQDSTG---VTDRVVNQILTQMDGAESLDGVYIVAA 748
Query: 360 TNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFTIHTSRMTLADDVNLSELIMSKDDL 181
T R + +DPAL+RPGR+D+ I LP+E+ + + +R + + L +L D
Sbjct: 749 TTRPDMIDPALLRPGRLDKLIFCDLPNEEERLEVLQKLANRFHIENAAMLKKLSTLTDGY 808
Query: 180 SGADIKAICTEAGLMALRERRMKVT 106
+ AD+ ++ +A L+A+ + +V+
Sbjct: 809 TYADLSSLLYDAHLIAVHKLLKRVS 833
>SPCC24B10.10c |||mitochondrial outer membrane ATPase Msp1
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 355
Score = 120 bits (288), Expect = 3e-28
Identities = 69/191 (36%), Positives = 111/191 (58%)
Frame = -2
Query: 696 PKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHA 517
PKG++LYGPPG GKT+LAKA+A Q+ ATF+ V L K+ G+ KLV LF +A +
Sbjct: 125 PKGLLLYGPPGCGKTMLAKALAKQSQATFINVSVGLLTDKWFGESNKLVDALFTLARKLE 184
Query: 516 PSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLD 337
P+I+FIDEID +R ++ +I+ + + + L SR V V+ ATNR +D
Sbjct: 185 PTIIFIDEIDTFLRQRQRTDHEAMAQIKAEFMSMWDGLLSGQSR--VLVLGATNRPADID 242
Query: 336 PALIRPGRIDRKIEFPLPDEKTKRRIFTIHTSRMTLADDVNLSELIMSKDDLSGADIKAI 157
A+ R R+ + PLP+ + +R+I ++ ++ L + + + ++ + LSG+ IK +
Sbjct: 243 EAIRR--RMPKVFSIPLPNAEQRRKILELYLKKVPLEANFDWNGVVNATAGLSGSYIKEV 300
Query: 156 CTEAGLMALRE 124
C A + RE
Sbjct: 301 CRSALSVPRRE 311
>SPBC947.01 |||AAA family ATPase, unknown biological
role|Schizosaccharomyces pombe|chr 2|||Manual
Length = 660
Score = 119 bits (286), Expect = 5e-28
Identities = 76/204 (37%), Positives = 114/204 (55%), Gaps = 12/204 (5%)
Frame = -2
Query: 702 KPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEE 523
+P +G++L+GPPGTGKT+LA+AVA + ATF + S L KYLGD KLVR LF VA+
Sbjct: 410 EPVQGMLLFGPPGTGKTMLARAVATEAKATFFSISASSLTSKYLGDSEKLVRALFEVAKR 469
Query: 522 HAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTM-LELLNQLDGFDSRGD---------VK 373
S++F+DEID++ + R D SG E E R + E L Q + V
Sbjct: 470 QTCSVIFVDEIDSILSARND--SGNEHESSRRLKTEFLIQWSSLTNAAPDKQTGHSPRVL 527
Query: 372 VIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFT--IHTSRMTLADDVNLSELI 199
V+ ATN +D A R R ++ PLP+++T+ + + +H L ++ +L EL+
Sbjct: 528 VLAATNLPWCIDEAARR--RFVKRTYIPLPEKETRYKHLSHLLHNQVHCLTEE-DLEELV 584
Query: 198 MSKDDLSGADIKAICTEAGLMALR 127
+ SG+DI A+ +A + LR
Sbjct: 585 NLTEGYSGSDITALAKDAAMGPLR 608
>SPAC328.04 |||AAA family ATPase, unknown biological
role|Schizosaccharomyces pombe|chr 1|||Manual
Length = 741
Score = 110 bits (264), Expect = 2e-25
Identities = 74/206 (35%), Positives = 115/206 (55%), Gaps = 14/206 (6%)
Frame = -2
Query: 702 KPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEE 523
+P +G++L+GPPGTGKT+LA+AVA ++ + F + S L K+LG+ KLVR LF +A++
Sbjct: 490 EPARGMLLFGPPGTGKTMLARAVATESRSVFFSISASSLTSKFLGESEKLVRALFTLAKK 549
Query: 522 HAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTM-LELLNQLDGF----DSRGD-----VK 373
+PSI+F+DEID++ + R S+ G E E R + E L Q SR V
Sbjct: 550 LSPSIIFVDEIDSLLSAR--SSDGNEHETSRRIKTEFLIQWSSLARAAASRQTADHPRVL 607
Query: 372 VIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKR----RIFTIHTSRMTLADDVNLSE 205
V+ ATN +D A R R R+ PLPDE T+R + ++L D +
Sbjct: 608 VLAATNLPWCIDDAARR--RFVRRTYIPLPDETTRRLHLNNLLKYQKHSLSLED---IEA 662
Query: 204 LIMSKDDLSGADIKAICTEAGLMALR 127
++ + + SG+D+ A+ +A + LR
Sbjct: 663 IVKATEYYSGSDLTALAKDAAMGPLR 688
>SPAC644.07 |||Rieske ISP assembly protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 449
Score = 77.0 bits (181), Expect = 3e-15
Identities = 59/180 (32%), Positives = 89/180 (49%), Gaps = 1/180 (0%)
Frame = -2
Query: 723 YYEXMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRE 544
+Y+ GI +G +LYGPPG+GKT A+A + + L +K L D +L
Sbjct: 233 WYDTRGIPYRRGYLLYGPPGSGKTSFLYALAGELDYDICVL---NLAEKGLTDD-RLNHL 288
Query: 543 LFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIM 364
L V + ++V ++++D+ R S G T LLN LDG S + + M
Sbjct: 289 LSNVPPK---AVVLLEDVDSAFQGRERSGEVGFHA-NVTFSGLLNALDGVTSSDERIIFM 344
Query: 363 ATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFT-IHTSRMTLADDVNLSELIMSKD 187
TN E LDPAL+RPGR+D K + R +FT + +ADD LS+++ K+
Sbjct: 345 TTNHPEKLDPALVRPGRVDVKAYLGNATPEQVREMFTRFYGHSPEMADD--LSDIVCPKN 402
>SPAC22F3.06c |lon1||Lon protease homolog Lon1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1067
Score = 41.5 bits (93), Expect = 1e-04
Identities = 41/141 (29%), Positives = 66/141 (46%), Gaps = 13/141 (9%)
Frame = -2
Query: 708 GIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRV-VG-----SEL---IQKYLGDGP- 559
G K + L GPPG GKT + K++A+ + F R VG +E+ + Y+G P
Sbjct: 567 GTMQGKIMCLVGPPGVGKTSVGKSIASALNREFFRFSVGGLTDVAEIKGHRRTYIGAMPG 626
Query: 558 KLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREI---QRTMLELLNQLDGFDS 388
K+V+ L +V E+ ++ IDEID VG + E+ ++ L +D
Sbjct: 627 KIVQALKKVQTEN--PLILIDEIDKVGKSHQGDPASALLELLDSEQNSAFLDYYMDIPLD 684
Query: 387 RGDVKVIMATNRIETLDPALI 325
V + N I+T+ P L+
Sbjct: 685 VSSVLFVCTANTIDTIPPPLL 705
>SPAPB8E5.09 |||AAA family ATPase Rvb1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 456
Score = 33.1 bits (72), Expect = 0.041
Identities = 18/38 (47%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Frame = -2
Query: 693 KGVILYGPPGTGKTLLAKAVANQ--TSATFLRVVGSEL 586
KGV+ G GTGKT LA A+A + F +VGSE+
Sbjct: 65 KGVLFAGGAGTGKTALALAIAQELGPKVPFCPMVGSEV 102
>SPBC16D10.08c |||heat shock protein Hsp104 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 905
Score = 31.9 bits (69), Expect = 0.095
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
Frame = -2
Query: 702 KPPKGVILYGPPGTGKTLLAKAVAN---QTSATFLRVVGSELIQKY 574
+P + GP GTGKTLL KA+A+ +R+ SE ++K+
Sbjct: 612 QPIASFLFCGPSGTGKTLLTKALASFMFDDENAMIRIDMSEYMEKH 657
Score = 31.5 bits (68), Expect = 0.13
Identities = 35/126 (27%), Positives = 59/126 (46%), Gaps = 13/126 (10%)
Frame = -2
Query: 684 ILYGPPGTGKTLLAKAV----------ANQTSATFLRV-VGSELI-QKYLGDGPKLVREL 541
+L G PG GKT +A+ + AN ++ L + VGS + K+ G+ + ++ +
Sbjct: 206 VLIGEPGVGKTSIAEGLARRIIDDDVPANLSNCKLLSLDVGSLVAGSKFRGEFEERIKSV 265
Query: 540 FR-VAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIM 364
+ V E P I+F+DE+ + + SGGE ++ N L +RG + I
Sbjct: 266 LKEVEESETPIILFVDEMHLL----MGAGSGGEGG-----MDAANLLKPMLARGKLHCIG 316
Query: 363 ATNRIE 346
AT E
Sbjct: 317 ATTLAE 322
>SPAC26H5.02c |||DNA replication ATPase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 504
Score = 31.9 bits (69), Expect = 0.095
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = -2
Query: 687 VILYGPPGTGKTLLAKAVANQTSATFLRV 601
+IL+G GTGKT LA+ +A T + F+ +
Sbjct: 123 MILWGSAGTGKTTLARLIAVTTKSRFIEI 151
>SPBC23E6.07c |rfc1||DNA replication factor C complex subunit
Rfc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 934
Score = 31.5 bits (68), Expect = 0.13
Identities = 18/43 (41%), Positives = 21/43 (48%)
Frame = -2
Query: 693 KGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGD 565
K V+L GPPG GKT A VA L + S+ K L D
Sbjct: 410 KAVLLSGPPGIGKTTAAHLVAKLEGYDVLELNASDTRSKRLLD 452
>SPAC27E2.10c |rfc3|SPAPJ698.01c|DNA replication factor C complex
subunit Rfc3 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 342
Score = 31.5 bits (68), Expect = 0.13
Identities = 39/175 (22%), Positives = 73/175 (41%), Gaps = 3/175 (1%)
Frame = -2
Query: 687 VILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGD--GPKLVRELFRVAEEHAP 514
++ YGPPGTGKT A A + R ++L++ D G VRE ++ +
Sbjct: 59 MLFYGPPGTGKTSTILACARKIYGPNYR---NQLMELNASDDRGIDAVRE--QIKNFAST 113
Query: 513 SIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDP 334
+F + D+ + + R ++E + +V+ + N I + P
Sbjct: 114 RQIFASTFKMIILDEADAMTLAAQNALRRVIEKYTK--------NVRFCIICNYINKISP 165
Query: 333 ALIRPGRIDRKIEFPLPDEKTKRRI-FTIHTSRMTLADDVNLSELIMSKDDLSGA 172
A+ R R PLP ++ ++ + I + + D ++ L +SK D+ A
Sbjct: 166 AI--QSRCTRFRFQPLPPKEIEKTVDHVIQSEHCNIDPDAKMAVLRLSKGDMRKA 218
>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 4717
Score = 31.1 bits (67), Expect = 0.17
Identities = 14/42 (33%), Positives = 26/42 (61%), Gaps = 2/42 (4%)
Frame = -2
Query: 687 VILYGPPGTGKTLLAKAVANQTSATFLRVVGSEL--IQKYLG 568
+++ GP +GKT + + VA +T F+R+ E +Q+Y+G
Sbjct: 897 ILIQGPTSSGKTSMIEYVAKKTGHKFVRINNHEHTDLQEYIG 938
Score = 30.7 bits (66), Expect = 0.22
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = -2
Query: 693 KGVILYGPPGTGKTLLAKAVANQTSATFLRV 601
K ++L G PG GKT L A+A +T +R+
Sbjct: 1560 KPILLEGSPGVGKTSLITALARETGHQLVRI 1590
>SPBC31E1.06 |bms1|SPBC800.01|GTP binding protein
Bms1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1121
Score = 31.1 bits (67), Expect = 0.17
Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = -2
Query: 699 PPKGVILYGPPGTGKTLLAKAVANQTSA-TFLRVVG 595
PP V + GPPGTGK+ L K++ + S T ++ G
Sbjct: 73 PPVIVAVMGPPGTGKSTLIKSLVRRYSKYTISQITG 108
>SPCC1442.07c |||ubiquitin/metalloprotease fusion
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 282
Score = 30.7 bits (66), Expect = 0.22
Identities = 15/60 (25%), Positives = 29/60 (48%)
Frame = -2
Query: 537 RVAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMAT 358
++ + H ++ + E+D R+DS + G Q +EL + D +D D K + +T
Sbjct: 140 KIMDSHRWTVPLLSEMDPAEHTRHDSKTLGLNHNQGAHIELRLRTDRYDGFRDYKTVKST 199
>SPCC830.11c |||adenylate kinase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 175
Score = 30.3 bits (65), Expect = 0.29
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = -2
Query: 687 VILYGPPGTGKTLLAKAVANQT 622
+I+ G PGTGKT LA+ VA T
Sbjct: 11 IIICGTPGTGKTTLAEQVAETT 32
>SPBC83.08 |||AAA family ATPase Rvb2 |Schizosaccharomyces pombe|chr
2|||Manual
Length = 465
Score = 29.1 bits (62), Expect = 0.67
Identities = 21/92 (22%), Positives = 42/92 (45%), Gaps = 2/92 (2%)
Frame = -2
Query: 693 KGVILYGPPGTGKTLLAKAVANQ--TSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEH 520
+ +++ GPP TGKT +A +A + F+ + SE+ + L++ L +
Sbjct: 66 RAILMAGPPSTGKTAIAMGMAQSLGSDTPFVTLSASEVYSLEMSKTEALLQALRKSIGVR 125
Query: 519 APSIVFIDEIDAVGTKRYDSNSGGEREIQRTM 424
I E + V + S +GG ++ + T+
Sbjct: 126 IKEETEIIEGEVVEVQIDRSITGGNKQGKLTI 157
>SPAP11E10.02c |mam3|SPAPB1A10.01c|cell agglutination protein
Mam3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1082
Score = 28.3 bits (60), Expect = 1.2
Identities = 19/78 (24%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Frame = +2
Query: 329 SAGSKVSIRFVAMITFTSPLESKPSS*FNNSNMVL*ISLSPPEFE-S*RLVPTASISSMK 505
++ S VS++ + + +SP+ S + + S L S++P + L+P++S
Sbjct: 546 TSNSSVSLQTSSSLIISSPIISSSLTATSTSTPALTHSITPSNTSYTSSLIPSSSTDYSS 605
Query: 506 TIEGACSSATRNSSRTNL 559
++ CS+ T S T+L
Sbjct: 606 SLITVCSNVTSEISSTSL 623
>SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 234
Score = 28.3 bits (60), Expect = 1.2
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = -2
Query: 687 VILYGPPGTGKT-LLAKAVANQTSATFLRVVGSELIQKYLGDG 562
++L GP GTGK+ LL + V NQ VG + + + G
Sbjct: 12 IVLAGPSGTGKSCLLQRFVKNQWDDQVSHTVGIDFASRIISVG 54
>SPBC4F6.17c |||mitochondrial matrix chaperone Hsp78
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 803
Score = 28.3 bits (60), Expect = 1.2
Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 3/46 (6%)
Frame = -2
Query: 702 KPPKGVILYGPPGTGKTLLAKAVAN---QTSATFLRVVGSELIQKY 574
+P + GP G GKT L KA+A T +R SE +K+
Sbjct: 530 RPLASFLFLGPTGVGKTALTKALAEFLFDTDKAMIRFDMSEFQEKH 575
>SPAC4G9.12 |||gluconokinase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 193
Score = 27.9 bits (59), Expect = 1.6
Identities = 10/26 (38%), Positives = 18/26 (69%)
Frame = -2
Query: 684 ILYGPPGTGKTLLAKAVANQTSATFL 607
++ GP G+GKT +AKAV+ + ++
Sbjct: 18 VVIGPAGSGKTTMAKAVSEKLGFEYI 43
>SPBC115.02c |||AFG1 family mitochondrial ATPase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 454
Score = 27.5 bits (58), Expect = 2.1
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = -2
Query: 696 PKGVILYGPPGTGKTLL 646
PKG+ LYG G GKT L
Sbjct: 118 PKGIYLYGDVGCGKTAL 134
>SPBPB10D8.02c |||arylsulfatase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 554
Score = 27.1 bits (57), Expect = 2.7
Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 6/65 (9%)
Frame = -2
Query: 591 ELIQKYLG---DGPKLVRELFRVAEEHA---PSIVFIDEIDAVGTKRYDSNSGGEREIQR 430
E I KY G +GP ++R+ A++ P V +D +GTK +D + E+E
Sbjct: 228 EYINKYRGRYSEGPDVLRKNRLQAQKDLGLIPENVIPAPVDGMGTKSWDELTTEEKEFSA 287
Query: 429 TMLEL 415
+E+
Sbjct: 288 RTMEV 292
>SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 670
Score = 26.6 bits (56), Expect = 3.6
Identities = 37/166 (22%), Positives = 70/166 (42%), Gaps = 3/166 (1%)
Frame = +2
Query: 68 YRTLSFDFLKSSFVTFIRRSLSAMRPASVHIALISAPERSSFDIISSDKFTSSANVILDV 247
Y T SF L SS ++ S S++ P S+ I S P S +SS + S N+
Sbjct: 223 YNTSSF--LPSSVISSASLSSSSVLPTSI-ITSTSTPVTVSSSSLSSFTPSYSTNLTTTG 279
Query: 248 *MVKILLLVFSSG---KGNSIFLSIRPGRISAGSKVSIRFVAMITFTSPLESKPSS*FNN 418
SS +S+ + P +S+ + S + +T ++ + + +
Sbjct: 280 STTTTGSATVSSSPFYSNSSVIPTSVPSSVSSFTSSSSSYTTTLTASNTSVTYTGTGTGS 339
Query: 419 SNMVL*ISLSPPEFES*RLVPTASISSMKTIEGACSSATRNSSRTN 556
+ + SPP + + ++PT+ SS+ + + SS T + +N
Sbjct: 340 ATF----TSSPPFYSNSSVIPTSVPSSVSSFTSSNSSYTTTLTASN 381
>SPBC216.06c |swi1||replication fork protection complex subunit
Swi1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 971
Score = 26.6 bits (56), Expect = 3.6
Identities = 20/63 (31%), Positives = 31/63 (49%)
Frame = -2
Query: 276 KTKRRIFTIHTSRMTLADDVNLSELIMSKDDLSGADIKAICTEAGLMALRERRMKVTNED 97
KT I HT+R + + ++ I+ DD S DI +EA ALRE+ + +
Sbjct: 890 KTNETIID-HTTRKKKENHLRSAKYIVDSDDDSETDIAFFQSEA---ALREKNAQKASAL 945
Query: 96 FKK 88
FK+
Sbjct: 946 FKR 948
>SPCC1919.11 |mug137||BAR adaptor protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 420
Score = 26.6 bits (56), Expect = 3.6
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = +1
Query: 619 RCLVCNSLGQECFTSARRTVQDDSFG 696
+CL C +LG+ ++ QD S+G
Sbjct: 64 KCLACENLGKVMINHSKELPQDSSYG 89
>SPBC14F5.10c |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 486
Score = 26.6 bits (56), Expect = 3.6
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = +1
Query: 88 FLEVLICYFHTALSKCHETSFSTYCLNISTRKIIF*HNKFRQV 216
FL + +H + KC ETS +C+ + R HN+ R++
Sbjct: 268 FLHIFELRYHIMIKKCLETS-KRFCIAMPLRARSDGHNEHREL 309
>SPAC1F3.09 |mug161||CwfJ family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 561
Score = 26.2 bits (55), Expect = 4.7
Identities = 10/35 (28%), Positives = 21/35 (60%)
Frame = +2
Query: 488 SISSMKTIEGACSSATRNSSRTNLGPSPKYFCISS 592
S S++ + + S + N+ R+ +GP +FC+S+
Sbjct: 319 SHSALNNLHKSESGTSLNNRRSKVGPGSCFFCLSN 353
>SPAC16C9.06c |upf1||ATP-dependent RNA helicase
Upf1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 925
Score = 26.2 bits (55), Expect = 4.7
Identities = 9/17 (52%), Positives = 14/17 (82%)
Frame = -2
Query: 684 ILYGPPGTGKTLLAKAV 634
++ GPPGTGKT+ + +V
Sbjct: 411 LIQGPPGTGKTVTSASV 427
>SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 317
Score = 26.2 bits (55), Expect = 4.7
Identities = 46/177 (25%), Positives = 71/177 (40%)
Frame = +2
Query: 38 SPSGVPSFLRYRTLSFDFLKSSFVTFIRRSLSAMRPASVHIALISAPERSSFDIISSDKF 217
S S PS + RT S F+ SS T P+S + S+P SS SS K
Sbjct: 129 STSIAPSMIGTRTSSSYFITSSSST----------PSSSSSSSSSSPSSSSSKSSSSSKS 178
Query: 218 TSSANVILDV*MVKILLLVFSSGKGNSIFLSIRPGRISAGSKVSIRFVAMITFTSPLESK 397
+SS++ SS +S S P + SK S + IT T+P S
Sbjct: 179 SSSSSSSSKSSSSSSSSSKSSSSSSSSSKSSASPSSSKSSSKFSSS--SFITSTTPASSS 236
Query: 398 PSS*FNNSNMVL*ISLSPPEFES*RLVPTASISSMKTIEGACSSATRNSSRTNLGPS 568
S +V + + S T+S+SS+ + + SA+ +S+ ++ S
Sbjct: 237 SS-----GAIVSNAKTASTDDSSSASSATSSVSSVVSSASSALSASASSASASVSSS 288
>SPAC1952.10c |||conserved fungal protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 361
Score = 25.8 bits (54), Expect = 6.3
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +3
Query: 228 LMSFLMYEW*KSFSWFSRQARG 293
L+SFL+Y+ K+F W Q G
Sbjct: 172 LLSFLVYKMNKAFGWIMYQQHG 193
>SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 4196
Score = 25.8 bits (54), Expect = 6.3
Identities = 16/56 (28%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Frame = -3
Query: 674 VLRALVKHSWPRLLQTR-HLLPSYV*LDLNLYKNIWEMVLSWFVNCFALLRNMHLQ 510
++ + +KH+ L LLPS V D YK++ +V W +L++ H Q
Sbjct: 219 LILSTIKHAEENNLDLSVRLLPSKVLSDSEFYKSLSNLVNVWLKTTRSLIKLFHDQ 274
>SPAC27F1.02c |cdc8|fus4|tropomyosin|Schizosaccharomyces pombe|chr
1|||Manual
Length = 161
Score = 25.4 bits (53), Expect = 8.3
Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 4/61 (6%)
Frame = -2
Query: 207 ELIMSKDDLSGADIKAICTEAGLMALRER----RMKVTNEDFKKSKESVLYRKKEGTPEG 40
+L + + + K+ E+ L L E R+K NED +K++ L RK E E
Sbjct: 35 QLSLKEQEYESLSRKSEAAESQLEELEEETKQLRLKADNEDIQKTEAEQLSRKVELLEEE 94
Query: 39 L 37
L
Sbjct: 95 L 95
>SPCC737.07c |||DNA polymerase alpha-associated DNA helicase A
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 660
Score = 25.4 bits (53), Expect = 8.3
Identities = 8/11 (72%), Positives = 11/11 (100%)
Frame = -2
Query: 684 ILYGPPGTGKT 652
+++GPPGTGKT
Sbjct: 229 LIHGPPGTGKT 239
>SPBPB8B6.04c |grt1|SPAPB8B6.04c, SPAPB8B6.04c|transcription factor
Grt1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 648
Score = 25.4 bits (53), Expect = 8.3
Identities = 15/45 (33%), Positives = 19/45 (42%)
Frame = -2
Query: 477 TKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIET 343
+K+Y NS + M +L FD D K TNR ET
Sbjct: 574 SKKYQDNSVNNTYFDKVMQHVLVHSPAFDDSSDPK--FETNRSET 616
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,117,294
Number of Sequences: 5004
Number of extensions: 66695
Number of successful extensions: 301
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 250
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 272
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 339215786
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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