Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_pT_L02
         (645 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    25   0.53 
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    25   0.71 
AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    22   5.0  
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    22   5.0  

>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 25.0 bits (52), Expect = 0.53
 Identities = 14/40 (35%), Positives = 18/40 (45%), Gaps = 2/40 (5%)
 Frame = -3

Query: 598 WSAREFISCSYNACYIGYRN--EQXMDAKSGLQYMDSADL 485
           WS  E  SC YN  +I   +  E+ +   SGL      DL
Sbjct: 184 WSPNEDYSCEYNLVWIKEESIYEERISVVSGLHEATLTDL 223


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 24.6 bits (51), Expect = 0.71
 Identities = 12/36 (33%), Positives = 20/36 (55%), Gaps = 5/36 (13%)
 Frame = -1

Query: 249 NVLYIFLSC-----I*MLFLCNYFLLSVEFIVEMYY 157
           NV  +FL C     + +LF C + + +V F++  YY
Sbjct: 67  NVHLLFLLCSGYFTVHLLFYCPFIIFTVHFLLCTYY 102


>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +1

Query: 139 LAYTFNIIHLYNKFN 183
           L+Y FN+ HL +K N
Sbjct: 284 LSYCFNLYHLASKSN 298


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +1

Query: 139 LAYTFNIIHLYNKFN 183
           L+Y FN+ HL +K N
Sbjct: 284 LSYCFNLYHLASKSN 298


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 139,902
Number of Sequences: 336
Number of extensions: 2840
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16552695
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)