Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_pT_L01
         (693 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000E46598 Cluster: PREDICTED: similar to enteropept...    35   1.6  
UniRef50_Q00SI1 Cluster: Serin/threonin-kinase; n=1; Ostreococcu...    33   8.8  

>UniRef50_UPI0000E46598 Cluster: PREDICTED: similar to
           enteropeptidase; n=1; Strongylocentrotus purpuratus|Rep:
           PREDICTED: similar to enteropeptidase -
           Strongylocentrotus purpuratus
          Length = 243

 Score = 35.1 bits (77), Expect = 1.6
 Identities = 20/53 (37%), Positives = 29/53 (54%), Gaps = 6/53 (11%)
 Frame = -1

Query: 642 GITMLTYILYKVFKNFPCSFVTRRRSNSGCIQI------FNNCFDNSSRRRNT 502
           G+++   ILY VF++ PC+    + +NS CI I       NNC DNS   + T
Sbjct: 122 GVSLGFGILYTVFEDAPCTAAQFQCNNSRCIDISLICDSLNNCGDNSDEAQCT 174


>UniRef50_Q00SI1 Cluster: Serin/threonin-kinase; n=1; Ostreococcus
           tauri|Rep: Serin/threonin-kinase - Ostreococcus tauri
          Length = 478

 Score = 32.7 bits (71), Expect = 8.8
 Identities = 15/35 (42%), Positives = 22/35 (62%)
 Frame = +2

Query: 545 IWIHPLFDLLRVTNEHGKFLKTLYKMYVSIVIPIE 649
           I  H L+DLLRVTN  G  +K + K+ V ++  +E
Sbjct: 153 IMSHSLYDLLRVTNLRGVSIKLVRKLSVQVLYALE 187


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 566,832,594
Number of Sequences: 1657284
Number of extensions: 9975574
Number of successful extensions: 19280
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 18768
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19279
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 54545459628
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)