Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_pT_K23
         (326 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A6DAL9 Cluster: Putative uncharacterized protein; n=1; ...    33   1.2  
UniRef50_Q23TX1 Cluster: Cyclin, N-terminal domain containing pr...    31   3.7  
UniRef50_Q8ILW3 Cluster: Putative uncharacterized protein; n=1; ...    31   6.5  
UniRef50_A5HY72 Cluster: Putative uncharacterized protein; n=4; ...    30   8.6  

>UniRef50_A6DAL9 Cluster: Putative uncharacterized protein; n=1;
           Caminibacter mediatlanticus TB-2|Rep: Putative
           uncharacterized protein - Caminibacter mediatlanticus
           TB-2
          Length = 734

 Score = 33.1 bits (72), Expect = 1.2
 Identities = 11/23 (47%), Positives = 17/23 (73%)
 Frame = +3

Query: 159 RYYFKILIQVKNSVNSEYNFNTL 227
           RYYFK ++Q+KN +  + NF T+
Sbjct: 534 RYYFKYILQIKNEIEEKDNFGTI 556


>UniRef50_Q23TX1 Cluster: Cyclin, N-terminal domain containing
           protein; n=1; Tetrahymena thermophila SB210|Rep: Cyclin,
           N-terminal domain containing protein - Tetrahymena
           thermophila SB210
          Length = 418

 Score = 31.5 bits (68), Expect = 3.7
 Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
 Frame = -1

Query: 170 KIISILGM*ISCKSEKNVLSHHV--VNVKKLHEFKHFNQIRYFCLLSSXDVYSSQI 9
           ++ +I  + IS K E N+LS+    +N  +    +HFNQI +  +L    V + QI
Sbjct: 163 QLYAITSLFISAKKELNILSYQYTYINNMQFKFMRHFNQINFPQMLGFQQVNARQI 218


>UniRef50_Q8ILW3 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium falciparum 3D7|Rep: Putative uncharacterized
           protein - Plasmodium falciparum (isolate 3D7)
          Length = 573

 Score = 30.7 bits (66), Expect = 6.5
 Identities = 12/32 (37%), Positives = 22/32 (68%)
 Frame = -1

Query: 176 YFKIISILGM*ISCKSEKNVLSHHVVNVKKLH 81
           YF+II IL + ++    K ++ H+VV++K +H
Sbjct: 524 YFQIIKILNLCLNPTRNKKIMRHYVVHMKFVH 555


>UniRef50_A5HY72 Cluster: Putative uncharacterized protein; n=4;
           Clostridium botulinum|Rep: Putative uncharacterized
           protein - Clostridium botulinum A str. ATCC 3502
          Length = 549

 Score = 30.3 bits (65), Expect = 8.6
 Identities = 16/42 (38%), Positives = 29/42 (69%), Gaps = 2/42 (4%)
 Frame = +3

Query: 165 YFKILIQVKNSVNSEYNFNTLTCRYCFI-MYLNFK-SKCNRK 284
           Y KI+  +KN++N+   FNT++  Y ++ + LNFK ++C+ K
Sbjct: 401 YDKIIGTLKNNINNFKMFNTISNEYYYLDLPLNFKENECDCK 442


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 250,578,392
Number of Sequences: 1657284
Number of extensions: 3904755
Number of successful extensions: 8191
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8013
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8191
length of database: 575,637,011
effective HSP length: 85
effective length of database: 434,767,871
effective search space used: 9999661033
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)