Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_pT_K23
         (326 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    23   0.94 
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    21   2.9  
AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly pro...    20   8.8  

>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 23.0 bits (47), Expect = 0.94
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = +3

Query: 231 CRYCFIMYLNFKSKCNRKKYST 296
           CRY       F++ CN  KYST
Sbjct: 140 CRYVTTTSGMFEALCNHIKYST 161


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 21.4 bits (43), Expect = 2.9
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -1

Query: 98  NVKKLHEFKHFNQIRYFCLL 39
           +V KLH+  H+ +  Y C L
Sbjct: 245 HVLKLHQVAHYGEKVYKCTL 264


>AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly
           protein MRJP2 protein.
          Length = 452

 Score = 19.8 bits (39), Expect = 8.8
 Identities = 7/27 (25%), Positives = 15/27 (55%)
 Frame = +3

Query: 156 DRYYFKILIQVKNSVNSEYNFNTLTCR 236
           D Y   +  +++  VN ++NF+ +  R
Sbjct: 373 DEYMLVLSNRMQKIVNDDFNFDDVNFR 399


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 74,884
Number of Sequences: 438
Number of extensions: 1280
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  7217694
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)