Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_pT_K19
         (595 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    24   1.1  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    23   2.6  
AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain tran...    23   2.6  
AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.          23   2.6  
X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.          21   5.9  
AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.           21   5.9  
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    21   7.8  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = -3

Query: 434 DRFKVKQITQIDSNFLQLFVNCLYLFVY 351
           DR  +   TQ   + + LFV C++L  Y
Sbjct: 763 DRLMIDYKTQKTGSKIHLFVKCVFLMGY 790


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = -2

Query: 150 WLKDNLLVEREELFLKDDSVR 88
           WLKD   ++  E  L+ +SVR
Sbjct: 361 WLKDGHPIDHNEAVLRIESVR 381


>AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain
           transcription factor Zen2 protein.
          Length = 243

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 8/25 (32%), Positives = 17/25 (68%)
 Frame = -2

Query: 189 SQNLNWTLKELLIWLKDNLLVEREE 115
           +QNLN T +++ IW ++  +  ++E
Sbjct: 119 AQNLNLTERQIKIWFQNRRMKFKKE 143


>AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.
          Length = 292

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 8/25 (32%), Positives = 17/25 (68%)
 Frame = -2

Query: 189 SQNLNWTLKELLIWLKDNLLVEREE 115
           +QNLN T +++ IW ++  +  ++E
Sbjct: 139 AQNLNLTERQIKIWFQNRRMKFKKE 163


>X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.
          Length = 251

 Score = 21.4 bits (43), Expect = 5.9
 Identities = 8/34 (23%), Positives = 20/34 (58%)
 Frame = -2

Query: 189 SQNLNWTLKELLIWLKDNLLVEREELFLKDDSVR 88
           ++NLN + +++ IW ++  +  ++E   K  + R
Sbjct: 122 AENLNLSERQIKIWFQNRRMKHKKEQMNKVSTPR 155


>AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.
          Length = 246

 Score = 21.4 bits (43), Expect = 5.9
 Identities = 8/34 (23%), Positives = 20/34 (58%)
 Frame = -2

Query: 189 SQNLNWTLKELLIWLKDNLLVEREELFLKDDSVR 88
           ++NLN + +++ IW ++  +  ++E   K  + R
Sbjct: 113 AENLNLSERQIKIWFQNRRMKHKKEQMNKVSTPR 146


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 21.0 bits (42), Expect = 7.8
 Identities = 9/29 (31%), Positives = 15/29 (51%)
 Frame = +3

Query: 108 RTTLLFPPAGCPLTKSTALLTSNSDFENP 194
           R + L     CP+T S +  +S+   E+P
Sbjct: 367 RYSALINSQSCPITSSGSTDSSSQSVEDP 395


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 129,064
Number of Sequences: 336
Number of extensions: 2515
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14935063
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)