Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_pT_K19
         (595 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-1297|AAS65063.1|  121|Drosophila melanogaster CG33276-P...    75   6e-14
AE014297-657|AAF54154.3| 1859|Drosophila melanogaster CG31187-PA...    29   6.3  
M63450-1|AAA29051.1| 3005|Drosophila melanogaster zinc-finger ho...    28   8.3  
AE014135-89|AAF59339.2| 3005|Drosophila melanogaster CG1449-PA p...    28   8.3  

>AE014296-1297|AAS65063.1|  121|Drosophila melanogaster CG33276-PA
           protein.
          Length = 121

 Score = 75.4 bits (177), Expect = 6e-14
 Identities = 38/85 (44%), Positives = 51/85 (60%)
 Frame = -2

Query: 291 LTVEVMFGGGAELLFNKVKRKEITLPSLKTFLPDSQNLNWTLKELLIWLKDNLLVEREEL 112
           L + + F  GAELLF  +KR+E+ L   +          WT+  LL W+  N+L ER EL
Sbjct: 26  LKIILEFSAGAELLFGNIKRRELNLDGKQ---------KWTIANLLKWMHANILTERPEL 76

Query: 111 FLKDDSVRPGXXVLINEEDWERHGQ 37
           FL+ D+VRPG  VLIN+ DWE  G+
Sbjct: 77  FLQGDTVRPGILVLINDTDWELLGE 101


>AE014297-657|AAF54154.3| 1859|Drosophila melanogaster CG31187-PA
            protein.
          Length = 1859

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 11/27 (40%), Positives = 18/27 (66%)
 Frame = -2

Query: 177  NWTLKELLIWLKDNLLVEREELFLKDD 97
            NW++ E++ WL+   L E  + FLK+D
Sbjct: 1795 NWSVNEVVTWLETMQLSEYVDSFLKND 1821


>M63450-1|AAA29051.1| 3005|Drosophila melanogaster zinc-finger
            homeodomain protein 2 protein.
          Length = 3005

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 16/60 (26%), Positives = 28/60 (46%)
 Frame = -2

Query: 216  PSLKTFLPDSQNLNWTLKELLIWLKDNLLVEREELFLKDDSVRPGXXVLINEEDWERHGQ 37
            PS ++ +  SQ  N  +K +  W ++ L  ER+       +        +N E++ER GQ
Sbjct: 1822 PSEESIMEMSQKANLPMKVVKHWFRNTLFKERQRNKDSPYNFNNPPSTTLNLEEYERTGQ 1881


>AE014135-89|AAF59339.2| 3005|Drosophila melanogaster CG1449-PA
            protein.
          Length = 3005

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 16/60 (26%), Positives = 28/60 (46%)
 Frame = -2

Query: 216  PSLKTFLPDSQNLNWTLKELLIWLKDNLLVEREELFLKDDSVRPGXXVLINEEDWERHGQ 37
            PS ++ +  SQ  N  +K +  W ++ L  ER+       +        +N E++ER GQ
Sbjct: 1822 PSEESIMEMSQKANLPMKVVKHWFRNTLFKERQRNKDSPYNFNNPPSTTLNLEEYERTGQ 1881


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,524,634
Number of Sequences: 53049
Number of extensions: 437145
Number of successful extensions: 899
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 862
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 898
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2400202284
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)