Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P28_pT_K11
(336 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62244 Cluster: 40S ribosomal protein S15a; n=205; Euka... 190 5e-48
UniRef50_UPI0000608089 Cluster: PREDICTED: similar to Rps15a pro... 176 9e-44
UniRef50_Q9LX88 Cluster: 40S ribosomal protein S15a-4; n=14; Mag... 165 1e-40
UniRef50_UPI0001552BC3 Cluster: PREDICTED: similar to Rps15a pro... 165 2e-40
UniRef50_A6NIS3 Cluster: Uncharacterized protein ENSP00000348155... 161 4e-39
UniRef50_UPI0000D9C93A Cluster: PREDICTED: similar to ribosomal ... 159 1e-38
UniRef50_Q8U014 Cluster: 30S ribosomal protein S8P; n=24; Archae... 105 3e-22
UniRef50_O05636 Cluster: 30S ribosomal protein S8P; n=12; Archae... 103 8e-22
UniRef50_Q8PV35 Cluster: 30S ribosomal protein S8P; n=14; Euryar... 98 3e-20
UniRef50_Q01GJ6 Cluster: Ribosomal protein S15; n=1; Ostreococcu... 60 9e-20
UniRef50_Q9M0E0 Cluster: 40S ribosomal protein S15a-5; n=5; Magn... 94 5e-19
UniRef50_Q8SQL9 Cluster: 40S RIBOSOMAL PROTEIN S15A; n=1; Enceph... 93 1e-18
UniRef50_O28369 Cluster: 30S ribosomal protein S8P; n=3; Euryarc... 88 4e-17
UniRef50_Q6L1B2 Cluster: 30S ribosomal protein S8P; n=4; Euryarc... 83 9e-16
UniRef50_A7D102 Cluster: Ribosomal protein S8; n=1; Halorubrum l... 79 2e-14
UniRef50_A0RVY8 Cluster: 30S ribosomal protein S8P; n=3; Thermop... 77 1e-13
UniRef50_Q74NG1 Cluster: 30S ribosomal protein S8P; n=1; Nanoarc... 62 2e-09
UniRef50_UPI0000DA3D5D Cluster: PREDICTED: similar to ribosomal ... 52 3e-06
UniRef50_Q0JQL2 Cluster: Os01g0153200 protein; n=4; Oryza sativa... 42 0.002
UniRef50_UPI0000E1E986 Cluster: PREDICTED: hypothetical protein;... 40 0.015
UniRef50_Q06SG0 Cluster: Chloroplast 30S ribosomal protein S8; n... 35 0.31
UniRef50_Q2GL45 Cluster: 30S ribosomal protein S8; n=8; Ricketts... 35 0.41
UniRef50_Q76YD0 Cluster: Putative uncharacterized protein; n=1; ... 33 1.3
UniRef50_Q81VR6 Cluster: 30S ribosomal protein S8; n=96; cellula... 32 2.9
UniRef50_A6GH34 Cluster: Rieske (2Fe-2S) region; n=1; Plesiocyst... 31 3.8
UniRef50_A4GJ62 Cluster: Putative uncharacterized protein; n=1; ... 31 5.1
UniRef50_Q0P3I4 Cluster: Mitochondrion, complete genome; n=1; Os... 31 5.1
UniRef50_A7ARE0 Cluster: GTPase activator protein, putative; n=1... 31 5.1
UniRef50_Q7M8E6 Cluster: 30S ribosomal protein S8; n=26; Epsilon... 31 5.1
UniRef50_Q6MJ26 Cluster: 30S ribosomal protein S8; n=1; Bdellovi... 31 6.7
UniRef50_Q6D8U4 Cluster: Putative uncharacterized protein; n=1; ... 30 8.9
UniRef50_Q0VQ79 Cluster: Membrane-bound lytic murein transglycos... 30 8.9
UniRef50_Q2S3Q0 Cluster: 30S ribosomal protein S8; n=2; Sphingob... 30 8.9
UniRef50_Q9HWE9 Cluster: 30S ribosomal protein S8; n=46; Bacteri... 30 8.9
UniRef50_Q92616 Cluster: GCN1-like protein 1; n=40; Deuterostomi... 30 8.9
>UniRef50_P62244 Cluster: 40S ribosomal protein S15a; n=205;
Eukaryota|Rep: 40S ribosomal protein S15a - Homo sapiens
(Human)
Length = 130
Score = 190 bits (463), Expect = 5e-48
Identities = 89/100 (89%), Positives = 96/100 (96%), Gaps = 1/100 (1%)
Frame = -3
Query: 301 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGK 122
MVRMNVL+DALKSI+NAEKRGKRQVLIRPCSKVIV+FLTVMMKHGYIGEFEI+DDHRAGK
Sbjct: 1 MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVRFLTVMMKHGYIGEFEIIDDHRAGK 60
Query: 121 IVVNLTGRLNKCGVISPRFDVPINDIERW-TNLLPSRQFG 5
IVVNLTGRLNKCGVISPRFDV + D+E+W NLLPSRQFG
Sbjct: 61 IVVNLTGRLNKCGVISPRFDVQLKDLEKWQNNLLPSRQFG 100
>UniRef50_UPI0000608089 Cluster: PREDICTED: similar to Rps15a
protein; n=5; Amniota|Rep: PREDICTED: similar to Rps15a
protein - Mus musculus
Length = 253
Score = 176 bits (428), Expect = 9e-44
Identities = 84/100 (84%), Positives = 91/100 (91%), Gaps = 1/100 (1%)
Frame = -3
Query: 301 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGK 122
MVRMNVL+DALKSI+NAEKRGKRQVLIRPCSKVIV FLTVMMKHGY GEFEI+DDHR GK
Sbjct: 124 MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVWFLTVMMKHGYTGEFEIIDDHRDGK 183
Query: 121 IVVNLTGRLNKCGVISPRFDVPINDIERW-TNLLPSRQFG 5
IVVNLTGRLNKCGVIS RFDV + D+++W NLLP RQFG
Sbjct: 184 IVVNLTGRLNKCGVISLRFDVQLKDLDKWQNNLLPLRQFG 223
>UniRef50_Q9LX88 Cluster: 40S ribosomal protein S15a-4; n=14;
Magnoliophyta|Rep: 40S ribosomal protein S15a-4 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 130
Score = 165 bits (402), Expect = 1e-40
Identities = 78/100 (78%), Positives = 88/100 (88%), Gaps = 1/100 (1%)
Frame = -3
Query: 301 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGK 122
MVR++VL+D LKS++NAEKRGKRQV+IRP SKVI+KFL VM KHGYIGEFE VDDHR+GK
Sbjct: 1 MVRISVLNDGLKSMYNAEKRGKRQVMIRPSSKVIIKFLIVMQKHGYIGEFEYVDDHRSGK 60
Query: 121 IVVNLTGRLNKCGVISPRFDVPINDIERWT-NLLPSRQFG 5
IVV L GRLNKCGVISPRFDV + +IE WT LLPSRQFG
Sbjct: 61 IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFG 100
>UniRef50_UPI0001552BC3 Cluster: PREDICTED: similar to Rps15a
protein; n=3; Mus musculus|Rep: PREDICTED: similar to
Rps15a protein - Mus musculus
Length = 239
Score = 165 bits (401), Expect = 2e-40
Identities = 78/102 (76%), Positives = 88/102 (86%), Gaps = 1/102 (0%)
Frame = -3
Query: 307 LAMVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRA 128
+ MV MNVL DALKS ++AEK GKRQ IR CSK IV+FLTVMMKHGYI EFEI+DDHRA
Sbjct: 97 VTMVEMNVLVDALKSTNSAEKGGKRQFPIRLCSKAIVRFLTVMMKHGYISEFEIIDDHRA 156
Query: 127 GKIVVNLTGRLNKCGVISPRFDVPINDIERW-TNLLPSRQFG 5
GK+VVNLTGRLNKCGVISPRFDV + D+E+W NLLP+RQFG
Sbjct: 157 GKMVVNLTGRLNKCGVISPRFDVQLKDLEKWQNNLLPARQFG 198
>UniRef50_A6NIS3 Cluster: Uncharacterized protein ENSP00000348155;
n=33; Eukaryota|Rep: Uncharacterized protein
ENSP00000348155 - Homo sapiens (Human)
Length = 129
Score = 161 bits (390), Expect = 4e-39
Identities = 77/100 (77%), Positives = 88/100 (88%), Gaps = 1/100 (1%)
Frame = -3
Query: 301 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGK 122
MVR NVL+DALK I+NA+KRGKRQVL+RPCS+VI++FLTVM KHGYIGEFEI DDHRAGK
Sbjct: 1 MVRTNVLADALKRINNAKKRGKRQVLLRPCSEVIIRFLTVM-KHGYIGEFEITDDHRAGK 59
Query: 121 IVVNLTGRLNKCGVISPRFDVPINDIERW-TNLLPSRQFG 5
+VV LT RLNKCGVISPRF V + D+E+W NLLPS QFG
Sbjct: 60 MVVYLTDRLNKCGVISPRFHVQLKDLEKWQNNLLPSYQFG 99
>UniRef50_UPI0000D9C93A Cluster: PREDICTED: similar to ribosomal
protein S15a; n=1; Macaca mulatta|Rep: PREDICTED:
similar to ribosomal protein S15a - Macaca mulatta
Length = 345
Score = 159 bits (385), Expect = 1e-38
Identities = 76/93 (81%), Positives = 83/93 (89%), Gaps = 1/93 (1%)
Frame = -3
Query: 280 SDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLTG 101
SDALKSI+NAEKRGKRQVLIR CSKVIV+FL+VMMKHGYIGEFEI+DDH AGKIVVNLTG
Sbjct: 174 SDALKSINNAEKRGKRQVLIRLCSKVIVRFLSVMMKHGYIGEFEIIDDHTAGKIVVNLTG 233
Query: 100 RLNKCGVISPRFDVPINDIERW-TNLLPSRQFG 5
RLNKCGVI+ RFDV D+E+W NL PS QFG
Sbjct: 234 RLNKCGVINTRFDVQPKDLEKWRNNLFPSCQFG 266
>UniRef50_Q8U014 Cluster: 30S ribosomal protein S8P; n=24;
Archaea|Rep: 30S ribosomal protein S8P - Pyrococcus
furiosus
Length = 130
Score = 105 bits (251), Expect = 3e-22
Identities = 50/100 (50%), Positives = 69/100 (69%), Gaps = 1/100 (1%)
Frame = -3
Query: 301 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGK 122
M ++ L++AL I N+E+ GKR+V I+P SK+I + L VM K+GYIGEFE +DD RAG
Sbjct: 1 MTLLDPLANALSHITNSERVGKREVYIKPASKLIGEVLRVMQKYGYIGEFEFIDDGRAGV 60
Query: 121 IVVNLTGRLNKCGVISPRFDVPINDIERW-TNLLPSRQFG 5
V L GR+NK G I PRF V +++ E+W LP+ +FG
Sbjct: 61 YRVQLLGRINKAGAIKPRFPVKVSEFEKWEKRFLPAFEFG 100
>UniRef50_O05636 Cluster: 30S ribosomal protein S8P; n=12;
Archaea|Rep: 30S ribosomal protein S8P - Sulfolobus
acidocaldarius
Length = 133
Score = 103 bits (247), Expect = 8e-22
Identities = 51/103 (49%), Positives = 69/103 (66%), Gaps = 4/103 (3%)
Frame = -3
Query: 301 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGK 122
M +N L++AL +++N E R +Q LI P SK+I+ L VM K GYIGEFE +DD RAGK
Sbjct: 1 MPSINPLANALATLYNNEMRRNKQALITPASKLIISVLRVMQKEGYIGEFEYIDDGRAGK 60
Query: 121 IVVNLTGRLNKCGVISPRFDVPINDIERWTN----LLPSRQFG 5
I+V L GR+NKCG ISPR+ + N + R + LPS++ G
Sbjct: 61 IIVQLLGRINKCGPISPRYPLDYNGLLRLPDYIRKYLPSKEIG 103
>UniRef50_Q8PV35 Cluster: 30S ribosomal protein S8P; n=14;
Euryarchaeota|Rep: 30S ribosomal protein S8P -
Methanosarcina mazei (Methanosarcina frisia)
Length = 130
Score = 98.3 bits (234), Expect = 3e-20
Identities = 48/100 (48%), Positives = 62/100 (62%), Gaps = 1/100 (1%)
Frame = -3
Query: 301 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGK 122
MV ++ L++AL +I NAE GK ++RP SK I L VM GYIG+FE +DD +AG
Sbjct: 1 MVLLDPLANALSTIKNAEAIGKSSCIVRPASKNIGNVLKVMQDLGYIGDFEFIDDGKAGI 60
Query: 121 IVVNLTGRLNKCGVISPRFDVPINDIERW-TNLLPSRQFG 5
V L GR+NKCG I PR+ V ERW LP++ FG
Sbjct: 61 YSVTLVGRINKCGAIKPRYSVGTGSFERWEKQFLPAKNFG 100
>UniRef50_Q01GJ6 Cluster: Ribosomal protein S15; n=1; Ostreococcus
tauri|Rep: Ribosomal protein S15 - Ostreococcus tauri
Length = 144
Score = 60.1 bits (139), Expect(2) = 9e-20
Identities = 25/31 (80%), Positives = 27/31 (87%)
Frame = -3
Query: 169 GYIGEFEIVDDHRAGKIVVNLTGRLNKCGVI 77
GYI EFE +DDHRAGKIVV L GR+NKCGVI
Sbjct: 107 GYINEFEFIDDHRAGKIVVELNGRINKCGVI 137
Score = 57.2 bits (132), Expect(2) = 9e-20
Identities = 25/46 (54%), Positives = 35/46 (76%)
Frame = -3
Query: 307 LAMVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKH 170
++ V + + +S++NAEKRGKRQVL+RP SKV++KFL VM KH
Sbjct: 31 VSSVALTSIFHRAESMYNAEKRGKRQVLVRPVSKVVIKFLQVMQKH 76
>UniRef50_Q9M0E0 Cluster: 40S ribosomal protein S15a-5; n=5;
Magnoliophyta|Rep: 40S ribosomal protein S15a-5 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 129
Score = 94.3 bits (224), Expect = 5e-19
Identities = 44/95 (46%), Positives = 66/95 (69%), Gaps = 1/95 (1%)
Frame = -3
Query: 286 VLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNL 107
+L+DAL++I NAE+RGK V ++P S V+ FL +M + GYI F++ D HR G+I V+L
Sbjct: 5 ILNDALRTIVNAERRGKASVELKPISTVMSSFLRIMKEKGYIKNFQVYDPHRVGRITVDL 64
Query: 106 TGRLNKCGVISPRFDVPINDIERWT-NLLPSRQFG 5
GR+N C ++ R DV +IE++T LP+RQ+G
Sbjct: 65 QGRVNDCKALTYRQDVRAKEIEKYTERTLPTRQWG 99
>UniRef50_Q8SQL9 Cluster: 40S RIBOSOMAL PROTEIN S15A; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S15A
- Encephalitozoon cuniculi
Length = 128
Score = 93.1 bits (221), Expect = 1e-18
Identities = 44/94 (46%), Positives = 66/94 (70%), Gaps = 1/94 (1%)
Frame = -3
Query: 283 LSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLT 104
L++ K+I+NA + GKRQ+L+R ++ + FL M++HGYI F + D R+GK +++L
Sbjct: 5 LANMCKAINNASRAGKRQLLLRFSTEEMRMFLLQMLRHGYISGFSYIHDKRSGKSIIDLN 64
Query: 103 GRLNKCGVISPRFDVPINDIERW-TNLLPSRQFG 5
GRLN+CG ISP + V + IE + T LLP+RQFG
Sbjct: 65 GRLNRCGAISPNYIVKRDGIEDFRTRLLPARQFG 98
>UniRef50_O28369 Cluster: 30S ribosomal protein S8P; n=3;
Euryarchaeota|Rep: 30S ribosomal protein S8P -
Archaeoglobus fulgidus
Length = 129
Score = 87.8 bits (208), Expect = 4e-17
Identities = 42/97 (43%), Positives = 62/97 (63%), Gaps = 1/97 (1%)
Frame = -3
Query: 292 MNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVV 113
++ LS+A+ +I NAE G+++ I+P SK+I L VM +GYI FE V++HR GK +V
Sbjct: 3 VDTLSNAMIAIKNAEMVGEKKCEIKPASKLIGNVLKVMKDYGYIKGFEYVENHRGGKFIV 62
Query: 112 NLTGRLNKCGVISPRFDVPINDIERW-TNLLPSRQFG 5
L+G +N CG I PRF + + E + LP+R FG
Sbjct: 63 ELSGNINDCGAIRPRFSSSVTEYEMYEKRYLPARDFG 99
>UniRef50_Q6L1B2 Cluster: 30S ribosomal protein S8P; n=4;
Euryarchaeota|Rep: 30S ribosomal protein S8P -
Picrophilus torridus
Length = 129
Score = 83.4 bits (197), Expect = 9e-16
Identities = 39/94 (41%), Positives = 60/94 (63%), Gaps = 1/94 (1%)
Frame = -3
Query: 283 LSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLT 104
L+D + +I NA + GK +V+I P S +I + L VM + YI FE++++ R GK V L+
Sbjct: 6 LNDVINTIKNASRIGKSEVIIGPASVMIGRILKVMQDYNYIKSFEVIEEERGGKFRVELS 65
Query: 103 GRLNKCGVISPRFDVPINDIERW-TNLLPSRQFG 5
+N CGVI PR V ++IER+ + LP++ FG
Sbjct: 66 DTINNCGVIKPRLSVKNSNIERYESRYLPAQDFG 99
>UniRef50_A7D102 Cluster: Ribosomal protein S8; n=1; Halorubrum
lacusprofundi ATCC 49239|Rep: Ribosomal protein S8 -
Halorubrum lacusprofundi ATCC 49239
Length = 147
Score = 79.0 bits (186), Expect = 2e-14
Identities = 37/102 (36%), Positives = 55/102 (53%), Gaps = 1/102 (0%)
Frame = -3
Query: 307 LAMVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRA 128
L M + ++AL + NAE G + P S +I L V+ GY+ FE VDD +A
Sbjct: 16 LIMTGNDPFTNALAGMDNAESVGHLSYTVEPASNIIGSVLEVLYDRGYVDGFEYVDDGKA 75
Query: 127 GKIVVNLTGRLNKCGVISPRFDVPINDIERW-TNLLPSRQFG 5
GK V L G +N+CG + PR+ ++ E+W LP+R +G
Sbjct: 76 GKFEVELKGAINECGAVKPRYSAGADEFEKWEKRYLPARDYG 117
>UniRef50_A0RVY8 Cluster: 30S ribosomal protein S8P; n=3;
Thermoprotei|Rep: 30S ribosomal protein S8P -
Cenarchaeum symbiosum
Length = 130
Score = 76.6 bits (180), Expect = 1e-13
Identities = 40/100 (40%), Positives = 56/100 (56%), Gaps = 1/100 (1%)
Frame = -3
Query: 301 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGK 122
M N+L++ +++N E R + + P SK+ V+ L + K GYIGEFE V+D R GK
Sbjct: 1 MPATNILANLFVTLYNTEARRRGDCQVYPTSKLGVEVLGTLKKAGYIGEFEHVEDSRGGK 60
Query: 121 IVVNLTGRLNKCGVISPRFDVPINDIERW-TNLLPSRQFG 5
V+L ++ KCG ISPRF V + W LPS G
Sbjct: 61 FSVHLLAKITKCGAISPRFKVKKGEYTFWEQQYLPSYDRG 100
>UniRef50_Q74NG1 Cluster: 30S ribosomal protein S8P; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S8P -
Nanoarchaeum equitans
Length = 129
Score = 62.5 bits (145), Expect = 2e-09
Identities = 28/96 (29%), Positives = 53/96 (55%), Gaps = 1/96 (1%)
Frame = -3
Query: 289 NVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVN 110
++++D L + N ++G+ + P S +I+K + +M + GYI + +VD R I +
Sbjct: 4 DIVADFLSHLTNVRRKGEDKTAFFPVSNLIIKLVEIMKREGYIKNYRLVDSSRGKIIEIE 63
Query: 109 LTGRLNKCGVISPRFDVPINDIERW-TNLLPSRQFG 5
L+ N+ I PRF V +++E++ LP+ FG
Sbjct: 64 LSEYFNEANAIKPRFPVEYSELEKYEKRYLPALNFG 99
>UniRef50_UPI0000DA3D5D Cluster: PREDICTED: similar to ribosomal
protein S15a; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to ribosomal protein S15a - Rattus norvegicus
Length = 60
Score = 52.0 bits (119), Expect = 3e-06
Identities = 27/52 (51%), Positives = 35/52 (67%)
Frame = -3
Query: 193 FLTVMMKHGYIGEFEIVDDHRAGKIVVNLTGRLNKCGVISPRFDVPINDIER 38
F+TV MK G+FEIVD+ G+I V+L G LNK GVI FDV + D+E+
Sbjct: 3 FVTVKMK---TGKFEIVDNEGVGRITVSLMGSLNKYGVIGLGFDVQLGDLEK 51
>UniRef50_Q0JQL2 Cluster: Os01g0153200 protein; n=4; Oryza sativa|Rep:
Os01g0153200 protein - Oryza sativa subsp. japonica
(Rice)
Length = 1139
Score = 42.3 bits (95), Expect = 0.002
Identities = 18/34 (52%), Positives = 25/34 (73%)
Frame = -3
Query: 145 VDDHRAGKIVVNLTGRLNKCGVISPRFDVPINDI 44
VDDH++G+I++ GRLNK GVIS R DV + +
Sbjct: 912 VDDHKSGEIILEFDGRLNKWGVISFRSDVKVKKL 945
>UniRef50_UPI0000E1E986 Cluster: PREDICTED: hypothetical protein;
n=1; Pan troglodytes|Rep: PREDICTED: hypothetical
protein - Pan troglodytes
Length = 116
Score = 39.5 bits (88), Expect = 0.015
Identities = 15/25 (60%), Positives = 22/25 (88%)
Frame = -3
Query: 163 IGEFEIVDDHRAGKIVVNLTGRLNK 89
IG+FE++DDHRAGKIV NL+ ++ +
Sbjct: 9 IGKFEVIDDHRAGKIVENLSDKVTQ 33
>UniRef50_Q06SG0 Cluster: Chloroplast 30S ribosomal protein S8; n=1;
Stigeoclonium helveticum|Rep: Chloroplast 30S ribosomal
protein S8 - Stigeoclonium helveticum (Green alga)
Length = 176
Score = 35.1 bits (77), Expect = 0.31
Identities = 20/48 (41%), Positives = 28/48 (58%)
Frame = -3
Query: 289 NVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEI 146
+ +SD L I NA K+ VLI P +K+ +K ++ K GYI FEI
Sbjct: 4 DTISDMLTRIRNASIVRKKSVLI-PYTKMNLKIAEILEKEGYILSFEI 50
>UniRef50_Q2GL45 Cluster: 30S ribosomal protein S8; n=8;
Rickettsiales|Rep: 30S ribosomal protein S8 - Anaplasma
phagocytophilum (strain HZ)
Length = 133
Score = 34.7 bits (76), Expect = 0.41
Identities = 15/44 (34%), Positives = 27/44 (61%)
Frame = -3
Query: 283 LSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEF 152
++D L + N + G +V+ PCSKV++ L ++++ GYI F
Sbjct: 7 IADFLTRLRNGQA-GMNKVVYVPCSKVVMAVLRILVEEGYIESF 49
>UniRef50_Q76YD0 Cluster: Putative uncharacterized protein; n=1;
Aeromonas phage Aeh1|Rep: Putative uncharacterized
protein - Aeromonas phage Aeh1
Length = 85
Score = 33.1 bits (72), Expect = 1.3
Identities = 19/59 (32%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Frame = -3
Query: 298 VRMN-VLSDALKSIHNAEKRGKRQVLIRP-CSKVIVKFLTVMMKHGYIGEFEIVDDHRA 128
+RMN ++++ K I +A +GKR + S + + + + KHGY EF + DHR+
Sbjct: 17 LRMNDLINNISKRIESASVQGKRVTYVYDVASDIRSEVINEITKHGYEVEFVVETDHRS 75
>UniRef50_Q81VR6 Cluster: 30S ribosomal protein S8; n=96; cellular
organisms|Rep: 30S ribosomal protein S8 - Bacillus
anthracis
Length = 132
Score = 31.9 bits (69), Expect = 2.9
Identities = 20/76 (26%), Positives = 39/76 (51%)
Frame = -3
Query: 301 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGK 122
MV + ++D L I NA + + L P SK+ + ++ + G+I + E ++D++ G
Sbjct: 1 MVMTDPIADMLTRIRNANMV-RHEKLEVPASKIKKEIAELLKREGFIRDVEYIEDNKQGI 59
Query: 121 IVVNLTGRLNKCGVIS 74
+ + L N VI+
Sbjct: 60 LRIFLKYGANNERVIT 75
>UniRef50_A6GH34 Cluster: Rieske (2Fe-2S) region; n=1; Plesiocystis
pacifica SIR-1|Rep: Rieske (2Fe-2S) region -
Plesiocystis pacifica SIR-1
Length = 578
Score = 31.5 bits (68), Expect = 3.8
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = -3
Query: 133 RAGKIVVNLTGRLNKCGVISPRFDVPINDIERWT 32
R G I + G+ N+ G ++P FD+P + E WT
Sbjct: 125 RNGLIYIYYAGKGNEHGEVTPAFDIPELETEGWT 158
>UniRef50_A4GJ62 Cluster: Putative uncharacterized protein; n=1;
uncultured Nitrospinaceae bacterium|Rep: Putative
uncharacterized protein - uncultured Nitrospinaceae
bacterium
Length = 284
Score = 31.1 bits (67), Expect = 5.1
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = -3
Query: 250 EKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHR 131
E+ GK ++ +K V F T KH Y EFE++D R
Sbjct: 76 EEHGKYFSVLEASTKGFVGFFTAYRKHYYKTEFEVIDKGR 115
>UniRef50_Q0P3I4 Cluster: Mitochondrion, complete genome; n=1;
Ostreococcus tauri|Rep: Mitochondrion, complete genome -
Ostreococcus tauri
Length = 124
Score = 31.1 bits (67), Expect = 5.1
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = -3
Query: 292 MNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYI 161
M +L+ S+ N + ++Q++ P SK LTV++ HGYI
Sbjct: 1 MKLLTQMFTSLRNGQM-SRKQIVHMPYSKFCWNVLTVLLFHGYI 43
>UniRef50_A7ARE0 Cluster: GTPase activator protein, putative; n=1;
Babesia bovis|Rep: GTPase activator protein, putative -
Babesia bovis
Length = 376
Score = 31.1 bits (67), Expect = 5.1
Identities = 24/75 (32%), Positives = 36/75 (48%)
Frame = -3
Query: 232 QVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLTGRLNKCGVISPRFDVPI 53
Q L+ P K + KF +M +I E + DD R G+I+VN R+ + F +
Sbjct: 262 QYLLAPQMKQL-KFEAIMTFSKHIKEADSKDDIRVGRIIVNQAYRITQSHGNIDEF-IQQ 319
Query: 52 NDIERWTNLLPSRQF 8
D ++L PS QF
Sbjct: 320 QDASFASDLEPSTQF 334
>UniRef50_Q7M8E6 Cluster: 30S ribosomal protein S8; n=26;
Epsilonproteobacteria|Rep: 30S ribosomal protein S8 -
Wolinella succinogenes
Length = 131
Score = 31.1 bits (67), Expect = 5.1
Identities = 17/69 (24%), Positives = 38/69 (55%)
Frame = -3
Query: 289 NVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVN 110
++++D+L I NA R + +K++V L V + G+I ++++D + GK +N
Sbjct: 4 DIIADSLTRIRNAAMRRLDYTTLY-YAKIVVSILEVFLAKGFIESYKVID--KDGKQSIN 60
Query: 109 LTGRLNKCG 83
+ + ++ G
Sbjct: 61 VVLKYDEKG 69
>UniRef50_Q6MJ26 Cluster: 30S ribosomal protein S8; n=1;
Bdellovibrio bacteriovorus|Rep: 30S ribosomal protein S8
- Bdellovibrio bacteriovorus
Length = 129
Score = 30.7 bits (66), Expect = 6.7
Identities = 18/62 (29%), Positives = 30/62 (48%)
Frame = -3
Query: 292 MNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVV 113
M+ +S L I NA K + + P SKV +++ G+I F++ D + G + V
Sbjct: 1 MDTISQFLTMIRNAGA-AKHEKVDMPASKVRAGIAQILVNEGFIRSFKVAKDSKQGIMRV 59
Query: 112 NL 107
L
Sbjct: 60 YL 61
>UniRef50_Q6D8U4 Cluster: Putative uncharacterized protein; n=1;
Pectobacterium atrosepticum|Rep: Putative
uncharacterized protein - Erwinia carotovora subsp.
atroseptica (Pectobacterium atrosepticum)
Length = 860
Score = 30.3 bits (65), Expect = 8.9
Identities = 16/36 (44%), Positives = 18/36 (50%)
Frame = +1
Query: 226 GLVFSLAFQHYV*ILRRHSIRSYAPWLRFSSRFVAN 333
G + SLA Y H SY W RFSS FV+N
Sbjct: 347 GKMTSLAGYQYTEDKTEHEADSYQTWRRFSSGFVSN 382
>UniRef50_Q0VQ79 Cluster: Membrane-bound lytic murein
transglycosylase D; n=1; Alcanivorax borkumensis
SK2|Rep: Membrane-bound lytic murein transglycosylase D
- Alcanivorax borkumensis (strain SK2 / ATCC 700651 /
DSM 11573)
Length = 539
Score = 30.3 bits (65), Expect = 8.9
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -3
Query: 79 ISPRFDVPINDIERWTNLLPSRQF 8
I+ RF+V +NDI+ W N + S Q+
Sbjct: 499 IADRFNVSVNDIKSWNNSVASNQY 522
>UniRef50_Q2S3Q0 Cluster: 30S ribosomal protein S8; n=2;
Sphingobacteriales|Rep: 30S ribosomal protein S8 -
Salinibacter ruber (strain DSM 13855)
Length = 133
Score = 30.3 bits (65), Expect = 8.9
Identities = 17/59 (28%), Positives = 32/59 (54%)
Frame = -3
Query: 283 LSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNL 107
+S+ + + NA++ + V I P SK+ ++++ GYI F +DD + G + V L
Sbjct: 8 VSNYMAQLRNAQEAEQTYVDI-PASKLKRAMTQILLEKGYIKNFVNIDDEKQGLLRVYL 65
>UniRef50_Q9HWE9 Cluster: 30S ribosomal protein S8; n=46;
Bacteria|Rep: 30S ribosomal protein S8 - Pseudomonas
aeruginosa
Length = 130
Score = 30.3 bits (65), Expect = 8.9
Identities = 17/52 (32%), Positives = 27/52 (51%)
Frame = -3
Query: 301 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEI 146
M + L+D L I NA+ ++ V+ P SK+ V+ GYI +F+I
Sbjct: 1 MSMQDPLADMLTRIRNAQM-AEKTVVSMPSSKLKAAVAKVLKDEGYIADFQI 51
>UniRef50_Q92616 Cluster: GCN1-like protein 1; n=40;
Deuterostomia|Rep: GCN1-like protein 1 - Homo sapiens
(Human)
Length = 2671
Score = 30.3 bits (65), Expect = 8.9
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = +3
Query: 33 VHLSISLMGTSKRGEMTPHLFSLPVR-FTTILPAL*SSTISNSP 161
+H I L+G +GE P F LP + T+ILP L ++ SP
Sbjct: 2235 LHKEIRLIGNESKGEHVPG-FCLPKKGVTSILPVLREGVLTGSP 2277
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 291,213,089
Number of Sequences: 1657284
Number of extensions: 4829314
Number of successful extensions: 10559
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 10446
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10553
length of database: 575,637,011
effective HSP length: 87
effective length of database: 431,453,303
effective search space used: 10354879272
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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