Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P28_pT_K11
(336 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein. 26 0.33
AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein. 24 1.3
AY146747-1|AAO12062.1| 288|Anopheles gambiae odorant-binding pr... 23 4.1
AJ618931-1|CAF02009.1| 288|Anopheles gambiae odorant-binding pr... 23 4.1
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein. 22 7.1
U29486-1|AAC46995.1| 695|Anopheles gambiae ATP-binding-cassette... 21 9.4
U29485-1|AAC46994.1| 695|Anopheles gambiae ATP-binding-cassette... 21 9.4
U29484-1|AAC47423.1| 673|Anopheles gambiae ATP-binding-cassette... 21 9.4
EF519526-1|ABP73589.1| 250|Anopheles gambiae APL2 protein. 21 9.4
EF519523-1|ABP73586.1| 250|Anopheles gambiae APL2 protein. 21 9.4
EF519522-1|ABP73585.1| 250|Anopheles gambiae APL2 protein. 21 9.4
EF519521-1|ABP73584.1| 250|Anopheles gambiae APL2 protein. 21 9.4
EF519519-1|ABP73582.1| 250|Anopheles gambiae APL2 protein. 21 9.4
>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
Length = 1664
Score = 26.2 bits (55), Expect = 0.33
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = +2
Query: 191 KLNDDFGTGPDEDLSFPSLFS 253
+L DDF TGPD + + P++FS
Sbjct: 609 ELRDDFPTGPDPNFN-PNIFS 628
>AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.
Length = 1036
Score = 24.2 bits (50), Expect = 1.3
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = -3
Query: 304 AMVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKV 203
A+ +N+L+ + A+KR + Q L+R C K+
Sbjct: 598 ALRTLNLLNRSTDHALLAQKRQEHQRLVRECDKI 631
>AY146747-1|AAO12062.1| 288|Anopheles gambiae odorant-binding
protein AgamOBP42 protein.
Length = 288
Score = 22.6 bits (46), Expect = 4.1
Identities = 6/12 (50%), Positives = 10/12 (83%)
Frame = -3
Query: 64 DVPINDIERWTN 29
D+P +D E+WT+
Sbjct: 165 DIPFSDFEQWTS 176
>AJ618931-1|CAF02009.1| 288|Anopheles gambiae odorant-binding
protein OBPjj83d protein.
Length = 288
Score = 22.6 bits (46), Expect = 4.1
Identities = 6/12 (50%), Positives = 10/12 (83%)
Frame = -3
Query: 64 DVPINDIERWTN 29
D+P +D E+WT+
Sbjct: 165 DIPFSDFEQWTS 176
>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
Length = 1376
Score = 21.8 bits (44), Expect = 7.1
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = -3
Query: 118 VVNLTGRLNKCGVISPRFDVPIN 50
+ + GRL G I R+DV I+
Sbjct: 600 IPGILGRLGNLGGIDARYDVAIS 622
>U29486-1|AAC46995.1| 695|Anopheles gambiae ATP-binding-cassette
protein protein.
Length = 695
Score = 21.4 bits (43), Expect = 9.4
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +3
Query: 36 HLSISLMGTSKRGEMTPHLFSLPVRFTTILPAL 134
HL ++ G +K GE+ + S TT+L AL
Sbjct: 114 HLLKNVTGVAKSGELLAVMGSSGAGKTTLLNAL 146
>U29485-1|AAC46994.1| 695|Anopheles gambiae ATP-binding-cassette
protein protein.
Length = 695
Score = 21.4 bits (43), Expect = 9.4
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +3
Query: 36 HLSISLMGTSKRGEMTPHLFSLPVRFTTILPAL 134
HL ++ G +K GE+ + S TT+L AL
Sbjct: 114 HLLKNVTGVAKSGELLAVMGSSGAGKTTLLNAL 146
>U29484-1|AAC47423.1| 673|Anopheles gambiae ATP-binding-cassette
protein protein.
Length = 673
Score = 21.4 bits (43), Expect = 9.4
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +3
Query: 36 HLSISLMGTSKRGEMTPHLFSLPVRFTTILPAL 134
HL ++ G +K GE+ + S TT+L AL
Sbjct: 92 HLLKNVTGVAKSGELLAVMGSSGAGKTTLLNAL 124
>EF519526-1|ABP73589.1| 250|Anopheles gambiae APL2 protein.
Length = 250
Score = 21.4 bits (43), Expect = 9.4
Identities = 16/52 (30%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Frame = -3
Query: 205 VIVKFLTVMMKHGYIGEFEIVDDHRAGKIV-VNLTGRLNKCGVISPRFDVPI 53
V K +T+ + I EF+ R GK+V + L G N+ +S PI
Sbjct: 199 VFXKLITLDLSFNRIREFDFRSAXRFGKLVLLKLDG--NQLESVSNSLTAPI 248
>EF519523-1|ABP73586.1| 250|Anopheles gambiae APL2 protein.
Length = 250
Score = 21.4 bits (43), Expect = 9.4
Identities = 16/52 (30%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Frame = -3
Query: 205 VIVKFLTVMMKHGYIGEFEIVDDHRAGKIV-VNLTGRLNKCGVISPRFDVPI 53
V K +T+ + I EF+ R GK+V + L G N+ +S PI
Sbjct: 199 VFXKLITLDLSFNRIREFDFRSAXRFGKLVLLKLDG--NQLESVSNSLTAPI 248
>EF519522-1|ABP73585.1| 250|Anopheles gambiae APL2 protein.
Length = 250
Score = 21.4 bits (43), Expect = 9.4
Identities = 16/52 (30%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Frame = -3
Query: 205 VIVKFLTVMMKHGYIGEFEIVDDHRAGKIV-VNLTGRLNKCGVISPRFDVPI 53
V K +T+ + I EF+ R GK+V + L G N+ +S PI
Sbjct: 199 VFXKLITLDLSFNRIREFDFRSAXRFGKLVLLKLDG--NQLESVSNSLTAPI 248
>EF519521-1|ABP73584.1| 250|Anopheles gambiae APL2 protein.
Length = 250
Score = 21.4 bits (43), Expect = 9.4
Identities = 16/52 (30%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Frame = -3
Query: 205 VIVKFLTVMMKHGYIGEFEIVDDHRAGKIV-VNLTGRLNKCGVISPRFDVPI 53
V K +T+ + I EF+ R GK+V + L G N+ +S PI
Sbjct: 199 VFXKLITLDLSFNRIREFDFRSAXRFGKLVLLKLDG--NQLESVSNSLTAPI 248
>EF519519-1|ABP73582.1| 250|Anopheles gambiae APL2 protein.
Length = 250
Score = 21.4 bits (43), Expect = 9.4
Identities = 16/52 (30%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Frame = -3
Query: 205 VIVKFLTVMMKHGYIGEFEIVDDHRAGKIV-VNLTGRLNKCGVISPRFDVPI 53
V K +T+ + I EF+ R GK+V + L G N+ +S PI
Sbjct: 199 VFXKLITLDLSFNRIREFDFRSAXRFGKLVLLKLDG--NQLESVSNSLTAPI 248
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 306,040
Number of Sequences: 2352
Number of extensions: 4601
Number of successful extensions: 22
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 56
effective length of database: 432,267
effective search space used: 23774685
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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