Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P28_pT_K11
(336 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC105292-1|AAI05293.1| 130|Homo sapiens ribosomal protein S15a ... 190 9e-49
BC105273-1|AAI05274.1| 130|Homo sapiens ribosomal protein S15a ... 190 9e-49
BC046113-1|AAH46113.1| 130|Homo sapiens ribosomal protein S15a ... 190 9e-49
BC030569-1|AAH30569.1| 130|Homo sapiens ribosomal protein S15a ... 190 9e-49
AY208299-1|AAO48936.1| 130|Homo sapiens S15a protein. 190 9e-49
AB062400-1|BAB93487.1| 130|Homo sapiens OK/SW-cl.82 protein. 190 9e-49
X84407-1|CAA59127.1| 130|Homo sapiens ribosomal protein S15a pr... 189 2e-48
BC001697-1|AAH01697.1| 130|Homo sapiens ribosomal protein S15a ... 187 9e-48
X62691-1|CAA44568.1| 129|Homo sapiens ribosomal protein homolog... 156 2e-38
BC071775-1|AAH71775.1| 37|Homo sapiens Unknown (protein for MG... 42 4e-04
U88836-1|AAD00655.1| 994|Homo sapiens translational activator G... 30 1.5
U77700-1|AAC51648.1| 1928|Homo sapiens HsGCN1 protein. 30 1.5
D86973-1|BAA13209.2| 2675|Homo sapiens KIAA0219 protein. 30 1.5
AC004812-3|AAC83183.1| 2392|Homo sapiens WUGSC:H_267D11.3 protein. 30 1.5
>BC105292-1|AAI05293.1| 130|Homo sapiens ribosomal protein S15a
protein.
Length = 130
Score = 190 bits (463), Expect = 9e-49
Identities = 89/100 (89%), Positives = 96/100 (96%), Gaps = 1/100 (1%)
Frame = -3
Query: 301 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGK 122
MVRMNVL+DALKSI+NAEKRGKRQVLIRPCSKVIV+FLTVMMKHGYIGEFEI+DDHRAGK
Sbjct: 1 MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVRFLTVMMKHGYIGEFEIIDDHRAGK 60
Query: 121 IVVNLTGRLNKCGVISPRFDVPINDIERW-TNLLPSRQFG 5
IVVNLTGRLNKCGVISPRFDV + D+E+W NLLPSRQFG
Sbjct: 61 IVVNLTGRLNKCGVISPRFDVQLKDLEKWQNNLLPSRQFG 100
>BC105273-1|AAI05274.1| 130|Homo sapiens ribosomal protein S15a
protein.
Length = 130
Score = 190 bits (463), Expect = 9e-49
Identities = 89/100 (89%), Positives = 96/100 (96%), Gaps = 1/100 (1%)
Frame = -3
Query: 301 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGK 122
MVRMNVL+DALKSI+NAEKRGKRQVLIRPCSKVIV+FLTVMMKHGYIGEFEI+DDHRAGK
Sbjct: 1 MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVRFLTVMMKHGYIGEFEIIDDHRAGK 60
Query: 121 IVVNLTGRLNKCGVISPRFDVPINDIERW-TNLLPSRQFG 5
IVVNLTGRLNKCGVISPRFDV + D+E+W NLLPSRQFG
Sbjct: 61 IVVNLTGRLNKCGVISPRFDVQLKDLEKWQNNLLPSRQFG 100
>BC046113-1|AAH46113.1| 130|Homo sapiens ribosomal protein S15a
protein.
Length = 130
Score = 190 bits (463), Expect = 9e-49
Identities = 89/100 (89%), Positives = 96/100 (96%), Gaps = 1/100 (1%)
Frame = -3
Query: 301 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGK 122
MVRMNVL+DALKSI+NAEKRGKRQVLIRPCSKVIV+FLTVMMKHGYIGEFEI+DDHRAGK
Sbjct: 1 MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVRFLTVMMKHGYIGEFEIIDDHRAGK 60
Query: 121 IVVNLTGRLNKCGVISPRFDVPINDIERW-TNLLPSRQFG 5
IVVNLTGRLNKCGVISPRFDV + D+E+W NLLPSRQFG
Sbjct: 61 IVVNLTGRLNKCGVISPRFDVQLKDLEKWQNNLLPSRQFG 100
>BC030569-1|AAH30569.1| 130|Homo sapiens ribosomal protein S15a
protein.
Length = 130
Score = 190 bits (463), Expect = 9e-49
Identities = 89/100 (89%), Positives = 96/100 (96%), Gaps = 1/100 (1%)
Frame = -3
Query: 301 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGK 122
MVRMNVL+DALKSI+NAEKRGKRQVLIRPCSKVIV+FLTVMMKHGYIGEFEI+DDHRAGK
Sbjct: 1 MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVRFLTVMMKHGYIGEFEIIDDHRAGK 60
Query: 121 IVVNLTGRLNKCGVISPRFDVPINDIERW-TNLLPSRQFG 5
IVVNLTGRLNKCGVISPRFDV + D+E+W NLLPSRQFG
Sbjct: 61 IVVNLTGRLNKCGVISPRFDVQLKDLEKWQNNLLPSRQFG 100
>AY208299-1|AAO48936.1| 130|Homo sapiens S15a protein.
Length = 130
Score = 190 bits (463), Expect = 9e-49
Identities = 89/100 (89%), Positives = 96/100 (96%), Gaps = 1/100 (1%)
Frame = -3
Query: 301 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGK 122
MVRMNVL+DALKSI+NAEKRGKRQVLIRPCSKVIV+FLTVMMKHGYIGEFEI+DDHRAGK
Sbjct: 1 MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVRFLTVMMKHGYIGEFEIIDDHRAGK 60
Query: 121 IVVNLTGRLNKCGVISPRFDVPINDIERW-TNLLPSRQFG 5
IVVNLTGRLNKCGVISPRFDV + D+E+W NLLPSRQFG
Sbjct: 61 IVVNLTGRLNKCGVISPRFDVQLKDLEKWQNNLLPSRQFG 100
>AB062400-1|BAB93487.1| 130|Homo sapiens OK/SW-cl.82 protein.
Length = 130
Score = 190 bits (463), Expect = 9e-49
Identities = 89/100 (89%), Positives = 96/100 (96%), Gaps = 1/100 (1%)
Frame = -3
Query: 301 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGK 122
MVRMNVL+DALKSI+NAEKRGKRQVLIRPCSKVIV+FLTVMMKHGYIGEFEI+DDHRAGK
Sbjct: 1 MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVRFLTVMMKHGYIGEFEIIDDHRAGK 60
Query: 121 IVVNLTGRLNKCGVISPRFDVPINDIERW-TNLLPSRQFG 5
IVVNLTGRLNKCGVISPRFDV + D+E+W NLLPSRQFG
Sbjct: 61 IVVNLTGRLNKCGVISPRFDVQLKDLEKWQNNLLPSRQFG 100
>X84407-1|CAA59127.1| 130|Homo sapiens ribosomal protein S15a
protein.
Length = 130
Score = 189 bits (460), Expect = 2e-48
Identities = 88/100 (88%), Positives = 96/100 (96%), Gaps = 1/100 (1%)
Frame = -3
Query: 301 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGK 122
MVRMNVL+DALKSI+NAEKRGKRQVLIRPCSKVIV+FLT+MMKHGYIGEFEI+DDHRAGK
Sbjct: 1 MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVRFLTLMMKHGYIGEFEIIDDHRAGK 60
Query: 121 IVVNLTGRLNKCGVISPRFDVPINDIERW-TNLLPSRQFG 5
IVVNLTGRLNKCGVISPRFDV + D+E+W NLLPSRQFG
Sbjct: 61 IVVNLTGRLNKCGVISPRFDVQLKDLEKWQNNLLPSRQFG 100
>BC001697-1|AAH01697.1| 130|Homo sapiens ribosomal protein S15a
protein.
Length = 130
Score = 187 bits (455), Expect = 9e-48
Identities = 88/100 (88%), Positives = 95/100 (95%), Gaps = 1/100 (1%)
Frame = -3
Query: 301 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGK 122
MVRMNVL+DALKSI+NAEKRGKRQVLIRPCSKVIV+FLTVMMKHGYIGEFEI+DDHRAGK
Sbjct: 1 MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVRFLTVMMKHGYIGEFEIIDDHRAGK 60
Query: 121 IVVNLTGRLNKCGVISPRFDVPINDIERW-TNLLPSRQFG 5
IVVNLTGRLNKCGVISPR DV + D+E+W NLLPSRQFG
Sbjct: 61 IVVNLTGRLNKCGVISPRSDVQLKDLEKWQNNLLPSRQFG 100
>X62691-1|CAA44568.1| 129|Homo sapiens ribosomal protein homologous
to yeast S24 protein.
Length = 129
Score = 156 bits (378), Expect = 2e-38
Identities = 77/100 (77%), Positives = 85/100 (85%), Gaps = 1/100 (1%)
Frame = -3
Query: 301 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGK 122
MVRMNVL+DALKSI+NAEKRGKR+ L+ LTVMMKHGYIGEFEI+DDHRAGK
Sbjct: 1 MVRMNVLADALKSINNAEKRGKRRCLLGRLQSHR-PVLTVMMKHGYIGEFEIIDDHRAGK 59
Query: 121 IVVNLTGRLNKCGVISPRFDVPINDIERW-TNLLPSRQFG 5
IVVNLTGRLNKCGVISPRFDV + D+E+W NLLPSRQFG
Sbjct: 60 IVVNLTGRLNKCGVISPRFDVQLKDLEKWQNNLLPSRQFG 99
>BC071775-1|AAH71775.1| 37|Homo sapiens Unknown (protein for
MGC:88417) protein.
Length = 37
Score = 42.3 bits (95), Expect = 4e-04
Identities = 21/37 (56%), Positives = 26/37 (70%)
Frame = -3
Query: 301 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKF 191
MV MNVL+ ALKSI+N + RGK QVL R C ++ F
Sbjct: 1 MVHMNVLTIALKSINNVKTRGKHQVLRRLCPVLLSSF 37
>U88836-1|AAD00655.1| 994|Homo sapiens translational activator GCN1
protein.
Length = 994
Score = 30.3 bits (65), Expect = 1.5
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = +3
Query: 33 VHLSISLMGTSKRGEMTPHLFSLPVR-FTTILPAL*SSTISNSP 161
+H I L+G +GE P F LP + T+ILP L ++ SP
Sbjct: 558 LHKEIRLIGNESKGEHVPG-FCLPKKGVTSILPVLREGVLTGSP 600
>U77700-1|AAC51648.1| 1928|Homo sapiens HsGCN1 protein.
Length = 1928
Score = 30.3 bits (65), Expect = 1.5
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = +3
Query: 33 VHLSISLMGTSKRGEMTPHLFSLPVR-FTTILPAL*SSTISNSP 161
+H I L+G +GE P F LP + T+ILP L ++ SP
Sbjct: 1394 LHKEIRLIGNESKGEHVPG-FCLPKKGVTSILPVLREGVLTGSP 1436
>D86973-1|BAA13209.2| 2675|Homo sapiens KIAA0219 protein.
Length = 2675
Score = 30.3 bits (65), Expect = 1.5
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = +3
Query: 33 VHLSISLMGTSKRGEMTPHLFSLPVR-FTTILPAL*SSTISNSP 161
+H I L+G +GE P F LP + T+ILP L ++ SP
Sbjct: 2239 LHKEIRLIGNESKGEHVPG-FCLPKKGVTSILPVLREGVLTGSP 2281
>AC004812-3|AAC83183.1| 2392|Homo sapiens WUGSC:H_267D11.3 protein.
Length = 2392
Score = 30.3 bits (65), Expect = 1.5
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = +3
Query: 33 VHLSISLMGTSKRGEMTPHLFSLPVR-FTTILPAL*SSTISNSP 161
+H I L+G +GE P F LP + T+ILP L ++ SP
Sbjct: 1956 LHKEIRLIGNESKGEHVPG-FCLPKKGVTSILPVLREGVLTGSP 1998
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 40,712,986
Number of Sequences: 237096
Number of extensions: 633807
Number of successful extensions: 1051
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1033
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1041
length of database: 76,859,062
effective HSP length: 80
effective length of database: 57,891,382
effective search space used: 1794632842
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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