Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_pT_K09
         (649 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_08_0211 + 15899017-15901392                                         30   1.8  
08_02_1608 - 28205483-28205851,28206244-28206522                       28   5.6  
03_01_0345 - 2708483-2709346                                           28   5.6  
11_01_0772 - 6455042-6458107                                           27   9.7  

>10_08_0211 + 15899017-15901392
          Length = 791

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 14/56 (25%), Positives = 25/56 (44%)
 Frame = -1

Query: 232 ESRSHRDKWRCRGYQCDSSLKKRKRGGTELPNTHIW*KFLNNFNFIHLYNYRPAMY 65
           +S  H  +W C+G+      ++ K         H W   +N + F+  +NYRP  +
Sbjct: 395 DSFKHAPRWLCKGFLWLLCTRRSKI-------VHHWHNKVNQYEFLQSFNYRPCKW 443


>08_02_1608 - 28205483-28205851,28206244-28206522
          Length = 215

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = +1

Query: 340 FFCGDQQIIHFCSVHKVF 393
           +FC +Q   HF ++HKVF
Sbjct: 27  YFCHEQGAAHFAAIHKVF 44


>03_01_0345 - 2708483-2709346
          Length = 287

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = +1

Query: 340 FFCGDQQIIHFCSVHKVF 393
           +FC +Q   HF ++HKVF
Sbjct: 27  YFCHEQGAAHFAAIHKVF 44


>11_01_0772 - 6455042-6458107
          Length = 1021

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 14/67 (20%), Positives = 32/67 (47%)
 Frame = -2

Query: 354 ISTEKVVVKGYPLIKRDKDYVYVDPKLRVIKGIIARDLSRTKAEVTVTSGGVGATNVTLH 175
           IS  +     +P + +D+D V ++   + +K + +  +S  +       GG+G T + L+
Sbjct: 150 ISEHRFPQYSFPRLMKDEDLVGMENNRQHLKQLFSHGISALRVISVWGMGGMGKTTLVLN 209

Query: 174 LKSERGE 154
           +  +  E
Sbjct: 210 VYEQHKE 216


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,935,678
Number of Sequences: 37544
Number of extensions: 254469
Number of successful extensions: 428
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 424
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 428
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1608522592
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)