Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_pT_K05
         (375 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q6D9Q6 Cluster: Putative membrane protein; n=1; Pectoba...    32   3.0  
UniRef50_Q5KBJ8 Cluster: Putative uncharacterized protein; n=2; ...    32   3.9  
UniRef50_A5E6T4 Cluster: Predicted protein; n=1; Lodderomyces el...    31   6.9  

>UniRef50_Q6D9Q6 Cluster: Putative membrane protein; n=1;
           Pectobacterium atrosepticum|Rep: Putative membrane
           protein - Erwinia carotovora subsp. atroseptica
           (Pectobacterium atrosepticum)
          Length = 160

 Score = 32.3 bits (70), Expect = 3.0
 Identities = 18/60 (30%), Positives = 29/60 (48%)
 Frame = +3

Query: 186 CVTSAYILSLVA*KRVNSVVSFMI*LLKIKFCTCGSHCFWHDVVVVEGTALIGHVGCIDS 365
           CV  +  LS +A + + +V SF   L+ I  C  G + FW    + +G    GH G + +
Sbjct: 95  CVNKSVALSEIAHRDLKNVNSFYCFLVLISMCIEGVYRFWLSHKMSKGVYGYGHGGAVSA 154


>UniRef50_Q5KBJ8 Cluster: Putative uncharacterized protein; n=2;
           Filobasidiella neoformans|Rep: Putative uncharacterized
           protein - Cryptococcus neoformans (Filobasidiella
           neoformans)
          Length = 228

 Score = 31.9 bits (69), Expect = 3.9
 Identities = 21/50 (42%), Positives = 29/50 (58%)
 Frame = -3

Query: 334 AVPSTTTTSCQKQCEPHVQNLIFKSYIMKLTTELTLFQATSDRIYALVTQ 185
           A+P +TT S   Q  P +Q+   +  I ++ TEL L Q   DRI A+VTQ
Sbjct: 69  ALPLSTTKS---QPSPPIQSYQLRQSICEVETEL-LIQTFDDRILAIVTQ 114


>UniRef50_A5E6T4 Cluster: Predicted protein; n=1; Lodderomyces
           elongisporus NRRL YB-4239|Rep: Predicted protein -
           Lodderomyces elongisporus (Yeast) (Saccharomyces
           elongisporus)
          Length = 177

 Score = 31.1 bits (67), Expect = 6.9
 Identities = 22/67 (32%), Positives = 33/67 (49%)
 Frame = +3

Query: 174 SNIYCVTSAYILSLVA*KRVNSVVSFMI*LLKIKFCTCGSHCFWHDVVVVEGTALIGHVG 353
           S +  +  +YI   VA + + S +SF+  L+KI  C  G   F   V+ + G  L  H+G
Sbjct: 40  STVVIIVGSYISYRVAKRAIRSYISFIYLLVKIT-CVVG---FVAVVMALYGNGLKSHLG 95

Query: 354 CIDSNSF 374
              S SF
Sbjct: 96  NYASQSF 102


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 280,755,177
Number of Sequences: 1657284
Number of extensions: 4103208
Number of successful extensions: 9892
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 9675
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9889
length of database: 575,637,011
effective HSP length: 91
effective length of database: 424,824,167
effective search space used: 14019197511
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)