Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_pT_K05
         (375 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            23   3.7  
AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.    22   6.5  
AF437885-1|AAL84180.1|  157|Anopheles gambiae odorant binding pr...    22   6.5  
AY578807-1|AAT07312.1|  438|Anopheles gambiae punt protein.            22   8.7  

>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 23.0 bits (47), Expect = 3.7
 Identities = 11/37 (29%), Positives = 19/37 (51%)
 Frame = +3

Query: 147  HIKALI*NVSNIYCVTSAYILSLVA*KRVNSVVSFMI 257
            H K  I   +N+  V ++  +SLV  + VN    F++
Sbjct: 1155 HTKETIQQPANVTMVRASNTISLVTVRHVNETSKFVV 1191


>AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.
          Length = 1036

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 15/40 (37%), Positives = 19/40 (47%), Gaps = 2/40 (5%)
 Frame = +2

Query: 77  FDLLLD--NSKKKALANLVELLLECTHKGTNMKCVKYLLC 190
           F LL D   S KK LAN+ + L E   K ++       LC
Sbjct: 750 FRLLEDAYQSAKKTLANVEKKLAEVKAKSSDKNSTARALC 789


>AF437885-1|AAL84180.1|  157|Anopheles gambiae odorant binding
           protein protein.
          Length = 157

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 10/19 (52%), Positives = 10/19 (52%)
 Frame = +2

Query: 290 LTLLLARCCCGGRDCSHRT 346
           L LLL   C  G DCS  T
Sbjct: 11  LVLLLVTQCLDGADCSTTT 29


>AY578807-1|AAT07312.1|  438|Anopheles gambiae punt protein.
          Length = 438

 Score = 21.8 bits (44), Expect = 8.7
 Identities = 6/15 (40%), Positives = 8/15 (53%)
 Frame = +2

Query: 311 CCCGGRDCSHRTCWM 355
           CCC G  C+    W+
Sbjct: 34  CCCRGSMCNREHKWI 48


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 313,410
Number of Sequences: 2352
Number of extensions: 4673
Number of successful extensions: 9
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 563,979
effective HSP length: 57
effective length of database: 429,915
effective search space used: 28804305
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)