Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_pT_K03
         (761 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          25   0.50 
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    25   0.87 
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    25   0.87 
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    21   8.1  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    21   8.1  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    21   8.1  

>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 25.4 bits (53), Expect = 0.50
 Identities = 13/33 (39%), Positives = 19/33 (57%)
 Frame = -2

Query: 688 DVSGFPTIFWKPKDSSKKPQRYNGGRALEDFIK 590
           ++   P   WK  DSSKK  RY   R+++D I+
Sbjct: 220 EIEDEPDHKWKKNDSSKKKTRYY-YRSVDDVIE 251



 Score = 21.8 bits (44), Expect = 6.1
 Identities = 11/37 (29%), Positives = 17/37 (45%), Gaps = 2/37 (5%)
 Frame = -2

Query: 661 WKPKDSSKKPQRYNGGRALED--FIKYVSEQATSELK 557
           W P D S KP      R L D  F+ ++ +    +L+
Sbjct: 575 WHPSDKSAKPMLKPWQRVLPDGVFVAFLLKHIVPKLQ 611


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 24.6 bits (51), Expect = 0.87
 Identities = 15/33 (45%), Positives = 17/33 (51%)
 Frame = +2

Query: 311 ECNITTARGTTMSLYPKNAFYICFPLVRYNTHK 409
           ECN TTA G T  L    +F   F LV Y+  K
Sbjct: 179 ECNNTTAEGFTYFL-GNMSFAHIFALVEYDIFK 210


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 24.6 bits (51), Expect = 0.87
 Identities = 15/33 (45%), Positives = 17/33 (51%)
 Frame = +2

Query: 311 ECNITTARGTTMSLYPKNAFYICFPLVRYNTHK 409
           ECN TTA G T  L    +F   F LV Y+  K
Sbjct: 179 ECNNTTAEGFTYFL-GNMSFAHIFALVEYDIFK 210


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +1

Query: 421 YFIVFHITFILHTNTHADL 477
           + IV  +  +L   THADL
Sbjct: 675 FHIVIGMNLVLQVGTHADL 693


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +2

Query: 338 TTMSLYPKNAFYICF 382
           T + +Y  N FY+CF
Sbjct: 312 TLVVIYTFNLFYLCF 326


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +2

Query: 338 TTMSLYPKNAFYICF 382
           T + +Y  N FY+CF
Sbjct: 268 TLVVIYTFNLFYLCF 282


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 179,928
Number of Sequences: 336
Number of extensions: 4056
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20442493
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)