Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P28_pT_K03
(761 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z92970-1|CAB07480.1| 488|Caenorhabditis elegans Hypothetical pr... 89 4e-18
AB072567-1|BAB88817.1| 488|Caenorhabditis elegans ceERp57 protein. 89 4e-18
L15188-9|AAM22024.1| 618|Caenorhabditis elegans Hypothetical pr... 56 2e-08
Z37139-1|CAA85491.1| 485|Caenorhabditis elegans Hypothetical pr... 47 2e-05
U95074-1|AAB94647.1| 485|Caenorhabditis elegans protein disulph... 47 2e-05
U41542-8|AAN39682.1| 437|Caenorhabditis elegans Protein disulfi... 41 8e-04
U41542-7|ABO16445.1| 371|Caenorhabditis elegans Protein disulfi... 41 8e-04
U41542-6|AAK39152.1| 493|Caenorhabditis elegans Protein disulfi... 41 8e-04
Z98866-5|CAB11548.1| 436|Caenorhabditis elegans Hypothetical pr... 39 0.004
U40411-4|AAC47065.1| 440|Caenorhabditis elegans Temporarily ass... 38 0.008
AF250045-1|AAG17620.1| 246|Caenorhabditis elegans thioredoxin-l... 31 0.89
AF125955-2|AAD14719.1| 246|Caenorhabditis elegans Dumpy : short... 31 0.89
AL117205-5|CAB55163.1| 456|Caenorhabditis elegans Hypothetical ... 29 4.8
U88314-9|AAF99881.1| 408|Caenorhabditis elegans Hypothetical pr... 28 8.3
AL132853-4|CAB60442.1| 1293|Caenorhabditis elegans Hypothetical ... 28 8.3
AF016420-1|AAB65307.2| 310|Caenorhabditis elegans Serpentine re... 28 8.3
>Z92970-1|CAB07480.1| 488|Caenorhabditis elegans Hypothetical
protein H06O01.1 protein.
Length = 488
Score = 88.6 bits (210), Expect = 4e-18
Identities = 40/81 (49%), Positives = 55/81 (67%)
Frame = -2
Query: 760 KLKDEEVDIIKIDATANDWPKSQFDVSGFPTIFWKPKDSSKKPQRYNGGRALEDFIKYVS 581
KL E+V I K+DATAND P F+V GFPT+FW PK++ P YNGGR ++DF+ ++S
Sbjct: 408 KLNKEDVIIAKMDATANDVPP-MFEVRGFPTLFWLPKNAKSNPIPYNGGREVKDFVSFIS 466
Query: 580 EQATSELKGWDRKGNAKQGKE 518
+ +T LKG+ R G K+ E
Sbjct: 467 KHSTDGLKGFSRDGKKKKKTE 487
Score = 33.1 bits (72), Expect = 0.22
Identities = 18/60 (30%), Positives = 30/60 (50%)
Frame = -2
Query: 751 DEEVDIIKIDATANDWPKSQFDVSGFPTIFWKPKDSSKKPQRYNGGRALEDFIKYVSEQA 572
D V ++K+D T +F V GFPT+ K + Q Y+G R + +K++ Q+
Sbjct: 70 DPPVALVKVDCTTEKTVCDKFGVKGFPTL--KIFRNGVPAQDYDGPRDADGIVKFMRGQS 127
>AB072567-1|BAB88817.1| 488|Caenorhabditis elegans ceERp57 protein.
Length = 488
Score = 88.6 bits (210), Expect = 4e-18
Identities = 40/81 (49%), Positives = 55/81 (67%)
Frame = -2
Query: 760 KLKDEEVDIIKIDATANDWPKSQFDVSGFPTIFWKPKDSSKKPQRYNGGRALEDFIKYVS 581
KL E+V I K+DATAND P F+V GFPT+FW PK++ P YNGGR ++DF+ ++S
Sbjct: 408 KLNKEDVIIAKMDATANDVPP-MFEVRGFPTLFWLPKNAKSNPIPYNGGREVKDFVSFIS 466
Query: 580 EQATSELKGWDRKGNAKQGKE 518
+ +T LKG+ R G K+ E
Sbjct: 467 KHSTDGLKGFSRDGKKKKKTE 487
Score = 33.1 bits (72), Expect = 0.22
Identities = 18/60 (30%), Positives = 30/60 (50%)
Frame = -2
Query: 751 DEEVDIIKIDATANDWPKSQFDVSGFPTIFWKPKDSSKKPQRYNGGRALEDFIKYVSEQA 572
D V ++K+D T +F V GFPT+ K + Q Y+G R + +K++ Q+
Sbjct: 70 DPPVALVKVDCTTEKTVCDKFGVKGFPTL--KIFRNGVPAQDYDGPRDADGIVKFMRGQS 127
>L15188-9|AAM22024.1| 618|Caenorhabditis elegans Hypothetical
protein C14B9.2 protein.
Length = 618
Score = 56.4 bits (130), Expect = 2e-08
Identities = 28/71 (39%), Positives = 40/71 (56%)
Frame = -2
Query: 760 KLKDEEVDIIKIDATANDWPKSQFDVSGFPTIFWKPKDSSKKPQRYNGGRALEDFIKYVS 581
K V + K+DAT ND P SQF V GFPTI++ P +P +Y+G R LED K+++
Sbjct: 547 KKTQPNVVLAKMDATINDAP-SQFAVEGFPTIYFAPAGKKSEPIKYSGNRDLEDLKKFMT 605
Query: 580 EQATSELKGWD 548
+ + D
Sbjct: 606 KHGVKSFQKKD 616
Score = 39.1 bits (87), Expect = 0.003
Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = -2
Query: 742 VDIIKIDATANDWPKSQFDVSGFPTI-FWKPKDSSKKPQRYNGGRALEDFIKYVSEQATS 566
+ + K+DAT +F++ G+PT+ FWK K P Y+GGR +++V +
Sbjct: 84 IPLAKVDATVETELGKRFEIQGYPTLKFWK---DGKGPNDYDGGRDEAGIVEWVESRVDP 140
Query: 565 ELK 557
K
Sbjct: 141 NYK 143
Score = 32.7 bits (71), Expect = 0.29
Identities = 21/68 (30%), Positives = 37/68 (54%)
Frame = -2
Query: 760 KLKDEEVDIIKIDATANDWPKSQFDVSGFPTIFWKPKDSSKKPQRYNGGRALEDFIKYVS 581
K + +V + K+DAT +++ VSG+PT+ K + ++ YNG R IKY++
Sbjct: 194 KAQGSKVKLGKVDATIEKDLGTKYGVSGYPTM--KIIRNGRRFD-YNGPREAAGIIKYMT 250
Query: 580 EQATSELK 557
+Q+ K
Sbjct: 251 DQSKPAAK 258
>Z37139-1|CAA85491.1| 485|Caenorhabditis elegans Hypothetical
protein C14B1.1 protein.
Length = 485
Score = 46.8 bits (106), Expect = 2e-05
Identities = 26/64 (40%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
Frame = -2
Query: 757 LKDEEVDI--IKIDATANDWPKSQFDVSGFPTIFWKPKDSSKKPQRYNGGRALEDFIKYV 584
LK+E DI K+DAT N S+F+V G+PTI + S KP +Y GGRA + +V
Sbjct: 69 LKEEGSDIKLAKVDATENQALASKFEVRGYPTILY---FKSGKPTKYTGGRATAQIVDWV 125
Query: 583 SEQA 572
+++
Sbjct: 126 KKKS 129
>U95074-1|AAB94647.1| 485|Caenorhabditis elegans protein disulphide
isomerase isoformI protein.
Length = 485
Score = 46.8 bits (106), Expect = 2e-05
Identities = 26/64 (40%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
Frame = -2
Query: 757 LKDEEVDI--IKIDATANDWPKSQFDVSGFPTIFWKPKDSSKKPQRYNGGRALEDFIKYV 584
LK+E DI K+DAT N S+F+V G+PTI + S KP +Y GGRA + +V
Sbjct: 69 LKEEGSDIKLAKVDATENQALASKFEVRGYPTILY---FKSGKPTKYTGGRATAQIVDWV 125
Query: 583 SEQA 572
+++
Sbjct: 126 KKKS 129
>U41542-8|AAN39682.1| 437|Caenorhabditis elegans Protein disulfide
isomerase protein2, isoform b protein.
Length = 437
Score = 41.1 bits (92), Expect = 8e-04
Identities = 24/64 (37%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
Frame = -2
Query: 760 KLKDEEVDII--KIDATANDWPKSQFDVSGFPTIFWKPKDSSKKPQRYNGGRALEDFIKY 587
+LK+E DI K+DAT + S+F+V G+PT+ + KPQ YNGGR + I +
Sbjct: 68 QLKEEGSDIKLGKLDATVHGEVSSKFEVRGYPTL---KLFRNGKPQEYNGGRDHDSIIAW 124
Query: 586 VSEQ 575
+ ++
Sbjct: 125 LKKK 128
>U41542-7|ABO16445.1| 371|Caenorhabditis elegans Protein disulfide
isomerase protein2, isoform c protein.
Length = 371
Score = 41.1 bits (92), Expect = 8e-04
Identities = 24/64 (37%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
Frame = -2
Query: 760 KLKDEEVDII--KIDATANDWPKSQFDVSGFPTIFWKPKDSSKKPQRYNGGRALEDFIKY 587
+LK+E DI K+DAT + S+F+V G+PT+ + KPQ YNGGR + I +
Sbjct: 68 QLKEEGSDIKLGKLDATVHGEVSSKFEVRGYPTL---KLFRNGKPQEYNGGRDHDSIIAW 124
Query: 586 VSEQ 575
+ ++
Sbjct: 125 LKKK 128
>U41542-6|AAK39152.1| 493|Caenorhabditis elegans Protein disulfide
isomerase protein2, isoform a protein.
Length = 493
Score = 41.1 bits (92), Expect = 8e-04
Identities = 24/64 (37%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
Frame = -2
Query: 760 KLKDEEVDII--KIDATANDWPKSQFDVSGFPTIFWKPKDSSKKPQRYNGGRALEDFIKY 587
+LK+E DI K+DAT + S+F+V G+PT+ + KPQ YNGGR + I +
Sbjct: 68 QLKEEGSDIKLGKLDATVHGEVSSKFEVRGYPTL---KLFRNGKPQEYNGGRDHDSIIAW 124
Query: 586 VSEQ 575
+ ++
Sbjct: 125 LKKK 128
>Z98866-5|CAB11548.1| 436|Caenorhabditis elegans Hypothetical
protein Y49E10.4 protein.
Length = 436
Score = 38.7 bits (86), Expect = 0.004
Identities = 21/53 (39%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Frame = -2
Query: 727 IDATANDWPKSQFDVSGFPTI-FWKPKDSS-KKPQRYNGGRALEDFIKYVSEQ 575
+DATA++ +F + GFPTI F+ P SS + Y GGR D I Y +
Sbjct: 210 LDATAHESIAQKFGIRGFPTIKFFAPGTSSASDAEDYQGGRTSTDLISYAESK 262
Score = 32.3 bits (70), Expect = 0.39
Identities = 25/85 (29%), Positives = 39/85 (45%), Gaps = 4/85 (4%)
Frame = -2
Query: 760 KLKDEEVDIIKIDATANDWPKSQFDVSGFPTIFWKPKDSSKKPQRYNGGR---ALEDFIK 590
KL +I IDAT + ++ + G+PTI KP YNG R + D +K
Sbjct: 69 KLLKGIAEIGAIDATVHQKIPLKYSIKGYPTIKIFGATEKSKPIDYNGPRTAKGIADAVK 128
Query: 589 YVSEQATSE-LKGWDRKGNAKQGKE 518
E++ + LKG + + K K+
Sbjct: 129 KSIEKSLEQRLKGKSSEKSKKSDKK 153
>U40411-4|AAC47065.1| 440|Caenorhabditis elegans Temporarily
assigned gene nameprotein 320 protein.
Length = 440
Score = 37.9 bits (84), Expect = 0.008
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = -2
Query: 727 IDATANDWPKSQFDVSGFPTI-FWKPKDSSKKPQRYNGGRALEDFIKYVSEQATSEL 560
+DAT + ++F + GFPTI ++ P Q Y+GGR D + + S +A +
Sbjct: 220 LDATVHTVVANKFAIRGFPTIKYFAPGSDVSDAQDYDGGRQSSDIVAWASARAQENM 276
>AF250045-1|AAG17620.1| 246|Caenorhabditis elegans thioredoxin-like
protein DPY-11 protein.
Length = 246
Score = 31.1 bits (67), Expect = 0.89
Identities = 18/59 (30%), Positives = 31/59 (52%)
Frame = -2
Query: 751 DEEVDIIKIDATANDWPKSQFDVSGFPTIFWKPKDSSKKPQRYNGGRALEDFIKYVSEQ 575
D + + ++D T N +F V+ PTI+ KD + +Y+G R DFI +V ++
Sbjct: 70 DLGIKVGEVDVTVNPGLSGRFLVTALPTIY-HVKDGVFR--QYSGARDKNDFISFVEDK 125
>AF125955-2|AAD14719.1| 246|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 11 protein.
Length = 246
Score = 31.1 bits (67), Expect = 0.89
Identities = 18/59 (30%), Positives = 31/59 (52%)
Frame = -2
Query: 751 DEEVDIIKIDATANDWPKSQFDVSGFPTIFWKPKDSSKKPQRYNGGRALEDFIKYVSEQ 575
D + + ++D T N +F V+ PTI+ KD + +Y+G R DFI +V ++
Sbjct: 70 DLGIKVGEVDVTVNPGLSGRFLVTALPTIY-HVKDGVFR--QYSGARDKNDFISFVEDK 125
>AL117205-5|CAB55163.1| 456|Caenorhabditis elegans Hypothetical
protein Y116A8A.6 protein.
Length = 456
Score = 28.7 bits (61), Expect = 4.8
Identities = 19/83 (22%), Positives = 39/83 (46%), Gaps = 1/83 (1%)
Frame = -3
Query: 738 TSLRSMQLQMTGPNHNSTFPASPQSSGSLRTAQRNLRD-IMEDVL*RTSSSMFLNKPQAN 562
TSL + +Q + + S+ PA+ L+ + + + +++ RT+SS +KP+
Sbjct: 309 TSLETTIMQASSASPISSKPATTTEPSPLQASSKPATEPLLQPESARTASSSASSKPEVQ 368
Query: 561 LRAGTERVTPNKERKSCRRAVVI 493
TE TP+ S + + +
Sbjct: 369 TTIPTEIQTPSLRTSSLKTSTTV 391
>U88314-9|AAF99881.1| 408|Caenorhabditis elegans Hypothetical
protein C46H11.2 protein.
Length = 408
Score = 27.9 bits (59), Expect = 8.3
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +3
Query: 414 EVIFHCFSHYIHPSHKYTRRSFMESFESQQHAYNSS 521
+++F C HY P++ Y +F SF H Y S
Sbjct: 131 DIVFVCNGHYFAPNNPYEESAFEGSF-IHSHDYRHS 165
>AL132853-4|CAB60442.1| 1293|Caenorhabditis elegans Hypothetical
protein Y80D3A.8 protein.
Length = 1293
Score = 27.9 bits (59), Expect = 8.3
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +3
Query: 663 KIVGKPETSNCDLGQSFAVASILMMSTSSSFN 758
KIVG+ + S + QSFA+ +LM +FN
Sbjct: 9 KIVGRSKRSEMNTFQSFAIVLLLMFCKLHAFN 40
>AF016420-1|AAB65307.2| 310|Caenorhabditis elegans Serpentine
receptor, class sx protein11 protein.
Length = 310
Score = 27.9 bits (59), Expect = 8.3
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = +1
Query: 412 QKSYFIVFHITFILHTNTHADLSWKVLN 495
Q S IVFH FILH ++ D S LN
Sbjct: 280 QTSSAIVFHTNFILHKSSTMDFSASRLN 307
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,084,825
Number of Sequences: 27780
Number of extensions: 359999
Number of successful extensions: 1137
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1026
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1129
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1819579054
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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