Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_pT_K02
         (777 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13 pro...    25   0.89 
AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    23   2.7  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    23   2.7  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    23   2.7  
AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    23   3.6  
AJ457831-1|CAD29886.1|  249|Tribolium castaneum helix-loop-helix...    22   4.8  
AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    22   6.3  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    21   8.3  

>DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13
           protein.
          Length = 377

 Score = 24.6 bits (51), Expect = 0.89
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = -1

Query: 597 HNYDVHDADVRGPQGRGTGARRLHGHQEA 511
           +NYD  D D   PQ + T  R L G ++A
Sbjct: 135 YNYDGLDVDWEYPQDKATFNRLLQGLKDA 163


>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = +3

Query: 717 TMDHSLLQLVQAWHHSIL 770
           +++H L Q +QAW + IL
Sbjct: 33  SLEHQLWQKIQAWTYLIL 50


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 6/14 (42%), Positives = 12/14 (85%)
 Frame = +2

Query: 476 SGSSIVCTLHQAAS 517
           +G +++CT+HQ +S
Sbjct: 268 TGKTVICTIHQPSS 281


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 6/14 (42%), Positives = 12/14 (85%)
 Frame = +2

Query: 476 SGSSIVCTLHQAAS 517
           +G +++CT+HQ +S
Sbjct: 268 TGKTVICTIHQPSS 281


>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 13/39 (33%), Positives = 17/39 (43%), Gaps = 2/39 (5%)
 Frame = +3

Query: 534 GEHQSPYPGVPGHQHHVRHSYGQLKHVV--RILDVPKID 644
           G H SP+     H +H  H      HV+   + DV K D
Sbjct: 38  GLHHSPHLNHAMHPYHANHVNPTANHVMGGAVPDVGKRD 76


>AJ457831-1|CAD29886.1|  249|Tribolium castaneum helix-loop-helix
           transcription factor protein.
          Length = 249

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 12/46 (26%), Positives = 21/46 (45%)
 Frame = +2

Query: 545 VPLPWGPRTSASCTS*LWPAQTRSTNIGCPQNRSLLICDNPMRQHP 682
           VP+P    ++AS  S   P+Q+       P +  +  C+ P  + P
Sbjct: 200 VPIPQRTASTASSASNYSPSQSPEPESVRPLSLVVRRCEEPTEEKP 245


>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = -2

Query: 260 ILVTGGAL*AFNMKPPIESIVT 195
           I + GG   A+ + PP+ES+ T
Sbjct: 79  ITLVGGPEYAYCLLPPLESLAT 100


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -3

Query: 367 SERSGKRNPQRTETPRTG 314
           +E S  + PQ T+TP +G
Sbjct: 419 TESSTTQKPQTTKTPESG 436


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 193,437
Number of Sequences: 336
Number of extensions: 4702
Number of successful extensions: 12
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20961338
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)