Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_pT_K02
         (777 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_05_0132 - 22611030-22611908,22612016-22612135,22612644-226128...    29   3.1  
03_05_0955 + 29168771-29170507                                         29   4.1  
06_03_0375 + 20052687-20053214,20053943-20054110,20054272-200543...    28   7.2  
09_02_0256 - 6350559-6350573,6351025-6351762                           28   9.5  
07_03_0493 + 18747427-18748356,18748594-18748697,18749586-187497...    28   9.5  

>05_05_0132 -
           22611030-22611908,22612016-22612135,22612644-22612856,
           22612968-22613288,22613421-22613504
          Length = 538

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = +3

Query: 507 RQPPGDRVAGEHQSPYPGVPG 569
           R P GD   G+ Q+P+PG+ G
Sbjct: 468 RSPSGDLTVGDQQAPFPGLRG 488


>03_05_0955 + 29168771-29170507
          Length = 578

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 14/47 (29%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
 Frame = +2

Query: 629 CPQNRSLL-ICDNPMRQHPSVEQARXSH*YHHGSLPSPARPSVAPQH 766
           C  + +L+ I    ++Q    +Q +  H +HH   P P   S+AP H
Sbjct: 5   CADSGNLMAIAQQVIQQQQQQQQQQQRHHHHHHLPPPPPPQSMAPHH 51


>06_03_0375 +
           20052687-20053214,20053943-20054110,20054272-20054354,
           20054541-20054610,20054973-20055077
          Length = 317

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = +2

Query: 665 PMRQHPSVEQARXSH*YHHGSLPSPARPSVA 757
           P RQ PS+ Q +     H G  PSP+ P+ A
Sbjct: 31  PTRQLPSLPQQQLQQKQHVGHDPSPSEPTTA 61


>09_02_0256 - 6350559-6350573,6351025-6351762
          Length = 250

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 10/33 (30%), Positives = 18/33 (54%)
 Frame = -2

Query: 389 KANGWELLRKIRKTKPTENGDPTDWKAIANEFL 291
           +++ W+   K++K K    G   DW+A   EF+
Sbjct: 21  ESSEWDATTKMKKKKKRGGGGDDDWEAAFREFI 53


>07_03_0493 +
           18747427-18748356,18748594-18748697,18749586-18749795,
           18749992-18750597,18750819-18751095,18751163-18751310,
           18751957-18752044,18752167-18752284
          Length = 826

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = +3

Query: 543 QSPYPGVPGHQHHVRHSY 596
           QSP P  P HQHH  H +
Sbjct: 40  QSPRPRCPDHQHHHHHHH 57


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,024,843
Number of Sequences: 37544
Number of extensions: 511327
Number of successful extensions: 1567
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1508
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1566
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2080154268
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)