Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P28_pT_K02
(777 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC036187-1|AAH36187.1| 904|Homo sapiens serine/arginine repetit... 31 3.5
AL445686-4|CAI14682.1| 904|Homo sapiens serine/arginine repetit... 31 3.5
AL445686-3|CAI14683.1| 913|Homo sapiens serine/arginine repetit... 31 3.5
AL445648-3|CAH73090.1| 904|Homo sapiens serine/arginine repetit... 31 3.5
AL445648-2|CAH73089.1| 913|Homo sapiens serine/arginine repetit... 31 3.5
AF419855-1|AAP97290.1| 820|Homo sapiens Ser/Arg-related nuclear... 31 3.5
AF048977-1|AAC09321.1| 820|Homo sapiens Ser/Arg-related nuclear... 31 3.5
BC111758-1|AAI11759.1| 867|Homo sapiens NR3C2 protein protein. 30 8.1
AJ315514-1|CAC67405.1| 706|Homo sapiens mineralocorticoid recep... 30 8.1
AB209056-1|BAD92293.1| 853|Homo sapiens nuclear receptor subfam... 30 8.1
>BC036187-1|AAH36187.1| 904|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 904
Score = 31.5 bits (68), Expect = 3.5
Identities = 19/48 (39%), Positives = 26/48 (54%)
Frame = +2
Query: 437 TRLRSNSGPDEPRSGSSIVCTLHQAASW*PCSRRAPVPLPWGPRTSAS 580
T+ RS S + R GSS + +A S P R +P P P P+TS+S
Sbjct: 649 TKRRSPSLSSKHRKGSSPSRSTREARSPQPNKRHSPSPRPRAPQTSSS 696
>AL445686-4|CAI14682.1| 904|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 904
Score = 31.5 bits (68), Expect = 3.5
Identities = 19/48 (39%), Positives = 26/48 (54%)
Frame = +2
Query: 437 TRLRSNSGPDEPRSGSSIVCTLHQAASW*PCSRRAPVPLPWGPRTSAS 580
T+ RS S + R GSS + +A S P R +P P P P+TS+S
Sbjct: 649 TKRRSPSLSSKHRKGSSPSRSTREARSPQPNKRHSPSPRPRAPQTSSS 696
>AL445686-3|CAI14683.1| 913|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 913
Score = 31.5 bits (68), Expect = 3.5
Identities = 19/48 (39%), Positives = 26/48 (54%)
Frame = +2
Query: 437 TRLRSNSGPDEPRSGSSIVCTLHQAASW*PCSRRAPVPLPWGPRTSAS 580
T+ RS S + R GSS + +A S P R +P P P P+TS+S
Sbjct: 658 TKRRSPSLSSKHRKGSSPSRSTREARSPQPNKRHSPSPRPRAPQTSSS 705
>AL445648-3|CAH73090.1| 904|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 904
Score = 31.5 bits (68), Expect = 3.5
Identities = 19/48 (39%), Positives = 26/48 (54%)
Frame = +2
Query: 437 TRLRSNSGPDEPRSGSSIVCTLHQAASW*PCSRRAPVPLPWGPRTSAS 580
T+ RS S + R GSS + +A S P R +P P P P+TS+S
Sbjct: 649 TKRRSPSLSSKHRKGSSPSRSTREARSPQPNKRHSPSPRPRAPQTSSS 696
>AL445648-2|CAH73089.1| 913|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 913
Score = 31.5 bits (68), Expect = 3.5
Identities = 19/48 (39%), Positives = 26/48 (54%)
Frame = +2
Query: 437 TRLRSNSGPDEPRSGSSIVCTLHQAASW*PCSRRAPVPLPWGPRTSAS 580
T+ RS S + R GSS + +A S P R +P P P P+TS+S
Sbjct: 658 TKRRSPSLSSKHRKGSSPSRSTREARSPQPNKRHSPSPRPRAPQTSSS 705
>AF419855-1|AAP97290.1| 820|Homo sapiens Ser/Arg-related nuclear
matrix protein protein.
Length = 820
Score = 31.5 bits (68), Expect = 3.5
Identities = 19/48 (39%), Positives = 26/48 (54%)
Frame = +2
Query: 437 TRLRSNSGPDEPRSGSSIVCTLHQAASW*PCSRRAPVPLPWGPRTSAS 580
T+ RS S + R GSS + +A S P R +P P P P+TS+S
Sbjct: 647 TKRRSPSLSSKHRKGSSPSRSTREARSPQPNKRHSPSPRPRAPQTSSS 694
>AF048977-1|AAC09321.1| 820|Homo sapiens Ser/Arg-related nuclear
matrix protein protein.
Length = 820
Score = 31.5 bits (68), Expect = 3.5
Identities = 19/48 (39%), Positives = 26/48 (54%)
Frame = +2
Query: 437 TRLRSNSGPDEPRSGSSIVCTLHQAASW*PCSRRAPVPLPWGPRTSAS 580
T+ RS S + R GSS + +A S P R +P P P P+TS+S
Sbjct: 647 TKRRSPSLSSKHRKGSSPSRSTREARSPQPNKRHSPSPRPRAPQTSSS 694
>BC111758-1|AAI11759.1| 867|Homo sapiens NR3C2 protein protein.
Length = 867
Score = 30.3 bits (65), Expect = 8.1
Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 4/84 (4%)
Frame = +2
Query: 317 SPWGLRSLWVSFS*SFGAVPIHSP-SQWT*HTCFSGLVPECTRLRSNSGPDEPRSG-SSI 490
SP G+ S+ S + SFG+ P+HSP +Q T TC + +R S + S SS
Sbjct: 206 SPAGINSV-SSTTASFGSFPVHSPITQGTPLTCSPNVENRGSRSHSPAHASNVGSPLSSP 264
Query: 491 VCTLHQAASW*P--CSRRAPVPLP 556
+ ++ + S P CS ++PV P
Sbjct: 265 LSSMKSSISSPPSHCSVKSPVSSP 288
>AJ315514-1|CAC67405.1| 706|Homo sapiens mineralocorticoid receptor
delta protein.
Length = 706
Score = 30.3 bits (65), Expect = 8.1
Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 4/84 (4%)
Frame = +2
Query: 317 SPWGLRSLWVSFS*SFGAVPIHSP-SQWT*HTCFSGLVPECTRLRSNSGPDEPRSG-SSI 490
SP G+ S+ S + SFG+ P+HSP +Q T TC + +R S + S SS
Sbjct: 206 SPAGINSV-SSTTASFGSFPVHSPITQGTPLTCSPNVENRGSRSHSPAHASNVGSPLSSP 264
Query: 491 VCTLHQAASW*P--CSRRAPVPLP 556
+ ++ + S P CS ++PV P
Sbjct: 265 LSSMKSSISSPPSHCSVKSPVSSP 288
>AB209056-1|BAD92293.1| 853|Homo sapiens nuclear receptor subfamily
3, group C, member 2 variant protein.
Length = 853
Score = 30.3 bits (65), Expect = 8.1
Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 4/84 (4%)
Frame = +2
Query: 317 SPWGLRSLWVSFS*SFGAVPIHSP-SQWT*HTCFSGLVPECTRLRSNSGPDEPRSG-SSI 490
SP G+ S+ S + SFG+ P+HSP +Q T TC + +R S + S SS
Sbjct: 75 SPAGINSV-SSTTASFGSFPVHSPITQGTPLTCSPNVENRGSRSHSPAHASNVGSPLSSP 133
Query: 491 VCTLHQAASW*P--CSRRAPVPLP 556
+ ++ + S P CS ++PV P
Sbjct: 134 LSSMKSSISSPPSHCSVKSPVSSP 157
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 120,286,227
Number of Sequences: 237096
Number of extensions: 2866457
Number of successful extensions: 10503
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10179
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10497
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9423020542
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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