Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P28_pT_J23
(695 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex det... 24 1.2
DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex det... 24 1.2
DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex det... 24 1.2
DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex det... 24 1.6
U70841-1|AAC47455.1| 377|Apis mellifera ultraviolet sensitive o... 23 2.1
AF004168-1|AAC13417.1| 377|Apis mellifera blue-sensitive opsin ... 23 2.1
AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein. 23 2.1
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 23 3.7
DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex det... 23 3.7
AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex det... 23 3.7
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 22 4.8
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 22 6.4
DQ011226-1|AAY63895.1| 471|Apis mellifera Rh-like protein protein. 22 6.4
AB208108-1|BAE72140.1| 92|Apis mellifera Broad complex zinc fi... 22 6.4
DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex det... 21 8.5
DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex det... 21 8.5
>DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 24.2 bits (50), Expect = 1.2
Identities = 9/31 (29%), Positives = 19/31 (61%)
Frame = +1
Query: 397 NNYKTKLNTYSHNDNLKMSFFFV*F*DKLRI 489
NNYK N ++N+N K ++ + + +++ I
Sbjct: 94 NNYKYNYNNNNYNNNCKKLYYNINYIEQIPI 124
>DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 24.2 bits (50), Expect = 1.2
Identities = 9/31 (29%), Positives = 19/31 (61%)
Frame = +1
Query: 397 NNYKTKLNTYSHNDNLKMSFFFV*F*DKLRI 489
NNYK N ++N+N K ++ + + +++ I
Sbjct: 94 NNYKYNYNNNNYNNNCKKLYYNINYIEQIPI 124
>DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 24.2 bits (50), Expect = 1.2
Identities = 9/31 (29%), Positives = 19/31 (61%)
Frame = +1
Query: 397 NNYKTKLNTYSHNDNLKMSFFFV*F*DKLRI 489
NNYK N ++N+N K ++ + + +++ I
Sbjct: 94 NNYKYNYNNNNYNNNCKKLYYNINYIEQIPI 124
>DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex
determiner protein.
Length = 186
Score = 23.8 bits (49), Expect = 1.6
Identities = 8/31 (25%), Positives = 19/31 (61%)
Frame = +1
Query: 397 NNYKTKLNTYSHNDNLKMSFFFV*F*DKLRI 489
NNYK N ++N+N K ++ + + +++ +
Sbjct: 94 NNYKYNYNNNNYNNNCKKLYYNINYIEQIPV 124
>U70841-1|AAC47455.1| 377|Apis mellifera ultraviolet sensitive
opsin protein.
Length = 377
Score = 23.4 bits (48), Expect = 2.1
Identities = 7/23 (30%), Positives = 16/23 (69%)
Frame = -2
Query: 613 VILLNHPRQKKNVTKFQRYMGLN 545
+ +NHPR ++ + K ++MG++
Sbjct: 335 IYAINHPRYRQELQKRCKWMGIH 357
>AF004168-1|AAC13417.1| 377|Apis mellifera blue-sensitive opsin
protein.
Length = 377
Score = 23.4 bits (48), Expect = 2.1
Identities = 7/23 (30%), Positives = 16/23 (69%)
Frame = -2
Query: 613 VILLNHPRQKKNVTKFQRYMGLN 545
+ +NHPR ++ + K ++MG++
Sbjct: 335 IYAINHPRYRQELQKRCKWMGIH 357
>AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein.
Length = 429
Score = 23.4 bits (48), Expect = 2.1
Identities = 9/25 (36%), Positives = 17/25 (68%)
Frame = -3
Query: 495 SVNT*FILKLHKKERHFKIIIVRVC 421
+++T LK HK+++HF+ + VC
Sbjct: 380 TLSTKLTLKRHKEQQHFQPLNSAVC 404
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 22.6 bits (46), Expect = 3.7
Identities = 7/12 (58%), Positives = 10/12 (83%)
Frame = +3
Query: 174 YIPTCIMLIS*W 209
YIPTC+++I W
Sbjct: 252 YIPTCLIVIMSW 263
>DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 22.6 bits (46), Expect = 3.7
Identities = 6/22 (27%), Positives = 14/22 (63%)
Frame = +1
Query: 397 NNYKTKLNTYSHNDNLKMSFFF 462
NNY + ++ Y++N+N ++
Sbjct: 87 NNYISNISNYNNNNNYNKKLYY 108
>AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex
determiner protein.
Length = 418
Score = 22.6 bits (46), Expect = 3.7
Identities = 6/22 (27%), Positives = 14/22 (63%)
Frame = +1
Query: 397 NNYKTKLNTYSHNDNLKMSFFF 462
NNY + ++ Y++N+N ++
Sbjct: 325 NNYISNISNYNNNNNYNKKLYY 346
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 22.2 bits (45), Expect = 4.8
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +1
Query: 256 NISLILFIITKVLF*DCVQCTECKFI 333
NI +LF+I VL V C CK I
Sbjct: 6 NIFPVLFVIINVLLHGQVICFVCKDI 31
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 21.8 bits (44), Expect = 6.4
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = -3
Query: 546 IKISITFILSLSCYFTVSVNT*FILKLHKKERHFKIIIVRVCI*FCLIIIKYNF 385
I I ++ ++ L + T +L L K F I+ V I +III +NF
Sbjct: 269 ISILLSLVVFLLLVSKILPPTSLVLPLIAKYLLFTFIMNTVSILVTVIIINWNF 322
>DQ011226-1|AAY63895.1| 471|Apis mellifera Rh-like protein protein.
Length = 471
Score = 21.8 bits (44), Expect = 6.4
Identities = 8/29 (27%), Positives = 17/29 (58%)
Frame = -3
Query: 528 FILSLSCYFTVSVNT*FILKLHKKERHFK 442
F+ + YF ++++ F +K +KE H +
Sbjct: 175 FVHTFGAYFGLAISFVFGMKEKRKEHHLE 203
>AB208108-1|BAE72140.1| 92|Apis mellifera Broad complex zinc
finger domain-Z3 isoform protein.
Length = 92
Score = 21.8 bits (44), Expect = 6.4
Identities = 10/27 (37%), Positives = 13/27 (48%)
Frame = +1
Query: 352 KH*MLIILYNCEIILNNYKTKLNTYSH 432
KH LY CE Y+TK + +H
Sbjct: 28 KHEQSDTLYVCEFCNRRYRTKNSLTTH 54
>DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.4 bits (43), Expect = 8.5
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +1
Query: 373 LYNCEIILNNYKTKLNTYSHNDN 441
L N I NNYK N ++N+N
Sbjct: 84 LSNNTIHNNNYKYNYNNNNYNNN 106
>DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.4 bits (43), Expect = 8.5
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +1
Query: 373 LYNCEIILNNYKTKLNTYSHNDN 441
L N I NNYK N ++N+N
Sbjct: 84 LSNNTIHNNNYKYNYNNNNYNNN 106
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 168,909
Number of Sequences: 438
Number of extensions: 3557
Number of successful extensions: 18
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21317625
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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