Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_pT_J19
         (470 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_0702 - 31027908-31027958,31028062-31029311,31029665-310298...    30   1.1  
04_04_0158 - 23187070-23187264,23187347-23187477,23187550-231877...    29   1.9  
03_05_1111 - 30479793-30479823,30479887-30479978,30480261-304804...    27   7.6  
02_05_0609 - 30335054-30335374,30335491-30335870,30336102-303364...    27   7.6  

>02_05_0702 -
           31027908-31027958,31028062-31029311,31029665-31029842,
           31029955-31030017,31031597-31031704,31031772-31031836,
           31031928-31032015,31032104-31032157,31032234-31032380,
           31033358-31033429,31034077-31034226,31034317-31034430,
           31034762-31034875,31035925-31036077,31037437-31037529,
           31038202-31038318,31038984-31039086,31039192-31039376,
           31039448-31039522,31040451-31040534,31041547-31041588,
           31041668-31041847,31042109-31042162,31042239-31042280,
           31042869-31042967,31043040-31043174,31043325-31043427,
           31045061-31045134,31045227-31045270,31045393-31045471,
           31045592-31045705,31045842-31045946,31046027-31046161,
           31046447-31046546,31046870-31046883,31046936-31047004,
           31047079-31047182,31047299-31047347,31047931-31048023,
           31048102-31048210,31048619-31048755,31048851-31048928,
           31049015-31049104,31049402-31049467,31049546-31049638,
           31049711-31049839,31050024-31050122,31051366-31051512,
           31051605-31051910
          Length = 2050

 Score = 29.9 bits (64), Expect = 1.1
 Identities = 21/72 (29%), Positives = 39/72 (54%)
 Frame = -3

Query: 315 IVIXDDGSTIVALHQDYDFPYEHSRALPEETSKDNTVLKMTDLDEVKRVFXXMKPEFARK 136
           +++  +GS  V+  + Y+   E +++L EE +K  T L     +  K V   ++ EFAR+
Sbjct: 712 LMVLFEGSQEVS-RKAYEQVSERAKSLDEELTKLRTELLSLRSERDKAV---LEAEFARE 767

Query: 135 QLSNLTLTTEHR 100
           +L+  T   EH+
Sbjct: 768 RLNGFTAELEHQ 779


>04_04_0158 -
           23187070-23187264,23187347-23187477,23187550-23187763,
           23187834-23187932,23188034-23188156,23188247-23188366,
           23188447-23188506,23188592-23188884,23189554-23189707,
           23189813-23190130,23190668-23190798,23191001-23191586,
           23192125-23192739
          Length = 1012

 Score = 29.1 bits (62), Expect = 1.9
 Identities = 16/52 (30%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
 Frame = -3

Query: 336 LSRFYNXIVIXDDGSTIVALH-QDYDFPYEHSRALPEETSKDNTVLKMTDLD 184
           L R    +VI   GSTI+     DY +PY H R +  +  + +      D D
Sbjct: 204 LERKTGGLVIWRSGSTIILYRGTDYKYPYFHDREMKNDMDESSEHTSSDDED 255


>03_05_1111 -
           30479793-30479823,30479887-30479978,30480261-30480410,
           30482229-30482354,30482563-30482628,30483134-30483214,
           30483310-30483422,30483553-30483721,30484253-30484330,
           30485489-30485752,30486239-30486379,30486548-30486759,
           30486819-30486940,30487281-30487398,30487925-30487997
          Length = 611

 Score = 27.1 bits (57), Expect = 7.6
 Identities = 10/15 (66%), Positives = 11/15 (73%)
 Frame = -3

Query: 117 LTTEHRWYPRARDKK 73
           LT  H WYP AR+KK
Sbjct: 63  LTHPHIWYPNAREKK 77


>02_05_0609 -
           30335054-30335374,30335491-30335870,30336102-30336443,
           30336551-30336700,30336781-30336878,30336986-30337045,
           30337140-30337211,30337337-30337480,30337584-30337655,
           30337767-30337899,30338076-30338181
          Length = 625

 Score = 27.1 bits (57), Expect = 7.6
 Identities = 10/39 (25%), Positives = 22/39 (56%)
 Frame = +3

Query: 309 SLFXCRIYLMPLLGLMLFCELNRTXYLYFKVNQVHSNSL 425
           S   C  +L+P++GL+ +    R   + F V++ H+ ++
Sbjct: 247 STIGCISFLIPVMGLLFWWRHRRNHQILFDVDEQHTENV 285


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,703,534
Number of Sequences: 37544
Number of extensions: 123452
Number of successful extensions: 267
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 265
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 267
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 955200320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)