Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_pT_J10
         (643 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK025336-1|BAB15114.1|  963|Homo sapiens protein ( Homo sapiens ...    31   3.5  
AB032945-1|BAA86433.2| 1854|Homo sapiens KIAA1119 protein protein.     31   3.5  

>AK025336-1|BAB15114.1|  963|Homo sapiens protein ( Homo sapiens
           cDNA: FLJ21683 fis, clone COL09335. ).
          Length = 963

 Score = 31.1 bits (67), Expect = 3.5
 Identities = 20/78 (25%), Positives = 37/78 (47%), Gaps = 2/78 (2%)
 Frame = -1

Query: 430 KNSNVTSSLSKDPNLPSIGEYSIAYLEARMKRMEDILLNKIDQNSQRIVELKNTV--VRS 257
           +N +  SSL  D N PSI    I   E  ++++E+I L K   +    ++L+  V  +  
Sbjct: 240 RNPSNQSSLESDSNYPSISTSEIGDTEDALQQVEEIGLEKAAMDMTVFLKLQKRVRELEQ 299

Query: 256 KKKSVHTQTAHTDETYKK 203
           ++K +  Q    ++   K
Sbjct: 300 ERKKLQVQLEKREQQDSK 317


>AB032945-1|BAA86433.2| 1854|Homo sapiens KIAA1119 protein protein.
          Length = 1854

 Score = 31.1 bits (67), Expect = 3.5
 Identities = 20/78 (25%), Positives = 37/78 (47%), Gaps = 2/78 (2%)
 Frame = -1

Query: 430  KNSNVTSSLSKDPNLPSIGEYSIAYLEARMKRMEDILLNKIDQNSQRIVELKNTV--VRS 257
            +N +  SSL  D N PSI    I   E  ++++E+I L K   +    ++L+  V  +  
Sbjct: 1105 RNPSNQSSLESDSNYPSISTSEIGDTEDALQQVEEIGLEKAAMDMTVFLKLQKRVRELEQ 1164

Query: 256  KKKSVHTQTAHTDETYKK 203
            ++K +  Q    ++   K
Sbjct: 1165 ERKKLQVQLEKREQQDSK 1182


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 68,564,834
Number of Sequences: 237096
Number of extensions: 1273476
Number of successful extensions: 2573
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2501
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2573
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7085195460
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)