Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_pT_J10
         (643 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    24   1.4  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    24   1.4  
AB194707-1|BAD69622.1|  247|Apis mellifera heme oxygenase protein.     23   1.9  
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    22   4.4  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    22   4.4  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    22   4.4  
AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex det...    22   5.8  
AF514804-1|AAM51823.1|  537|Apis mellifera neuronal nicotinic ac...    21   7.7  

>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 10/31 (32%), Positives = 18/31 (58%)
 Frame = -2

Query: 105 KFLHRLKNVAKGNDSHKCYERFMKINVNSTS 13
           K+L  ++NV   N+   C +RF+  + N+ S
Sbjct: 323 KYLQLIENVIPSNEELICDKRFVDESANNLS 353


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 10/31 (32%), Positives = 18/31 (58%)
 Frame = -2

Query: 105 KFLHRLKNVAKGNDSHKCYERFMKINVNSTS 13
           K+L  ++NV   N+   C +RF+  + N+ S
Sbjct: 338 KYLQLIENVIPSNEELICDKRFVDESANNLS 368


>AB194707-1|BAD69622.1|  247|Apis mellifera heme oxygenase protein.
          Length = 247

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 13/70 (18%), Positives = 36/70 (51%)
 Frame = -1

Query: 466 LENIKNTKIMELKNSNVTSSLSKDPNLPSIGEYSIAYLEARMKRMEDILLNKIDQNSQRI 287
           ++ I   K  ++  +N+T+   K+ N+  + ++    +    + +++   NK+ + S+ +
Sbjct: 147 MQKIWPFKEYQMNGNNITNF--KNSNIFQLKQHMRDTMNKIAETLDEDTKNKLIEESKTV 204

Query: 286 VELKNTVVRS 257
             L N ++RS
Sbjct: 205 FILNNEIIRS 214


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 10/40 (25%), Positives = 21/40 (52%)
 Frame = +1

Query: 433 IPLFSCFLYSPDWYICLPSYCL*FYYHYLDYLSMTLSHLL 552
           +P F  ++  P    C PS  + ++  +L Y++  L+ L+
Sbjct: 341 LPFFLMYVIVPFCPDCCPSDRMVYFITWLGYVNSALNPLI 380


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 10/40 (25%), Positives = 21/40 (52%)
 Frame = +1

Query: 433 IPLFSCFLYSPDWYICLPSYCL*FYYHYLDYLSMTLSHLL 552
           +P F  ++  P    C PS  + ++  +L Y++  L+ L+
Sbjct: 341 LPFFLMYVIVPFCPDCCPSDRMVYFITWLGYVNSALNPLI 380


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 10/40 (25%), Positives = 21/40 (52%)
 Frame = +1

Query: 433 IPLFSCFLYSPDWYICLPSYCL*FYYHYLDYLSMTLSHLL 552
           +P F  ++  P    C PS  + ++  +L Y++  L+ L+
Sbjct: 341 LPFFLMYVIVPFCPDCCPSDRMVYFITWLGYVNSALNPLI 380


>AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex
           determiner protein.
          Length = 428

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 8/25 (32%), Positives = 15/25 (60%)
 Frame = -3

Query: 278 KKYSCAFKKKISPYSNSSH*RNLQE 204
           K+YSC+ +++   Y N +  R  +E
Sbjct: 270 KRYSCSREREQKSYKNENSYRKYRE 294


>AF514804-1|AAM51823.1|  537|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha-3 protein.
          Length = 537

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = -1

Query: 193 NEISKYLSPDSNSLIYEELFISKY 122
           N + +YLSPD  S +    FI+++
Sbjct: 437 NTVPRYLSPDVISALKGVRFIAQH 460


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,136
Number of Sequences: 438
Number of extensions: 3344
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19315974
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)