BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P28_pT_J09
(670 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AM292350-1|CAL23162.2| 429|Tribolium castaneum gustatory recept... 23 2.3
AM292328-1|CAL23140.2| 429|Tribolium castaneum gustatory recept... 23 2.3
EF222295-1|ABN79655.1| 146|Tribolium castaneum arginine vasopre... 23 3.0
AM292339-1|CAL23151.2| 387|Tribolium castaneum gustatory recept... 23 3.0
AM292338-1|CAL23150.2| 372|Tribolium castaneum gustatory recept... 23 3.0
EF222293-1|ABN79653.1| 434|Tribolium castaneum ecdysis triggeri... 22 5.2
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 21 6.9
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 21 6.9
S78567-1|AAB34900.1| 141|Tribolium castaneum GABA receptor subu... 21 9.1
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro... 21 9.1
AF264721-1|AAF75273.1| 126|Tribolium castaneum putative cytochr... 21 9.1
>AM292350-1|CAL23162.2| 429|Tribolium castaneum gustatory receptor
candidate 29 protein.
Length = 429
Score = 23.0 bits (47), Expect = 2.3
Identities = 10/35 (28%), Positives = 17/35 (48%)
Frame = +2
Query: 551 YWNFMLIFYNTLQFQMIES*STSQSTAPSIHLNSL 655
YW+F + T+ + +ST P + LNS+
Sbjct: 323 YWSFGFLIVRTVCLCLFGGKVNDESTQPMLVLNSV 357
>AM292328-1|CAL23140.2| 429|Tribolium castaneum gustatory receptor
candidate 7 protein.
Length = 429
Score = 23.0 bits (47), Expect = 2.3
Identities = 10/35 (28%), Positives = 17/35 (48%)
Frame = +2
Query: 551 YWNFMLIFYNTLQFQMIES*STSQSTAPSIHLNSL 655
YW+F + T+ + +ST P + LNS+
Sbjct: 323 YWSFGFLIVRTVCLCLFGGKVNDESTQPMLVLNSV 357
>EF222295-1|ABN79655.1| 146|Tribolium castaneum arginine
vasopressin-like peptide protein.
Length = 146
Score = 22.6 bits (46), Expect = 3.0
Identities = 9/23 (39%), Positives = 10/23 (43%)
Frame = +1
Query: 277 LVERPHCCRCGWNDIVHEEEKCV 345
LV P RC HE E C+
Sbjct: 69 LVGTPETLRCQREGFFHEREPCI 91
>AM292339-1|CAL23151.2| 387|Tribolium castaneum gustatory receptor
candidate 18 protein.
Length = 387
Score = 22.6 bits (46), Expect = 3.0
Identities = 9/27 (33%), Positives = 14/27 (51%)
Frame = -2
Query: 81 VWLHMNXIKLFKQVRDCFVFTALFWLS 1
V +H N + ++V D F L W+S
Sbjct: 221 VQMHSNLVTTSEEVCDSFSIFGLVWIS 247
>AM292338-1|CAL23150.2| 372|Tribolium castaneum gustatory receptor
candidate 17 protein.
Length = 372
Score = 22.6 bits (46), Expect = 3.0
Identities = 9/27 (33%), Positives = 14/27 (51%)
Frame = -2
Query: 81 VWLHMNXIKLFKQVRDCFVFTALFWLS 1
V +H N + ++V D F L W+S
Sbjct: 221 VQMHSNLVTTSEEVCDSFSIFGLVWIS 247
>EF222293-1|ABN79653.1| 434|Tribolium castaneum ecdysis triggering
hormone receptorisoform A protein.
Length = 434
Score = 21.8 bits (44), Expect = 5.2
Identities = 9/36 (25%), Positives = 17/36 (47%)
Frame = -1
Query: 133 LCIILWYFFIINWHIILCLAXYE*XKTFQASKGLLC 26
+C++ W+ + +L +A Y+ F SK C
Sbjct: 190 ICLLAWFIAALFTSPMLVIAEYKQLDYFDGSKVPAC 225
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 21.4 bits (43), Expect = 6.9
Identities = 11/37 (29%), Positives = 18/37 (48%)
Frame = -2
Query: 423 KYLVPSDLTVGQFYFLIRKRIHLRPEDALFFFVNNVI 313
KYL P D + + ++ I LR + FF+ N +
Sbjct: 1242 KYLYPIDENKEEKARIAKELIELRNKSVFAFFMFNAL 1278
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
protein.
Length = 1558
Score = 21.4 bits (43), Expect = 6.9
Identities = 11/37 (29%), Positives = 18/37 (48%)
Frame = -2
Query: 423 KYLVPSDLTVGQFYFLIRKRIHLRPEDALFFFVNNVI 313
KYL P D + + ++ I LR + FF+ N +
Sbjct: 1242 KYLYPIDENKEEKARIAKELIELRNKSVFAFFMFNAL 1278
>S78567-1|AAB34900.1| 141|Tribolium castaneum GABA receptor subunit
protein.
Length = 141
Score = 21.0 bits (42), Expect = 9.1
Identities = 6/11 (54%), Positives = 10/11 (90%)
Frame = +1
Query: 217 SIDIFVGKCYV 249
SID+++G C+V
Sbjct: 129 SIDVYLGTCFV 139
>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
Length = 2700
Score = 21.0 bits (42), Expect = 9.1
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = -1
Query: 325 EQCHSTHICNNGVSLPR 275
E C S ++C NG +P+
Sbjct: 1216 ESCSSFYVCVNGHLVPQ 1232
>AF264721-1|AAF75273.1| 126|Tribolium castaneum putative cytochrome
P450 monooxigenaseCYP4Q2 protein.
Length = 126
Score = 21.0 bits (42), Expect = 9.1
Identities = 7/22 (31%), Positives = 13/22 (59%)
Frame = -2
Query: 318 VIPPTSATMGSLYQEHHDEDFF 253
+IP + T+ +Y HH+ D +
Sbjct: 80 LIPKDTITIIHIYDLHHNPDIY 101
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 147,029
Number of Sequences: 336
Number of extensions: 3057
Number of successful extensions: 12
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17385535
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -