Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P28_pT_J06
(775 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U58751-11|AAB00662.1| 265|Caenorhabditis elegans Trypsin-like p... 121 5e-28
U29380-14|AAA68746.2| 293|Caenorhabditis elegans Trypsin-like p... 108 5e-24
U70848-2|AAB09110.4| 313|Caenorhabditis elegans Trypsin-like pr... 76 2e-14
Z92832-5|CAB07374.2| 292|Caenorhabditis elegans Hypothetical pr... 51 8e-07
U39848-2|AAT81211.1| 279|Caenorhabditis elegans Hypothetical pr... 40 0.001
Z78013-9|CAB01420.2| 297|Caenorhabditis elegans Hypothetical pr... 38 0.008
AF003384-12|AAB54236.2| 331|Caenorhabditis elegans Trypsin-like... 38 0.011
U80440-2|AAK21469.1| 162|Caenorhabditis elegans Hypothetical pr... 33 0.30
AF078157-5|AAN84817.1| 379|Caenorhabditis elegans Hypothetical ... 30 2.1
U12966-4|AAA20616.1| 365|Caenorhabditis elegans Carbonic anhydr... 28 6.4
>U58751-11|AAB00662.1| 265|Caenorhabditis elegans Trypsin-like
protease protein 2 protein.
Length = 265
Score = 121 bits (292), Expect = 5e-28
Identities = 69/206 (33%), Positives = 104/206 (50%), Gaps = 5/206 (2%)
Frame = -2
Query: 774 GGVLITDRHVXTAAHCTRRWDADELY-VRLGEYDLQRXNDSRSYNFKVVEKIQHPNFELS 598
G ++ H+ TAAHC + Y V +G++D + + + + +++I
Sbjct: 55 GASILDKTHLITAAHCFEEDERVSSYEVVVGDWDNNQTDGNEQIFY--LQRIHFYPLYKD 112
Query: 597 SYHNDIAILKLHRPAV-FNTYVWPICLPPADLDLT-NEIATVIGWGTQWYGGPHSNVLME 424
+ +DIAIL++ P + FN Y PICLP D T V GWG+ G ++ L
Sbjct: 113 IFSHDIAILEIPYPGIEFNEYAQPICLPSKDFVYTPGRQCVVSGWGSM--GLRYAERLQA 170
Query: 423 VSVPVWDHQKCVDA--FVDSVFTETVCAGGLEGGKDACQGDSGGPLMYQMSSGRWAVVGV 250
+P+ + CV++ S+ CAG LEGG D+CQGDSGGP + G + + GV
Sbjct: 171 ALIPIINRFDCVNSSQIYSSMSRSAFCAGYLEGGIDSCQGDSGGPFACRREDGAFVLAGV 230
Query: 249 VSWGLRCGEPNHPGLYARVDKYLDWI 172
+SWG C + PG+Y V YL WI
Sbjct: 231 ISWGDGCAQKKQPGIYTMVAPYLSWI 256
>U29380-14|AAA68746.2| 293|Caenorhabditis elegans Trypsin-like
protease protein 1 protein.
Length = 293
Score = 108 bits (259), Expect = 5e-24
Identities = 76/211 (36%), Positives = 101/211 (47%), Gaps = 8/211 (3%)
Frame = -2
Query: 774 GGVLITDRHVXTAAHCTRRWDADELY-VRLGEYDLQRXNDSRSYNFKVVEKIQHPNFEL- 601
GG LI V TAAHC + Y VR+G + R + V HP + +
Sbjct: 85 GGSLIDPNFVLTAAHCFAKDRRPTSYSVRVGGH---RSGSGSPHRVTAVSI--HPWYNIG 139
Query: 600 --SSYHNDIAILKLHRPAVFNTYVWPICLPPADLDLTNEIATVIGWGTQWYGGPHSN-VL 430
SSY D AI+++H P +T PICLP + N + V GWG+ G S L
Sbjct: 140 FPSSY--DFAIMRIHPPVNTSTTARPICLPSLPA-VENRLCVVTGWGSTIEGSSLSAPTL 196
Query: 429 MEVSVPVWDHQKC--VDAFVDSVFTETV-CAGGLEGGKDACQGDSGGPLMYQMSSGRWAV 259
E+ VP+ C + ++ + ++ CAG G D+CQGDSGGPLM G W +
Sbjct: 197 REIHVPLLSTLFCSSLPNYIGRIHLPSMLCAGYSYGKIDSCQGDSGGPLMCARD-GHWEL 255
Query: 258 VGVVSWGLRCGEPNHPGLYARVDKYLDWILL 166
GVVSWG+ C P PG+Y V WI L
Sbjct: 256 TGVVSWGIGCARPGMPGVYGNVHSASTWINL 286
>U70848-2|AAB09110.4| 313|Caenorhabditis elegans Trypsin-like
protease protein 3 protein.
Length = 313
Score = 76.2 bits (179), Expect = 2e-14
Identities = 65/221 (29%), Positives = 99/221 (44%), Gaps = 20/221 (9%)
Frame = -2
Query: 774 GGVLITDRHVXTAAHCTRRWDADELYVRLGEYDLQRXNDSRSYNFKVVEKIQHPNFELSS 595
G +I D + TAAHC A +L R Y ++ ++R +F V E H + +
Sbjct: 67 GATVIDDFWLVTAAHC-----ALQLQTRSFVY-VREPKNNRERSFSVKEAYIHSGYNNQT 120
Query: 594 YHNDIAILKLHRPAVFNTYVWPICLPPADLDLTNEI--ATVIGWGTQW----YGGP---H 442
NDIA+L++ + + P+CL D L + VIG+G G P +
Sbjct: 121 ADNDIALLRISSD-LSKLGIKPVCLVHDDSKLLKQYKNGVVIGYGLTLGEDSSGEPKLIN 179
Query: 441 SNVLMEVSVPVWDHQKCVDA--FVDSVFTET----VCAGGLEGGKDACQGDSGGPLMYQM 280
S L SVP+ CV F+ + + +CAG G GDSGGPL+
Sbjct: 180 SQTLQSTSVPIISDDDCVKTWRFLSLLSVKITGYQICAGAYLHG--TAPGDSGGPLLIHK 237
Query: 279 SSGRWAVVGVVSWGLR-----CGEPNHPGLYARVDKYLDWI 172
S+G + +G+ S+G + PG+Y R+ KY+ WI
Sbjct: 238 SNGEYVQIGITSYGADGLDGVIDQGKFPGVYTRISKYVPWI 278
>Z92832-5|CAB07374.2| 292|Caenorhabditis elegans Hypothetical
protein F31D4.6 protein.
Length = 292
Score = 51.2 bits (117), Expect = 8e-07
Identities = 43/147 (29%), Positives = 70/147 (47%), Gaps = 8/147 (5%)
Frame = -2
Query: 588 NDIAILKLHRPAVFNTYVWPICLPPADLDLTNEIATVIGWGTQWYGGPHSNVLMEVSVPV 409
+D AI+++ + F+ V PICLP ++ T +A V GWG + S L+ +P+
Sbjct: 143 HDWAIVEVEKRIHFSENVRPICLPRPNMYYTKSLA-VPGWGRIFN---ESGPLIH-EIPM 197
Query: 408 WDHQKCVDAFVDSVFTET---VCAGGLE----GGKDACQGDSGGPLMYQMSS-GRWAVVG 253
+ C + D + + +CA + C GDSGG L Y+ + GR ++
Sbjct: 198 RIDRDCKRPWSDRLPADADDFICATSMNVSNYSAPRTCHGDSGGGLEYRDDNYGRAFLIA 257
Query: 252 VVSWGLRCGEPNHPGLYARVDKYLDWI 172
+ S+G R N + RVD YL+ I
Sbjct: 258 ITSFGTRGCPSNMLARFTRVDMYLNLI 284
>U39848-2|AAT81211.1| 279|Caenorhabditis elegans Hypothetical
protein B0286.6 protein.
Length = 279
Score = 40.3 bits (90), Expect = 0.001
Identities = 34/124 (27%), Positives = 54/124 (43%), Gaps = 2/124 (1%)
Frame = -2
Query: 588 NDIAILKLHRPAVFNTYVWPICLPPA-DLDLTNEIATVIGWGTQWYGGPHSNVLMEVSVP 412
NDIA+ +L P F+ ++P CLP A + E G+ YG S+ ++E
Sbjct: 121 NDIAVFELEEPIEFSKDIFPACLPSAPKIPRIRE----TGYKLFGYGRDPSDSVLESGKL 176
Query: 411 VWDHQKCVDAFVDSVFTETVCAGGLEGGKDACQGDSG-GPLMYQMSSGRWAVVGVVSWGL 235
+ + D + C + G +C GDSG G + + +VGV+S G+
Sbjct: 177 KSLYSFVAECSDDFPYGGVYCTSAVNRGL-SCDGDSGSGVVRTSDTRNVQVLVGVLSAGM 235
Query: 234 RCGE 223
C E
Sbjct: 236 PCPE 239
>Z78013-9|CAB01420.2| 297|Caenorhabditis elegans Hypothetical
protein F15B9.5 protein.
Length = 297
Score = 37.9 bits (84), Expect = 0.008
Identities = 54/199 (27%), Positives = 80/199 (40%), Gaps = 22/199 (11%)
Frame = -2
Query: 774 GGVLITDRHVXTAAHCTRRWD--ADELYVRLGEYDLQRXNDS----RSYNFKVVEKIQHP 613
GGVLI V T+AHC D A V LG+ L + +D RS+ + +K +
Sbjct: 47 GGVLIAPSIVITSAHCVFSGDDFAVTAKVTLGDVHLNKHDDGEQEFRSHAMAISKKFFN- 105
Query: 612 NFELSSYHNDIAILKL-------HRPAVFNTYVWPI--------CLPPADLDLTNEIATV 478
+ S ++D+A++ L H P P P L L + V
Sbjct: 106 --DASEANDDVAVIFLPQRADVCHSPLSLQIAKLPSTGSVNFKETAPLTQLQLETSVCYV 163
Query: 477 IGWGTQWYGGPHSNVLMEVSVPVWDHQKCVDAFVDSV-FTETVCAGGLEGGKDACQGDSG 301
GWG N + S V Q V+ V + + + A + G AC GDSG
Sbjct: 164 AGWGKT------ENKTAKYSDSV--RQMMVNLSVRRIGKRKYLIAKAVTGSSRACMGDSG 215
Query: 300 GPLMYQMSSGRWAVVGVVS 244
P +Y +G+ +VG V+
Sbjct: 216 SP-VYCFVNGKRILVGTVA 233
>AF003384-12|AAB54236.2| 331|Caenorhabditis elegans Trypsin-like
protease protein 5 protein.
Length = 331
Score = 37.5 bits (83), Expect = 0.011
Identities = 33/126 (26%), Positives = 54/126 (42%), Gaps = 6/126 (4%)
Frame = -2
Query: 588 NDIAILKLHRPAVFNTYVWPICLP--PADLDLTNEIATVIGWGT---QWYGGPHSNVLME 424
NDI IL+L CLP P + T GWG+ + + ++
Sbjct: 176 NDIVILELESTIDDVEGANYACLPFLPEVNIQSGANVTSFGWGSDPGKGFDNAAFPMIQV 235
Query: 423 VSVPVWDHQKCVDAFVDSVFTETVCAGGLEGGKDACQGDSGGPLMYQMS-SGRWAVVGVV 247
+++ C + + S+ ++ C E K+ C GDSGG L + S S R ++ +V
Sbjct: 236 LTLATETLATCEENWGTSIPFDSFCTAE-EEDKNVCSGDSGGGLTFHQSDSAREFIIAIV 294
Query: 246 SWGLRC 229
S+G C
Sbjct: 295 SYGSDC 300
Score = 30.3 bits (65), Expect = 1.6
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = -2
Query: 774 GGVLITDRHVXTAAHCTRR 718
GG LIT +HV TAAHC ++
Sbjct: 63 GGTLITLKHVLTAAHCFQK 81
>U80440-2|AAK21469.1| 162|Caenorhabditis elegans Hypothetical
protein T21E12.3 protein.
Length = 162
Score = 32.7 bits (71), Expect = 0.30
Identities = 16/41 (39%), Positives = 24/41 (58%)
Frame = -2
Query: 351 CAGGLEGGKDACQGDSGGPLMYQMSSGRWAVVGVVSWGLRC 229
C + + AC GDSGG ++ Q+ + R VVGV+ G+ C
Sbjct: 62 CTKSISKNQLACTGDSGGGVV-QLINDRVTVVGVIYEGVTC 101
>AF078157-5|AAN84817.1| 379|Caenorhabditis elegans Hypothetical
protein F25E5.7 protein.
Length = 379
Score = 29.9 bits (64), Expect = 2.1
Identities = 31/119 (26%), Positives = 53/119 (44%), Gaps = 1/119 (0%)
Frame = -2
Query: 582 IAILKLHRPAVFNTYVWPICLPPADLDLTNEIATVIGWGTQWYGGPHSNVLMEVSVPVWD 403
+ IL+L +P N +WP+C+ D L + + G G +S +
Sbjct: 166 VLILELKKPLELNPSIWPVCI-SNDPQLFDRSSDFSVSGIDAKGVLNSGLF--------- 215
Query: 402 HQKCVDAFVDSVFTETVCAGGLEGGKDACQGDSGGPLMYQMSSGRWAVVGV-VSWGLRC 229
K V+ V+ F+ CA ++ + C DSGG + + SG+ V+GV V+ + C
Sbjct: 216 --KPVNCSVEGPFS---CAEAVDNKQRMCAYDSGGSAISNV-SGQNTVLGVYVTGNMNC 268
>U12966-4|AAA20616.1| 365|Caenorhabditis elegans Carbonic anhydrase
protein 1 protein.
Length = 365
Score = 28.3 bits (60), Expect = 6.4
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +3
Query: 264 PNVHLTSGTLTGLRYRPDRHPFRL 335
P+V++TSG L G RYR R F +
Sbjct: 169 PSVNITSGPLYGYRYRVQRIDFHM 192
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,622,189
Number of Sequences: 27780
Number of extensions: 380065
Number of successful extensions: 985
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 923
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 975
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1861650246
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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