Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P28_pT_J04
(762 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_01_0428 + 3055163-3055573 235 4e-62
06_01_0427 - 3054204-3054614 235 4e-62
06_01_0423 - 3039527-3039937 235 4e-62
05_04_0449 - 21355439-21355849 235 4e-62
04_03_0909 + 20748653-20749063 235 4e-62
01_06_1456 + 37507156-37507566 235 4e-62
06_01_0217 - 1644696-1645034,1645143-1645214 233 9e-62
11_01_0348 - 2607315-2607424,2608634-2609030 229 2e-60
06_01_0425 - 3045557-3046004,3046852-3046856 225 2e-59
03_03_0212 + 15479850-15479921,15479965-15480083,15480175-154802... 219 3e-57
02_03_0108 - 15324922-15325092,15325189-15325279,15325511-15325596 199 2e-51
12_02_0048 - 12852335-12852745 198 3e-51
02_03_0107 - 15303890-15304060,15304158-15304248,15304505-153046... 185 4e-47
12_02_0047 - 12836779-12837189 184 5e-47
05_05_0297 - 23921648-23921758,23922011-23922089,23922774-239228... 130 9e-31
04_04_0062 + 22437653-22437724,22437866-22437943,22438222-22438392 111 6e-25
09_04_0353 + 16915618-16916934 29 3.1
03_01_0575 + 4247431-4247489,4248475-4248547,4248792-4249229,425... 29 4.0
01_06_0746 - 31636024-31641396 24 7.2
03_06_0244 + 32613914-32614666 28 9.3
>06_01_0428 + 3055163-3055573
Length = 136
Score = 235 bits (574), Expect = 4e-62
Identities = 113/121 (93%), Positives = 119/121 (98%)
Frame = -3
Query: 760 APRKQLXTKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREI 581
APRKQL TKAARKSAP+TGGVKKPHR+RPGTVALREIR+YQKSTELLIRKLPFQRLVREI
Sbjct: 16 APRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREI 75
Query: 580 AQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER 401
AQDFKTDLRFQS+A+ ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER
Sbjct: 76 AQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER 135
Query: 400 A 398
A
Sbjct: 136 A 136
>06_01_0427 - 3054204-3054614
Length = 136
Score = 235 bits (574), Expect = 4e-62
Identities = 113/121 (93%), Positives = 119/121 (98%)
Frame = -3
Query: 760 APRKQLXTKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREI 581
APRKQL TKAARKSAP+TGGVKKPHR+RPGTVALREIR+YQKSTELLIRKLPFQRLVREI
Sbjct: 16 APRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREI 75
Query: 580 AQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER 401
AQDFKTDLRFQS+A+ ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER
Sbjct: 76 AQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER 135
Query: 400 A 398
A
Sbjct: 136 A 136
>06_01_0423 - 3039527-3039937
Length = 136
Score = 235 bits (574), Expect = 4e-62
Identities = 113/121 (93%), Positives = 119/121 (98%)
Frame = -3
Query: 760 APRKQLXTKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREI 581
APRKQL TKAARKSAP+TGGVKKPHR+RPGTVALREIR+YQKSTELLIRKLPFQRLVREI
Sbjct: 16 APRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREI 75
Query: 580 AQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER 401
AQDFKTDLRFQS+A+ ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER
Sbjct: 76 AQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER 135
Query: 400 A 398
A
Sbjct: 136 A 136
>05_04_0449 - 21355439-21355849
Length = 136
Score = 235 bits (574), Expect = 4e-62
Identities = 113/121 (93%), Positives = 119/121 (98%)
Frame = -3
Query: 760 APRKQLXTKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREI 581
APRKQL TKAARKSAP+TGGVKKPHR+RPGTVALREIR+YQKSTELLIRKLPFQRLVREI
Sbjct: 16 APRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREI 75
Query: 580 AQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER 401
AQDFKTDLRFQS+A+ ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER
Sbjct: 76 AQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER 135
Query: 400 A 398
A
Sbjct: 136 A 136
>04_03_0909 + 20748653-20749063
Length = 136
Score = 235 bits (574), Expect = 4e-62
Identities = 113/121 (93%), Positives = 119/121 (98%)
Frame = -3
Query: 760 APRKQLXTKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREI 581
APRKQL TKAARKSAP+TGGVKKPHR+RPGTVALREIR+YQKSTELLIRKLPFQRLVREI
Sbjct: 16 APRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREI 75
Query: 580 AQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER 401
AQDFKTDLRFQS+A+ ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER
Sbjct: 76 AQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER 135
Query: 400 A 398
A
Sbjct: 136 A 136
>01_06_1456 + 37507156-37507566
Length = 136
Score = 235 bits (574), Expect = 4e-62
Identities = 113/121 (93%), Positives = 119/121 (98%)
Frame = -3
Query: 760 APRKQLXTKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREI 581
APRKQL TKAARKSAP+TGGVKKPHR+RPGTVALREIR+YQKSTELLIRKLPFQRLVREI
Sbjct: 16 APRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREI 75
Query: 580 AQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER 401
AQDFKTDLRFQS+A+ ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER
Sbjct: 76 AQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER 135
Query: 400 A 398
A
Sbjct: 136 A 136
>06_01_0217 - 1644696-1645034,1645143-1645214
Length = 136
Score = 233 bits (571), Expect = 9e-62
Identities = 114/121 (94%), Positives = 118/121 (97%)
Frame = -3
Query: 760 APRKQLXTKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREI 581
APRKQL TKAARKSAP+TGGVKKPHRYRPGTVALREIR+YQKSTELLIRKLPFQRLVREI
Sbjct: 16 APRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREI 75
Query: 580 AQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER 401
AQDFKTDLRFQS A+ ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER
Sbjct: 76 AQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER 135
Query: 400 A 398
A
Sbjct: 136 A 136
>11_01_0348 - 2607315-2607424,2608634-2609030
Length = 168
Score = 229 bits (560), Expect = 2e-60
Identities = 110/118 (93%), Positives = 116/118 (98%)
Frame = -3
Query: 760 APRKQLXTKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREI 581
APRKQL TKAARKSAP+TGGVKKPHR+RPGTVALREIR+YQKSTELLIRKLPFQRLVREI
Sbjct: 16 APRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREI 75
Query: 580 AQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRG 407
AQDFKTDLRFQS+A+ ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRG
Sbjct: 76 AQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRG 133
>06_01_0425 - 3045557-3046004,3046852-3046856
Length = 150
Score = 225 bits (551), Expect = 2e-59
Identities = 109/119 (91%), Positives = 115/119 (96%)
Frame = -3
Query: 754 RKQLXTKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQ 575
RKQL TKA KSAP+TGGVKKPHR+RPGTVALREIR+YQKSTELLIRKLPFQRLVREIAQ
Sbjct: 32 RKQLATKATCKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQ 91
Query: 574 DFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 398
DFKTDLRFQS+A+ ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct: 92 DFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 150
>03_03_0212 +
15479850-15479921,15479965-15480083,15480175-15480265,
15480363-15480533
Length = 150
Score = 219 bits (534), Expect = 3e-57
Identities = 106/116 (91%), Positives = 112/116 (96%)
Frame = -3
Query: 745 LXTKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFK 566
+ +AARKSAP+TGGVKKPHRYRPGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFK
Sbjct: 35 ISVQAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFK 94
Query: 565 TDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 398
TDLRFQS A+ ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct: 95 TDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 150
>02_03_0108 - 15324922-15325092,15325189-15325279,15325511-15325596
Length = 115
Score = 199 bits (486), Expect = 2e-51
Identities = 97/111 (87%), Positives = 104/111 (93%)
Frame = -3
Query: 733 AARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLR 554
AARKSAP GGVKKPHRYRPGTVALREIR+YQK+TELLIRKLPFQRLVREIAQ FK D+R
Sbjct: 4 AARKSAPCIGGVKKPHRYRPGTVALREIRKYQKNTELLIRKLPFQRLVREIAQLFKHDMR 63
Query: 553 FQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER 401
FQS A+ ALQEA+EAYLVGLFEDTNLCAIH+KRVTIM KD+QLARRIRGER
Sbjct: 64 FQSHAVLALQEAAEAYLVGLFEDTNLCAIHSKRVTIMSKDVQLARRIRGER 114
>12_02_0048 - 12852335-12852745
Length = 136
Score = 198 bits (484), Expect = 3e-51
Identities = 95/120 (79%), Positives = 108/120 (90%)
Frame = -3
Query: 757 PRKQLXTKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIA 578
PRK L K ARKSAP+ G+KKPHR++PGTVALREIR YQKSTELLIRKLPFQRLV+EIA
Sbjct: 17 PRKLLVMKVARKSAPTMAGLKKPHRFKPGTVALREIRTYQKSTELLIRKLPFQRLVQEIA 76
Query: 577 QDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 398
QD ++ +RFQS+A+ ALQEA+E YLVGLF+DTNLC IHAKRVTIMPKDIQLARRIRGE+A
Sbjct: 77 QDVRSYVRFQSSAVVALQEAAETYLVGLFKDTNLCVIHAKRVTIMPKDIQLARRIRGEKA 136
>02_03_0107 -
15303890-15304060,15304158-15304248,15304505-15304614,
15304715-15304784,15306365-15306558
Length = 211
Score = 185 bits (450), Expect = 4e-47
Identities = 92/110 (83%), Positives = 100/110 (90%)
Frame = -3
Query: 730 ARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRF 551
ARKS P G VKKP R+RPGTVALREIR+YQK+TELLIRKLPFQRLVREIAQ FK D+RF
Sbjct: 102 ARKSVPFIG-VKKPRRHRPGTVALREIRKYQKNTELLIRKLPFQRLVREIAQHFKHDMRF 160
Query: 550 QSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER 401
QS A+ ALQEA+EAYLVGLFEDTNLCAIH+KRVTIM KD+QLARRIRGER
Sbjct: 161 QSHAVLALQEAAEAYLVGLFEDTNLCAIHSKRVTIMSKDVQLARRIRGER 210
>12_02_0047 - 12836779-12837189
Length = 136
Score = 184 bits (449), Expect = 5e-47
Identities = 90/120 (75%), Positives = 100/120 (83%)
Frame = -3
Query: 757 PRKQLXTKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIA 578
PRK L K ARKSAP G+KKPHR+ P VALREIR YQKSTELLIRKLPFQRLV+EI
Sbjct: 17 PRKLLVMKVARKSAPMMAGLKKPHRFNPWIVALREIRTYQKSTELLIRKLPFQRLVQEIT 76
Query: 577 QDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 398
QD ++ +RFQS+A+ LQEA+E YLVGLFEDTNLC IHAKRVTIMPKDIQLAR I GE+A
Sbjct: 77 QDIRSYVRFQSSAMAVLQEAAETYLVGLFEDTNLCVIHAKRVTIMPKDIQLARCIGGEKA 136
>05_05_0297 -
23921648-23921758,23922011-23922089,23922774-23922822,
23923180-23923255,23923693-23923767,23923862-23923992,
23924830-23924935
Length = 208
Score = 130 bits (315), Expect = 9e-31
Identities = 66/100 (66%), Positives = 80/100 (80%), Gaps = 1/100 (1%)
Frame = -3
Query: 697 KKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDL-RFQSAAIGALQE 521
+KPHR+RPGTVALREIR++QK+TELLI PF RLVREI + D+ R+ A+ ALQE
Sbjct: 45 RKPHRFRPGTVALREIRKFQKTTELLIPFAPFSRLVREITDFYSKDVSRWTLEALLALQE 104
Query: 520 ASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER 401
A+E +LV +FE +NLCAIHAKRVTIM KD+QLARRI G R
Sbjct: 105 AAEYHLVDIFEVSNLCAIHAKRVTIMQKDMQLARRIGGRR 144
>04_04_0062 + 22437653-22437724,22437866-22437943,22438222-22438392
Length = 106
Score = 111 bits (267), Expect = 6e-25
Identities = 72/121 (59%), Positives = 80/121 (66%)
Frame = -3
Query: 760 APRKQLXTKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREI 581
APRKQL TKAARKSAP+ T +++ RY P++R
Sbjct: 16 APRKQLATKAARKSAPT-------------TGGVKKPHRYP----------PWKRCS--- 49
Query: 580 AQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER 401
TDLRFQS A+ ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER
Sbjct: 50 ----STDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER 105
Query: 400 A 398
A
Sbjct: 106 A 106
>09_04_0353 + 16915618-16916934
Length = 438
Score = 29.5 bits (63), Expect = 3.1
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = +2
Query: 404 FTTDSSSKLNILRHDGHTFGVNSTQVGV 487
F DS+S +L ++ TFG NST+V V
Sbjct: 163 FYGDSASSAGVLANETFTFGTNSTRVAV 190
>03_01_0575 +
4247431-4247489,4248475-4248547,4248792-4249229,
4252122-4253339
Length = 595
Score = 29.1 bits (62), Expect = 4.0
Identities = 21/71 (29%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
Frame = -3
Query: 679 RPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLV 500
RP V L + Y+ + EL + K F L R+ + + L FQS + E+Y+
Sbjct: 171 RPRPVYLIDFACYKPADELKVSKAEFIDLARKSGKFDEDSLAFQSRLLAKSGIGDESYMP 230
Query: 499 G-LFEDTNLCA 470
+FE CA
Sbjct: 231 RCVFEPGTNCA 241
>01_06_0746 - 31636024-31641396
Length = 1790
Score = 23.8 bits (49), Expect(2) = 7.2
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = -3
Query: 256 YATMKYENDVFHQNSVIGLLAKPR 185
+ +++YENDV+ N GL +PR
Sbjct: 1035 FGSVQYENDVYPMNG--GLSQRPR 1056
Score = 22.6 bits (46), Expect(2) = 7.2
Identities = 7/19 (36%), Positives = 14/19 (73%)
Frame = -3
Query: 187 RYGHVILCKVH*SQKKPMD 131
+Y +V+ C+++ +QKK D
Sbjct: 1081 KYTYVVACQIYGNQKKAKD 1099
>03_06_0244 + 32613914-32614666
Length = 250
Score = 27.9 bits (59), Expect = 9.3
Identities = 13/38 (34%), Positives = 18/38 (47%)
Frame = +3
Query: 522 SWRAPMAADWKRKSVLKS*AISLTRRWKGSLRISNSVD 635
SW A WK +V + + RRWK S+ S+D
Sbjct: 207 SWARHQAMQWKASAVSRLVPAAHRRRWKASVVSRRSLD 244
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,282,330
Number of Sequences: 37544
Number of extensions: 335581
Number of successful extensions: 803
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 781
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 802
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2039640244
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -