Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_pT_J02
         (429 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    24   0.70 
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    21   6.6  
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    20   8.7  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    20   8.7  

>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 23.8 bits (49), Expect = 0.70
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = +1

Query: 298 DLIHMLQTNFTKLRILHHK*IFKIGTAF 381
           +L H+L+T + K+R  + K IF     F
Sbjct: 90  NLTHLLETQYAKIRTENQKKIFDESVIF 117



 Score = 23.0 bits (47), Expect = 1.2
 Identities = 11/35 (31%), Positives = 19/35 (54%)
 Frame = -3

Query: 277 FEEILFHTLNTLKTYEGVIVL*KCKTCVIMCRTFY 173
           +  IL +T     TY+G++V+    + V +C T Y
Sbjct: 235 YNVILRYTKIVSDTYQGILVVQFFCSLVALCLTMY 269


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 20.6 bits (41), Expect = 6.6
 Identities = 6/21 (28%), Positives = 13/21 (61%)
 Frame = -3

Query: 193 IMCRTFYYYRILKRGLLSNKI 131
           + C +  +Y+  K G+L N++
Sbjct: 73  LFCASLSFYKAFKIGILLNQL 93


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 20.2 bits (40), Expect = 8.7
 Identities = 8/23 (34%), Positives = 11/23 (47%)
 Frame = +1

Query: 7   FIIVGVPFIELFPICFLKSLMWI 75
           F+IV + F  +   CF     WI
Sbjct: 86  FLIVALAFQVILNSCFCDPAKWI 108


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 20.2 bits (40), Expect = 8.7
 Identities = 8/23 (34%), Positives = 11/23 (47%)
 Frame = +1

Query: 7   FIIVGVPFIELFPICFLKSLMWI 75
           F+IV + F  +   CF     WI
Sbjct: 86  FLIVALAFQVILNSCFCDPAKWI 108


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,828
Number of Sequences: 336
Number of extensions: 1882
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used:  9460170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)