Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_pT_I24
         (720 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_02_0536 + 11304298-11304400,11304731-11305797,11306026-113064...    31   1.2  

>02_02_0536 +
           11304298-11304400,11304731-11305797,11306026-11306416,
           11307164-11308041
          Length = 812

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 15/55 (27%), Positives = 32/55 (58%), Gaps = 4/55 (7%)
 Frame = +2

Query: 467 IFRVETTIHKKIEVHIISTGYK----HRKITITYQKAFVKIRTIS*KYVHFTLNG 619
           I+ V+T IHK + +++ ++GY+       I++TY+  +  + T++    H+T  G
Sbjct: 31  IYHVDTNIHKVLTLNLQTSGYELEPGSENISVTYRVYYKAMTTLAPCAKHYTPKG 85


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,055,408
Number of Sequences: 37544
Number of extensions: 287122
Number of successful extensions: 528
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 524
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 528
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1874582652
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)