Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_pT_I24
         (720 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger transc...    26   1.4  
X98186-1|CAA66861.1|  269|Anopheles gambiae put. S3a ribosomal p...    23   9.5  

>AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger
           transcription factor pannier protein.
          Length = 537

 Score = 25.8 bits (54), Expect = 1.4
 Identities = 10/35 (28%), Positives = 17/35 (48%)
 Frame = +3

Query: 93  LASSIKSLEATNT*QVFSMHYKRHTGHHATMADLS 197
           + S++     T++      H+  H  HH T ADL+
Sbjct: 485 MGSTVNGASLTHSHHAHPHHHHHHHHHHPTAADLA 519


>X98186-1|CAA66861.1|  269|Anopheles gambiae put. S3a ribosomal
           protein homologue protein.
          Length = 269

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = +3

Query: 435 KICYVTHILFLFSVSKLRYIKKSRFTLFQL 524
           K C V + L    + K++ +KK RF L  L
Sbjct: 202 KACQVVYPLHDVYIRKVKVLKKPRFDLSSL 231


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 683,564
Number of Sequences: 2352
Number of extensions: 12008
Number of successful extensions: 4
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 73181328
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)