Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_pT_I24
         (720 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT024251-1|ABC86313.1|   31|Drosophila melanogaster IP15867p pro...    30   2.8  
AE013599-1457|AAF58528.2| 1977|Drosophila melanogaster CG13162-P...    30   2.8  

>BT024251-1|ABC86313.1|   31|Drosophila melanogaster IP15867p
           protein.
          Length = 31

 Score = 30.3 bits (65), Expect = 2.8
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = +3

Query: 381 RDIFFYFSFSFLRPCLYIKICYVTHILFLF 470
           R  FF+F F F+  CLYI +     +L LF
Sbjct: 2   RVFFFFFFFLFVNKCLYIYLLLANKLLNLF 31


>AE013599-1457|AAF58528.2| 1977|Drosophila melanogaster CG13162-PA
            protein.
          Length = 1977

 Score = 30.3 bits (65), Expect = 2.8
 Identities = 19/56 (33%), Positives = 31/56 (55%)
 Frame = -2

Query: 380  RTQTINIFRLLLL*HGNLSYHTSVVNSKLLKTYGNTKIKSIKTRLWPAKQRKYHLQ 213
            + Q+I I  LL+L +    +H+S  NS++++T     I  I  R+WP     YHL+
Sbjct: 1653 KAQSI-ISNLLVLINMLSQWHSSP-NSEIIQTSMAANIAKILIRIWPWLSHSYHLK 1706


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,826,020
Number of Sequences: 53049
Number of extensions: 524652
Number of successful extensions: 921
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 897
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 921
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3211306956
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)