SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_pT_I23
         (407 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC107478-1|AAI07479.1|  416|Homo sapiens C6orf205 protein protein.     31   1.5  
BC105737-1|AAI05738.1|  566|Homo sapiens chromosome 6 open readi...    31   1.5  
BC105736-1|AAI05737.1|  112|Homo sapiens C6orf205 protein protein.     31   1.5  
BC105735-1|AAI05736.1|  566|Homo sapiens chromosome 6 open readi...    31   1.5  
AY358415-1|AAQ88781.1|  596|Homo sapiens KMQK697 protein.              31   1.5  
AL773541-7|CAI18456.1|  626|Homo sapiens chromosome 6 open readi...    31   1.5  
AL669830-8|CAI18008.1|  566|Homo sapiens chromosome 6 open readi...    31   1.5  
AL663093-1|CAI17705.1|  566|Homo sapiens chromosome 6 open readi...    31   1.5  
DQ310704-1|ABC33805.1| 1873|Homo sapiens akt substrate AS250 pro...    29   4.6  
AL161658-3|CAI40814.1| 1739|Homo sapiens RP11-470C13.2 protein.        29   4.6  
AL121896-1|CAI39939.1| 1739|Homo sapiens RP11-470C13.2 protein.        29   4.6  
AL078634-2|CAI95626.1| 1739|Homo sapiens RP11-470C13.2 protein.        29   4.6  
AB033098-1|BAA86586.1| 1023|Homo sapiens KIAA1272 protein protein.     29   4.6  

>BC107478-1|AAI07479.1|  416|Homo sapiens C6orf205 protein protein.
          Length = 416

 Score = 31.1 bits (67), Expect = 1.5
 Identities = 11/17 (64%), Positives = 12/17 (70%), Gaps = 1/17 (5%)
 Frame = -1

Query: 203 NHGDIHR-RWLPNWLWQ 156
           NHG  HR RW PNW W+
Sbjct: 383 NHGAPHRPRWSPNWFWR 399


>BC105737-1|AAI05738.1|  566|Homo sapiens chromosome 6 open reading
           frame 205 protein.
          Length = 566

 Score = 31.1 bits (67), Expect = 1.5
 Identities = 11/17 (64%), Positives = 12/17 (70%), Gaps = 1/17 (5%)
 Frame = -1

Query: 203 NHGDIHR-RWLPNWLWQ 156
           NHG  HR RW PNW W+
Sbjct: 533 NHGAPHRPRWSPNWFWR 549


>BC105736-1|AAI05737.1|  112|Homo sapiens C6orf205 protein protein.
          Length = 112

 Score = 31.1 bits (67), Expect = 1.5
 Identities = 11/17 (64%), Positives = 12/17 (70%), Gaps = 1/17 (5%)
 Frame = -1

Query: 203 NHGDIHR-RWLPNWLWQ 156
           NHG  HR RW PNW W+
Sbjct: 79  NHGAPHRPRWSPNWFWR 95


>BC105735-1|AAI05736.1|  566|Homo sapiens chromosome 6 open reading
           frame 205 protein.
          Length = 566

 Score = 31.1 bits (67), Expect = 1.5
 Identities = 11/17 (64%), Positives = 12/17 (70%), Gaps = 1/17 (5%)
 Frame = -1

Query: 203 NHGDIHR-RWLPNWLWQ 156
           NHG  HR RW PNW W+
Sbjct: 533 NHGAPHRPRWSPNWFWR 549


>AY358415-1|AAQ88781.1|  596|Homo sapiens KMQK697 protein.
          Length = 596

 Score = 31.1 bits (67), Expect = 1.5
 Identities = 11/17 (64%), Positives = 12/17 (70%), Gaps = 1/17 (5%)
 Frame = -1

Query: 203 NHGDIHR-RWLPNWLWQ 156
           NHG  HR RW PNW W+
Sbjct: 563 NHGAPHRPRWSPNWFWR 579


>AL773541-7|CAI18456.1|  626|Homo sapiens chromosome 6 open reading
           frame 205 protein.
          Length = 626

 Score = 31.1 bits (67), Expect = 1.5
 Identities = 11/17 (64%), Positives = 12/17 (70%), Gaps = 1/17 (5%)
 Frame = -1

Query: 203 NHGDIHR-RWLPNWLWQ 156
           NHG  HR RW PNW W+
Sbjct: 593 NHGAPHRPRWSPNWFWR 609


>AL669830-8|CAI18008.1|  566|Homo sapiens chromosome 6 open reading
           frame 205 protein.
          Length = 566

 Score = 31.1 bits (67), Expect = 1.5
 Identities = 11/17 (64%), Positives = 12/17 (70%), Gaps = 1/17 (5%)
 Frame = -1

Query: 203 NHGDIHR-RWLPNWLWQ 156
           NHG  HR RW PNW W+
Sbjct: 533 NHGAPHRPRWSPNWFWR 549


>AL663093-1|CAI17705.1|  566|Homo sapiens chromosome 6 open reading
           frame 205 protein.
          Length = 566

 Score = 31.1 bits (67), Expect = 1.5
 Identities = 11/17 (64%), Positives = 12/17 (70%), Gaps = 1/17 (5%)
 Frame = -1

Query: 203 NHGDIHR-RWLPNWLWQ 156
           NHG  HR RW PNW W+
Sbjct: 533 NHGAPHRPRWSPNWFWR 549


>DQ310704-1|ABC33805.1| 1873|Homo sapiens akt substrate AS250 protein.
          Length = 1873

 Score = 29.5 bits (63), Expect = 4.6
 Identities = 13/39 (33%), Positives = 23/39 (58%)
 Frame = +3

Query: 285  ITPSIDGEVTLKHFIPDTLISNSTVTHNAYCRNISVDSI 401
            +  +I G   +KH++ + L+ N+T   N Y R I+V S+
Sbjct: 1127 VNEAITGTEDVKHYLINILLKNATEEPNEYARCIAVCSL 1165


>AL161658-3|CAI40814.1| 1739|Homo sapiens RP11-470C13.2 protein.
          Length = 1739

 Score = 29.5 bits (63), Expect = 4.6
 Identities = 13/39 (33%), Positives = 23/39 (58%)
 Frame = +3

Query: 285  ITPSIDGEVTLKHFIPDTLISNSTVTHNAYCRNISVDSI 401
            +  +I G   +KH++ + L+ N+T   N Y R I+V S+
Sbjct: 943  VNEAITGTEDVKHYLINILLKNATEEPNEYARCIAVCSL 981


>AL121896-1|CAI39939.1| 1739|Homo sapiens RP11-470C13.2 protein.
          Length = 1739

 Score = 29.5 bits (63), Expect = 4.6
 Identities = 13/39 (33%), Positives = 23/39 (58%)
 Frame = +3

Query: 285  ITPSIDGEVTLKHFIPDTLISNSTVTHNAYCRNISVDSI 401
            +  +I G   +KH++ + L+ N+T   N Y R I+V S+
Sbjct: 943  VNEAITGTEDVKHYLINILLKNATEEPNEYARCIAVCSL 981


>AL078634-2|CAI95626.1| 1739|Homo sapiens RP11-470C13.2 protein.
          Length = 1739

 Score = 29.5 bits (63), Expect = 4.6
 Identities = 13/39 (33%), Positives = 23/39 (58%)
 Frame = +3

Query: 285  ITPSIDGEVTLKHFIPDTLISNSTVTHNAYCRNISVDSI 401
            +  +I G   +KH++ + L+ N+T   N Y R I+V S+
Sbjct: 943  VNEAITGTEDVKHYLINILLKNATEEPNEYARCIAVCSL 981


>AB033098-1|BAA86586.1| 1023|Homo sapiens KIAA1272 protein protein.
          Length = 1023

 Score = 29.5 bits (63), Expect = 4.6
 Identities = 13/39 (33%), Positives = 23/39 (58%)
 Frame = +3

Query: 285 ITPSIDGEVTLKHFIPDTLISNSTVTHNAYCRNISVDSI 401
           +  +I G   +KH++ + L+ N+T   N Y R I+V S+
Sbjct: 315 VNEAITGTEDVKHYLINILLKNATEEPNEYARCIAVCSL 353


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 56,477,705
Number of Sequences: 237096
Number of extensions: 1137014
Number of successful extensions: 2692
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 2617
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2692
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 3043111070
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -