Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P28_pT_I23
(407 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z79601-6|CAB01887.1| 872|Caenorhabditis elegans Hypothetical pr... 31 0.42
Z79596-9|CAB01859.1| 872|Caenorhabditis elegans Hypothetical pr... 31 0.42
Z68215-15|CAN86580.1| 1544|Caenorhabditis elegans Hypothetical p... 29 1.3
Z68215-11|CAH60786.1| 1301|Caenorhabditis elegans Hypothetical p... 29 1.3
Z68215-6|CAB54213.2| 1304|Caenorhabditis elegans Hypothetical pr... 29 1.3
Z68215-5|CAA92456.1| 1586|Caenorhabditis elegans Hypothetical pr... 29 1.3
Z68215-4|CAA92457.1| 1584|Caenorhabditis elegans Hypothetical pr... 29 1.3
U13646-1|AAC24418.2| 2585|Caenorhabditis elegans Hypothetical pr... 28 2.3
Z81586-3|CAB04691.1| 203|Caenorhabditis elegans Hypothetical pr... 27 3.9
U97005-11|AAB52288.1| 891|Caenorhabditis elegans Hypothetical p... 27 5.2
AC024778-2|AAF60566.2| 2325|Caenorhabditis elegans Neuronal igca... 27 6.9
AF016437-1|AAB65884.2| 690|Caenorhabditis elegans Hypothetical ... 26 9.1
>Z79601-6|CAB01887.1| 872|Caenorhabditis elegans Hypothetical
protein K09A9.6 protein.
Length = 872
Score = 30.7 bits (66), Expect = 0.42
Identities = 15/56 (26%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Frame = +2
Query: 47 QLSIYLALSIRQTYILE-I*SRIFWLLDYQLTGVILRSAITSWATISDEYLRDLRD 211
Q+ +++ R Y +E + R +W +D L++ WATI E + L+D
Sbjct: 664 QMGVFMTAQQRSLYNIEGLTGRAWWAMDQTPYSKFLKTVERQWATIRQEGMEVLKD 719
>Z79596-9|CAB01859.1| 872|Caenorhabditis elegans Hypothetical
protein K09A9.6 protein.
Length = 872
Score = 30.7 bits (66), Expect = 0.42
Identities = 15/56 (26%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Frame = +2
Query: 47 QLSIYLALSIRQTYILE-I*SRIFWLLDYQLTGVILRSAITSWATISDEYLRDLRD 211
Q+ +++ R Y +E + R +W +D L++ WATI E + L+D
Sbjct: 664 QMGVFMTAQQRSLYNIEGLTGRAWWAMDQTPYSKFLKTVERQWATIRQEGMEVLKD 719
>Z68215-15|CAN86580.1| 1544|Caenorhabditis elegans Hypothetical
protein C53B4.4e protein.
Length = 1544
Score = 29.1 bits (62), Expect = 1.3
Identities = 22/64 (34%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Frame = +3
Query: 213 PESPFKSTVFSLRVKTVALKVPLNITP--SIDGEVTLKHFIPDTLISNSTVTHNAYCRNI 386
PES ++ + L V A +V TP S PD++ S+ST T N+ NI
Sbjct: 1031 PESTTRTVIRYLNVTVHAKEVKSAGTPTTSATNVPNATPSTPDSIASSSTNTDNSVPTNI 1090
Query: 387 SVDS 398
S DS
Sbjct: 1091 SADS 1094
>Z68215-11|CAH60786.1| 1301|Caenorhabditis elegans Hypothetical
protein C53B4.4d protein.
Length = 1301
Score = 29.1 bits (62), Expect = 1.3
Identities = 22/64 (34%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Frame = +3
Query: 213 PESPFKSTVFSLRVKTVALKVPLNITP--SIDGEVTLKHFIPDTLISNSTVTHNAYCRNI 386
PES ++ + L V A +V TP S PD++ S+ST T N+ NI
Sbjct: 751 PESTTRTVIRYLNVTVHAKEVKSAGTPTTSATNVPNATPSTPDSIASSSTNTDNSVPTNI 810
Query: 387 SVDS 398
S DS
Sbjct: 811 SADS 814
>Z68215-6|CAB54213.2| 1304|Caenorhabditis elegans Hypothetical
protein C53B4.4c protein.
Length = 1304
Score = 29.1 bits (62), Expect = 1.3
Identities = 22/64 (34%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Frame = +3
Query: 213 PESPFKSTVFSLRVKTVALKVPLNITP--SIDGEVTLKHFIPDTLISNSTVTHNAYCRNI 386
PES ++ + L V A +V TP S PD++ S+ST T N+ NI
Sbjct: 751 PESTTRTVIRYLNVTVHAKEVKSAGTPTTSATNVPNATPSTPDSIASSSTNTDNSVPTNI 810
Query: 387 SVDS 398
S DS
Sbjct: 811 SADS 814
>Z68215-5|CAA92456.1| 1586|Caenorhabditis elegans Hypothetical protein
C53B4.4b protein.
Length = 1586
Score = 29.1 bits (62), Expect = 1.3
Identities = 22/64 (34%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Frame = +3
Query: 213 PESPFKSTVFSLRVKTVALKVPLNITP--SIDGEVTLKHFIPDTLISNSTVTHNAYCRNI 386
PES ++ + L V A +V TP S PD++ S+ST T N+ NI
Sbjct: 1033 PESTTRTVIRYLNVTVHAKEVKSAGTPTTSATNVPNATPSTPDSIASSSTNTDNSVPTNI 1092
Query: 387 SVDS 398
S DS
Sbjct: 1093 SADS 1096
>Z68215-4|CAA92457.1| 1584|Caenorhabditis elegans Hypothetical protein
C53B4.4a protein.
Length = 1584
Score = 29.1 bits (62), Expect = 1.3
Identities = 22/64 (34%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Frame = +3
Query: 213 PESPFKSTVFSLRVKTVALKVPLNITP--SIDGEVTLKHFIPDTLISNSTVTHNAYCRNI 386
PES ++ + L V A +V TP S PD++ S+ST T N+ NI
Sbjct: 1031 PESTTRTVIRYLNVTVHAKEVKSAGTPTTSATNVPNATPSTPDSIASSSTNTDNSVPTNI 1090
Query: 387 SVDS 398
S DS
Sbjct: 1091 SADS 1094
>U13646-1|AAC24418.2| 2585|Caenorhabditis elegans Hypothetical protein
ZK783.1 protein.
Length = 2585
Score = 28.3 bits (60), Expect = 2.3
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = -2
Query: 175 CPTGYGRAQDNTCQLIIE*PK-DSTLYFQNVRLANR 71
CPTG+ +A D +CQ I E + +ST N + N+
Sbjct: 1478 CPTGFRKADDGSCQDIDECTEHNSTCCGANAKCVNK 1513
>Z81586-3|CAB04691.1| 203|Caenorhabditis elegans Hypothetical
protein T05F1.4 protein.
Length = 203
Score = 27.5 bits (58), Expect = 3.9
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = -1
Query: 335 IRNKMFQRHFTINRRCDIQWHFQCHSFNS*RKYS*LERRFWSPANHGDI 189
IR+ RH + +RR + H FN+ R+ + R SP+NH +
Sbjct: 33 IRDNQSDRHLSPDRRSNHSEDRHEHRFNNYRQQNRPNSRTPSPSNHNQV 81
>U97005-11|AAB52288.1| 891|Caenorhabditis elegans Hypothetical
protein F19F10.10 protein.
Length = 891
Score = 27.1 bits (57), Expect = 5.2
Identities = 17/58 (29%), Positives = 28/58 (48%)
Frame = -2
Query: 283 FNGTFNATVLTRKENTVDLKGDSGVPQITEIFIGDGCPTGYGRAQDNTCQLIIE*PKD 110
F+ TF+ ++E T + D+GV + E + G P G + + C L E P+D
Sbjct: 577 FSATFDCVQEVKQEATEEEPSDAGVKHLMESLV-SGIPLGI--QEPSECVLEEEKPRD 631
>AC024778-2|AAF60566.2| 2325|Caenorhabditis elegans Neuronal igcam
protein 4 protein.
Length = 2325
Score = 26.6 bits (56), Expect = 6.9
Identities = 13/49 (26%), Positives = 27/49 (55%)
Frame = +3
Query: 213 PESPFKSTVFSLRVKTVALKVPLNITPSIDGEVTLKHFIPDTLISNSTV 359
PE P + ++ S+ A V L+ TP DG ++ ++ + +++S+V
Sbjct: 1054 PELPGRPSMLSIG-DISATTVQLHFTPGFDGHTAIRQWVVEGKMADSSV 1101
>AF016437-1|AAB65884.2| 690|Caenorhabditis elegans Hypothetical
protein F13H6.1 protein.
Length = 690
Score = 26.2 bits (55), Expect = 9.1
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = +3
Query: 198 VICGTPESPFKSTVFSLRVKTVALKVPLNITPSIDGEVTLKHF 326
V+CG + F + FS ++ +TPS D EVT ++F
Sbjct: 106 VVCGECHTSFSLSCFSNFIEHKVSNCGGKLTPSDDCEVTPRNF 148
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,146,300
Number of Sequences: 27780
Number of extensions: 191395
Number of successful extensions: 517
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 516
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 517
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 651753158
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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