Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P28_pT_I21
(719 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U00055-4|AAA50720.2| 431|Caenorhabditis elegans Hypothetical pr... 59 3e-09
Z92789-7|CAB07215.2| 1319|Caenorhabditis elegans Hypothetical pr... 56 3e-08
U10438-1|AAA19083.3| 524|Caenorhabditis elegans Hypothetical pr... 50 2e-06
DQ340624-1|ABC65812.1| 524|Caenorhabditis elegans chondroitin p... 50 2e-06
U39678-12|AAK39209.2| 1185|Caenorhabditis elegans Hypothetical p... 48 5e-06
U42835-2|AAA83586.1| 617|Caenorhabditis elegans Chitinase prote... 38 0.005
Z71265-6|CAA95837.1| 399|Caenorhabditis elegans Hypothetical pr... 37 0.017
Z71258-17|CAA95787.1| 399|Caenorhabditis elegans Hypothetical p... 37 0.017
U30248-1|AAC13874.1| 399|Caenorhabditis elegans transcription f... 37 0.017
U13614-1|AAA21347.1| 399|Caenorhabditis elegans protein ( Caeno... 37 0.017
AL117206-13|CAB60454.2| 1651|Caenorhabditis elegans Hypothetical... 33 0.21
AL110498-8|CAB57911.2| 1651|Caenorhabditis elegans Hypothetical ... 33 0.21
Z32840-2|CAD91625.1| 160|Caenorhabditis elegans Hypothetical pr... 32 0.36
Z81086-3|CAD56586.1| 711|Caenorhabditis elegans Hypothetical pr... 31 0.83
Z81086-2|CAB03121.3| 1045|Caenorhabditis elegans Hypothetical pr... 31 0.83
AF003135-8|AAK18984.1| 235|Caenorhabditis elegans Hypothetical ... 31 1.1
Z32840-1|CAA83679.1| 584|Caenorhabditis elegans Hypothetical pr... 30 1.9
DQ340623-1|ABC65811.1| 584|Caenorhabditis elegans chondroitin p... 30 1.9
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 29 2.5
U00035-3|AAA50645.1| 548|Caenorhabditis elegans Egg sterile (un... 29 2.5
AF016686-15|AAB66231.3| 572|Caenorhabditis elegans C-type lecti... 29 2.5
Z81519-5|CAI46603.1| 590|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z81519-4|CAB04218.1| 592|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z29443-10|CAA82578.2| 315|Caenorhabditis elegans Hypothetical p... 29 3.3
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr... 29 3.3
AB121091-1|BAD14918.1| 315|Caenorhabditis elegans T-box transcr... 29 3.3
U80436-4|AAC71111.1| 552|Caenorhabditis elegans Uncoordinated p... 24 3.9
U97405-1|AAB53007.1| 327|Caenorhabditis elegans Hypothetical pr... 29 4.4
Z93377-3|CAB07580.1| 358|Caenorhabditis elegans Hypothetical pr... 28 5.8
U61952-7|AAB03164.1| 1042|Caenorhabditis elegans Abnormal cell l... 28 5.8
U39850-6|AAM45366.1| 1081|Caenorhabditis elegans Polyq (poly glu... 28 5.8
U39850-3|AAM45367.2| 1647|Caenorhabditis elegans Polyq (poly glu... 28 5.8
AF163018-1|AAD49323.1| 1042|Caenorhabditis elegans bromodomain p... 28 5.8
Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical pr... 28 7.7
Z70271-2|CAA94236.2| 1256|Caenorhabditis elegans Hypothetical pr... 28 7.7
Z30974-5|CAH19087.1| 3183|Caenorhabditis elegans Hypothetical pr... 28 7.7
Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical pr... 28 7.7
Z30423-15|CAH19103.1| 3183|Caenorhabditis elegans Hypothetical p... 28 7.7
Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical p... 28 7.7
U41039-5|AAL11488.1| 357|Caenorhabditis elegans Synapse defecti... 28 7.7
U41039-4|AAL11489.1| 452|Caenorhabditis elegans Synapse defecti... 28 7.7
U41039-3|AAK68627.2| 537|Caenorhabditis elegans Synapse defecti... 28 7.7
U00048-4|AAM15547.1| 751|Caenorhabditis elegans Hypothetical pr... 28 7.7
M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-re... 28 7.7
AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane... 28 7.7
>U00055-4|AAA50720.2| 431|Caenorhabditis elegans Hypothetical
protein R02F2.4 protein.
Length = 431
Score = 59.3 bits (137), Expect = 3e-09
Identities = 56/198 (28%), Positives = 81/198 (40%), Gaps = 2/198 (1%)
Frame = -2
Query: 640 DGQYEDDRQCDKXFECVDGVATTKLCPDGLVFDPTIRKINKCDQPFNV-DCGDRTELQPP 464
DG + F C +G+A + CP LVF+P I+ CD P NV DC +++E
Sbjct: 182 DGNISKSECSNVFFSCSEGIAHRRNCPANLVFNPA---ISSCDWPKNVMDCSEKSE---- 234
Query: 463 KPNSQCPRRNGFFAHPDPSVCNIFYNCIEGEATEVKCTAGLHFDEYSGTCVWPDSAGRQG 284
KP + C +G+F+ S + F C G + C GL F E + C + +
Sbjct: 235 KPQN-CGEVDGYFSFGRCS--SSFSACTNGIPIVMFCPDGLMFSEKNQMCDYEWNVDE-- 289
Query: 283 CNEQQKKTKDGFECPKEQLVDAQGQIVAHPKFPHPNDC-QRFYVCLNGVEPRDLGCQVGE 107
C+ + + ++ E L + DC R C NG E C
Sbjct: 290 CDLESSGFMENYKA-SEALTPCTNM----DNGLYALDCTPRVLSCQNGRE-NIFECPPSL 343
Query: 106 VYNEESQKCDAPENVRGC 53
V+NE S CD PE C
Sbjct: 344 VFNENSLICDYPETSLKC 361
Score = 52.8 bits (121), Expect = 2e-07
Identities = 51/203 (25%), Positives = 83/203 (40%), Gaps = 5/203 (2%)
Frame = -2
Query: 643 KDGQYEDDRQCDKXFECVDGVATTKLCPDGLVFDPTIRKINKCDQPFNVDCGDRTELQPP 464
KDG Y C G C L++DPT +K C +D
Sbjct: 123 KDGVYSSGTCSSSYIICNSGSPRFLSCSTPLIYDPTNKK---CSWKGMID---------- 169
Query: 463 KPNSQCPRRNGFFAHPDPSV----C-NIFYNCIEGEATEVKCTAGLHFDEYSGTCVWPDS 299
+C + +G + D ++ C N+F++C EG A C A L F+ +C WP +
Sbjct: 170 ----ECSQVSGEYCESDGNISKSECSNVFFSCSEGIAHRRNCPANLVFNPAISSCDWPKN 225
Query: 298 AGRQGCNEQQKKTKDGFECPKEQLVDAQGQIVAHPKFPHPNDCQRFYVCLNGVEPRDLGC 119
C+E+ +K ++ C G++ + F F C NG+ P + C
Sbjct: 226 V--MDCSEKSEKPQN---C---------GEVDGY--FSFGRCSSSFSACTNGI-PIVMFC 268
Query: 118 QVGEVYNEESQKCDAPENVRGCE 50
G +++E++Q CD NV C+
Sbjct: 269 PDGLMFSEKNQMCDYEWNVDECD 291
Score = 41.5 bits (93), Expect = 6e-04
Identities = 35/127 (27%), Positives = 51/127 (40%), Gaps = 8/127 (6%)
Frame = -2
Query: 652 CPXKDGQYEDDRQCDKXFECVDGVATTKLCPDGLVFDPTIRKINKCDQPFNVD-C----- 491
C DG + R C +G+ CPDGL+F K CD +NVD C
Sbjct: 239 CGEVDGYFSFGRCSSSFSACTNGIPIVMFCPDGLMFS---EKNQMCDYEWNVDECDLESS 295
Query: 490 GDRTELQPPKPNSQCPRR-NGFFA-HPDPSVCNIFYNCIEGEATEVKCTAGLHFDEYSGT 317
G + + + C NG +A P V +C G +C L F+E S
Sbjct: 296 GFMENYKASEALTPCTNMDNGLYALDCTPRV----LSCQNGRENIFECPPSLVFNENSLI 351
Query: 316 CVWPDSA 296
C +P+++
Sbjct: 352 CDYPETS 358
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/45 (31%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
Frame = -2
Query: 178 NDCQR-FYVCLNGVEPRDLGCQVGEVYNEESQKCDAPENVRGCED 47
++C F+ C G+ R C V+N CD P+NV C +
Sbjct: 188 SECSNVFFSCSEGIAHRR-NCPANLVFNPAISSCDWPKNVMDCSE 231
Score = 30.3 bits (65), Expect = 1.4
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = -2
Query: 166 RFYVCLNGVEPRDLGCQVGEVYNEESQKCDAPENVRGCEDWYKDSEEAAPG 14
RF C++G E R + C VY++ + CD NV C + +++E + G
Sbjct: 41 RFLACVSG-EARYMDCPEDLVYHKNLEFCDWRHNVFECGEEGEENEFSGDG 90
Score = 28.7 bits (61), Expect = 4.4
Identities = 18/56 (32%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Frame = -2
Query: 640 DGQYEDDRQCDKXFECVDGVATTKLCPDGLVFDPTIRKINKCDQPFNV-DCGDRTE 476
DG Y + CV G A CP+ LV+ + + CD NV +CG+ E
Sbjct: 30 DGMYPLGACEPRFLACVSGEARYMDCPEDLVYH---KNLEFCDWRHNVFECGEEGE 82
>Z92789-7|CAB07215.2| 1319|Caenorhabditis elegans Hypothetical protein
H02I12.1 protein.
Length = 1319
Score = 56.0 bits (129), Expect = 3e-08
Identities = 35/133 (26%), Positives = 53/133 (39%), Gaps = 1/133 (0%)
Frame = -2
Query: 643 KDGQYEDDRQCDKXFECVDG-VATTKLCPDGLVFDPTIRKINKCDQPFNVDCGDRTELQP 467
+DG Y ++R C +C G + C L F+ + KCD P V G Q
Sbjct: 1186 EDGLYRNERDCSAILQCFGGELFEHPSCQSSLAFN---QLTGKCDYPQKVS-GCENHGQT 1241
Query: 466 PKPNSQCPRRNGFFAHPDPSVCNIFYNCIEGEATEVKCTAGLHFDEYSGTCVWPDSAGRQ 287
N +C F A D + C +FY C+ G + C +G F+ C WP +
Sbjct: 1242 ---NGECSEHGSFIA--DANNCEVFYRCVWGRKVVMTCPSGTVFNPLLSVCDWPSAV--P 1294
Query: 286 GCNEQQKKTKDGF 248
C+ Q + +
Sbjct: 1295 SCSGQASDSNSSY 1307
Score = 42.3 bits (95), Expect = 3e-04
Identities = 36/128 (28%), Positives = 52/128 (40%), Gaps = 1/128 (0%)
Frame = -2
Query: 403 CNIFYNCIEGEATE-VKCTAGLHFDEYSGTCVWPDSAGRQGCNEQQKKTKDGFECPKEQL 227
C+ C GE E C + L F++ +G C +P GC E +T EC +
Sbjct: 1196 CSAILQCFGGELFEHPSCQSSLAFNQLTGKCDYPQKVS--GC-ENHGQTNG--ECSEH-- 1248
Query: 226 VDAQGQIVAHPKFPHPNDCQRFYVCLNGVEPRDLGCQVGEVYNEESQKCDAPENVRGCED 47
G +A N+C+ FY C+ G + + C G V+N CD P V C
Sbjct: 1249 ----GSFIADA-----NNCEVFYRCVWGRKVV-MTCPSGTVFNPLLSVCDWPSAVPSCSG 1298
Query: 46 WYKDSEEA 23
DS +
Sbjct: 1299 QASDSNSS 1306
Score = 41.9 bits (94), Expect = 4e-04
Identities = 46/198 (23%), Positives = 71/198 (35%), Gaps = 14/198 (7%)
Frame = -2
Query: 598 ECVDGVATTKLCPDGLVFDPTIRKINKCDQPFNVDCGDRT------ELQPPKPNSQCPRR 437
EC D KLC G +FD N+C + CG ++ P P++
Sbjct: 1049 ECTDAGNVEKLCRIGKLFDS---HSNRCVP--RIGCGKEAIRDAIKDMIATTPAPAQPKQ 1103
Query: 436 -NGFFAHPDPS------VCNIFY-NCIEGEATEVKCTAGLHFDEYSGTCVWPDSAGRQGC 281
G AH D VC+ Y C G + +C+ F C+ +S C
Sbjct: 1104 FEGRCAHVDGEAVFSIGVCSSKYLRCSYGASKLQQCSEDRVFSNDKLECIVRESVS--AC 1161
Query: 280 NEQQKKTKDGFECPKEQLVDAQGQIVAHPKFPHPNDCQRFYVCLNGVEPRDLGCQVGEVY 101
+ + + +Q G+ + + DC C G CQ +
Sbjct: 1162 TVPKNPSIKKYYTSNDQSAFCDGK--EDGLYRNERDCSAILQCFGGELFEHPSCQSSLAF 1219
Query: 100 NEESQKCDAPENVRGCED 47
N+ + KCD P+ V GCE+
Sbjct: 1220 NQLTGKCDYPQKVSGCEN 1237
Score = 33.9 bits (74), Expect = 0.12
Identities = 50/216 (23%), Positives = 74/216 (34%), Gaps = 20/216 (9%)
Frame = -2
Query: 664 AQFKCPXKDGQYEDDRQCDKXFE-CVDGVATTKLCPDGLVFDPTIRKINKCDQPFNVDCG 488
A +CP C + + CV+GV C D VF + D+
Sbjct: 27 AATECPAYFNGNIAGNACSREYSICVNGVRQAATCSDDSVFYED--ECVPVDESPECRVD 84
Query: 487 DRTELQP-PKPNSQCP-RRNGFFAHPDPSVCNIFYNCIEGEATEVKCTAGLHFDEYSGTC 314
+ TE P C +++G ++ N F +C+ G A KC L F+E + C
Sbjct: 85 ENTEEDDTPYAEFDCTSKQDGIYSI---GCSNQFISCVAGGAYMAKCPDSLVFNERTQDC 141
Query: 313 VWPDSAGRQGCNEQQKKTKDGFECPKEQLVDAQGQIVAHPKFPHPN----DCQR------ 164
+Q + +DG E E + G P P+ DC
Sbjct: 142 RESCDEVKQDTTTAPQVYEDGEEGYGEASGEIAGDYERQPSNEQPDSIDFDCNGLEDGNY 201
Query: 163 -------FYVCLNGVEPRDLGCQVGEVYNEESQKCD 77
FY C N + + C G V+N Q CD
Sbjct: 202 ADGCNDVFYSCSNNMVFQRY-CPPGTVFNINQQSCD 236
Score = 31.9 bits (69), Expect = 0.47
Identities = 15/50 (30%), Positives = 21/50 (42%)
Frame = -2
Query: 655 KCPXKDGQYEDDRQCDKXFECVDGVATTKLCPDGLVFDPTIRKINKCDQP 506
+C D C+ + CV G CP G VF+P ++ CD P
Sbjct: 1244 ECSEHGSFIADANNCEVFYRCVWGRKVVMTCPSGTVFNPL---LSVCDWP 1290
Score = 28.7 bits (61), Expect = 4.4
Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 3/49 (6%)
Frame = -2
Query: 184 HPNDCQRFY-VCLNGVEPRDLGCQVGEVYNEESQKCDAPENV--RGCED 47
H C FY VC +G CQ+GE Y+ Q C + R C++
Sbjct: 894 HGTGCSSFYFVCSHGRLISSGNCQLGEGYDPSVQGCRTFSEIPARACDE 942
>U10438-1|AAA19083.3| 524|Caenorhabditis elegans Hypothetical
protein B0280.5 protein.
Length = 524
Score = 50.0 bits (114), Expect = 2e-06
Identities = 59/219 (26%), Positives = 81/219 (36%), Gaps = 19/219 (8%)
Frame = -2
Query: 652 CPXKDGQYEDDRQCDKXF-ECVDGVATTKLCPDGLVFDPTIRKINKCDQPFNV-DCGDRT 479
C K + C F C G+A CP LVF+PTI CD P +V +C
Sbjct: 247 CEGKADGIHPNGVCSTNFLTCSGGIARIMDCPASLVFNPTIL---VCDWPRDVAECAGL- 302
Query: 478 ELQPPKPNSQCPRRNGFFAHPDPSVCNIFYNCIEGEATEVKCTAGLHFDEYSGTCVWPDS 299
P P C +G+F+ S + F C G A + C AGL F E + C + +
Sbjct: 303 ----PTPQPTC-EEDGYFSFGQCS--SSFTACTNGRAIVMFCPAGLKFSESTVRCDYESN 355
Query: 298 AGR----QGCNEQQKKTKDGFECPKEQLVDAQGQIVAHPK-FPHPNDCQRFYVCLN--GV 140
G + + E E +A G+ N C L+ G
Sbjct: 356 VSECQETSGEESGEASGEQSGEGSGEASGEASGESSGEGSGVEEQNQCVGLDNGLHAIGC 415
Query: 139 EPRDLGCQVGE----------VYNEESQKCDAPENVRGC 53
PR L CQ G V+N++S CD P+ C
Sbjct: 416 SPRVLSCQNGHVDIFECPSSLVFNDQSLICDYPQTSLKC 454
Score = 32.7 bits (71), Expect = 0.27
Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = -2
Query: 175 DCQ-RFYVCLNGVEPRDLGCQVGEVYNEESQKCDAPENVRGCEDWYKDSEEAA 20
+C+ +F C G+ R + C +YNE CD NV GCE + S E +
Sbjct: 36 ECEPQFLTCSGGIA-RIMDCPADLIYNEPLLICDWRHNVIGCEGSGESSGETS 87
>DQ340624-1|ABC65812.1| 524|Caenorhabditis elegans chondroitin
proteoglycan-2 protein.
Length = 524
Score = 50.0 bits (114), Expect = 2e-06
Identities = 59/219 (26%), Positives = 81/219 (36%), Gaps = 19/219 (8%)
Frame = -2
Query: 652 CPXKDGQYEDDRQCDKXF-ECVDGVATTKLCPDGLVFDPTIRKINKCDQPFNV-DCGDRT 479
C K + C F C G+A CP LVF+PTI CD P +V +C
Sbjct: 247 CEGKADGIHPNGVCSTNFLTCSGGIARIMDCPASLVFNPTIL---VCDWPRDVAECAGL- 302
Query: 478 ELQPPKPNSQCPRRNGFFAHPDPSVCNIFYNCIEGEATEVKCTAGLHFDEYSGTCVWPDS 299
P P C +G+F+ S + F C G A + C AGL F E + C + +
Sbjct: 303 ----PTPQPTC-EEDGYFSFGQCS--SSFTACTNGRAIVMFCPAGLKFSESTVRCDYESN 355
Query: 298 AGR----QGCNEQQKKTKDGFECPKEQLVDAQGQIVAHPK-FPHPNDCQRFYVCLN--GV 140
G + + E E +A G+ N C L+ G
Sbjct: 356 VSECQETSGEESGEASGEQSGEGSGEASGEASGESSGEGSGVEEQNQCVGLDNGLHAIGC 415
Query: 139 EPRDLGCQVGE----------VYNEESQKCDAPENVRGC 53
PR L CQ G V+N++S CD P+ C
Sbjct: 416 SPRVLSCQNGHVDIFECPSSLVFNDQSLICDYPQTSLKC 454
Score = 32.7 bits (71), Expect = 0.27
Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = -2
Query: 175 DCQ-RFYVCLNGVEPRDLGCQVGEVYNEESQKCDAPENVRGCEDWYKDSEEAA 20
+C+ +F C G+ R + C +YNE CD NV GCE + S E +
Sbjct: 36 ECEPQFLTCSGGIA-RIMDCPADLIYNEPLLICDWRHNVIGCEGSGESSGETS 87
>U39678-12|AAK39209.2| 1185|Caenorhabditis elegans Hypothetical
protein C39D10.7 protein.
Length = 1185
Score = 48.4 bits (110), Expect = 5e-06
Identities = 56/232 (24%), Positives = 87/232 (37%), Gaps = 17/232 (7%)
Frame = -2
Query: 652 CPXKDGQYEDDRQCDKXFECVDGVATTKLCPDGLVFDPTIRKINKCDQPFNVDCGDRTEL 473
CP DG Y K +CV+ V + CP+GL FD + + + GDR L
Sbjct: 43 CPDGDGLYAVGCS-SKYLQCVNNVEYEQSCPEGLYFDRLLARCERRSSNHLCATGDRVTL 101
Query: 472 --QPPKPNSQC-PRRNGFFAHPDPSVCN-IFYNCIEGEATEVKCTAGLHFDEYSGTCVWP 305
+ + C R +G +A D +VCN +Y C G + KC + C +
Sbjct: 102 NVRQKAVSINCVGRLSGDYA-LDKTVCNENYYQCANGISYMRKCPYQQVYVPILKRCDYH 160
Query: 304 DSAGRQGCNEQQKKT--------KDGFECPKEQLVDAQG----QIVAHPKFPHPNDCQ-R 164
+ G + Q D + ++ + ++ F C
Sbjct: 161 TNCNASGGVKDQAAAAYASPTYDSDNYIVTTKEFENGHNGLDCKVTGDMHFTDNVKCSPY 220
Query: 163 FYVCLNGVEPRDLGCQVGEVYNEESQKCDAPENVRGCEDWYKDSEEAAPGPK 8
F+ C NG R C +Y + CD PE+V+ C + Y SE + PK
Sbjct: 221 FWQCSNGKLFRKT-CPEKLIYVLDQNLCDFPESVKDCPE-YNGSETSYRAPK 270
Score = 38.3 bits (85), Expect = 0.005
Identities = 17/53 (32%), Positives = 26/53 (49%)
Frame = -2
Query: 175 DCQRFYVCLNGVEPRDLGCQVGEVYNEESQKCDAPENVRGCEDWYKDSEEAAP 17
DC+++ + + C G Y+ KCD ENV GC + YK + +A P
Sbjct: 700 DCEKYLIKCYNRKTFKFPCPSGLYYSRLQDKCDVKENVEGCPE-YKPTTDATP 751
Score = 37.5 bits (83), Expect = 0.010
Identities = 16/53 (30%), Positives = 26/53 (49%)
Frame = -2
Query: 175 DCQRFYVCLNGVEPRDLGCQVGEVYNEESQKCDAPENVRGCEDWYKDSEEAAP 17
DC+ +Y+ N E C G Y++ + +CD E+V C + YK + P
Sbjct: 799 DCEDYYISCNNFETTINRCPAGLFYSKLNNRCDYKEHVEDCPE-YKPTPSTTP 850
Score = 36.3 bits (80), Expect = 0.022
Identities = 46/209 (22%), Positives = 81/209 (38%), Gaps = 3/209 (1%)
Frame = -2
Query: 658 FKCPXK-DGQYEDDRQCDKXFECVDGVATTKLCPDGLVFDPTIRKINKCDQPFNVD-CGD 485
F C + DG Y +C+ G + C GL ++ K C VD C
Sbjct: 887 FSCSGRPDGIYALPYCSQDYVQCMQGRSLISSCAPGLFYN---EKNGMCAYKHTVDTCKI 943
Query: 484 RTELQPPKPNSQCPRRNGFFAHPDPSVCNIFY-NCIEGEATEVKCTAGLHFDEYSGTCVW 308
N+ + +G+++ + C+ +Y +CI+ + ++ C L F + S CV+
Sbjct: 944 GKGSDIIDSNACFGKSDGYYS----AGCSSYYFSCIDEQIRKMSCPNSLKFSKESEKCVF 999
Query: 307 PDSAGRQGCNEQQKKTKDGFECPKEQLVDAQGQIVAHPKFPHPNDCQRFYVCLNGVEPRD 128
P A + C+ + P + + + H K P+ + VC NG
Sbjct: 1000 PIDA--KECSIATTLDRTPPAVPSD-FCTIRSNGLHHLKMCSPH----YIVCDNG-RAFS 1051
Query: 127 LGCQVGEVYNEESQKCDAPENVRGCEDWY 41
C VYN ++Q C+ + C + Y
Sbjct: 1052 GTCIAPLVYNGDTQTCNYKSTNKDCGNDY 1080
Score = 35.5 bits (78), Expect = 0.038
Identities = 17/55 (30%), Positives = 24/55 (43%)
Frame = -2
Query: 400 NIFYNCIEGEATEVKCTAGLHFDEYSGTCVWPDSAGRQGCNEQQKKTKDGFECPK 236
++FY C G+ C A L F+ Y G C + S + C Q T + PK
Sbjct: 589 SVFYICANGQVVATTCPANLIFNPYVGECDY--STNVRDCQGYQPTTTPSYSYPK 641
Score = 31.5 bits (68), Expect = 0.63
Identities = 15/52 (28%), Positives = 24/52 (46%)
Frame = -2
Query: 163 FYVCLNGVEPRDLGCQVGEVYNEESQKCDAPENVRGCEDWYKDSEEAAPGPK 8
FY+C NG + C ++N +CD NVR C+ + + + PK
Sbjct: 591 FYICANG-QVVATTCPANLIFNPYVGECDYSTNVRDCQGYQPTTTPSYSYPK 641
Score = 30.7 bits (66), Expect = 1.1
Identities = 32/127 (25%), Positives = 49/127 (38%), Gaps = 14/127 (11%)
Frame = -2
Query: 652 CPXKDGQYEDDRQCDKXF-ECVDGVATTKLCPDGLVFDPTIRKINKC----------DQP 506
C +DG + ++C F C +GV C D LVFD + D P
Sbjct: 353 CKNRDGIF-GIKECHASFLSCDNGVGRVIQCADNLVFDTRVSACEFAAICLEPRKPEDVP 411
Query: 505 FNVDCGDRTELQPP--KPNSQCP-RRNGFFAHPDPSVCNIFYNCIEGEATEVKCTAGLHF 335
+ G +P K + C + NG + + F+ C +G A C L F
Sbjct: 412 VLYNHGGAYNERPAEVKVDFDCTGKPNGKYI--KEACTKSFFTCHDGRAFANDCPGDLVF 469
Query: 334 DEYSGTC 314
++ +GTC
Sbjct: 470 NKATGTC 476
Score = 30.3 bits (65), Expect = 1.4
Identities = 19/63 (30%), Positives = 26/63 (41%), Gaps = 2/63 (3%)
Frame = -2
Query: 673 IASAQFKCPX-KDGQYEDDRQCDKXFECVDGVATTKLCPDGLVFDPTIRKINKCDQPFNV 497
IA F C DG + + C +G CP L+F+P + +CD NV
Sbjct: 567 IALDDFSCKHLADGNHASGLCKSVFYICANGQVVATTCPANLIFNP---YVGECDYSTNV 623
Query: 496 -DC 491
DC
Sbjct: 624 RDC 626
Score = 28.3 bits (60), Expect = 5.8
Identities = 33/152 (21%), Positives = 53/152 (34%)
Frame = -2
Query: 475 LQPPKPNSQCPRRNGFFAHPDPSVCNIFYNCIEGEATEVKCTAGLHFDEYSGTCVWPDSA 296
L P P CP +G +A + + C+ E C GL+FD C +
Sbjct: 36 LNPKGP--PCPDGDGLYA---VGCSSKYLQCVNNVEYEQSCPEGLYFDRLLARC--ERRS 88
Query: 295 GRQGCNEQQKKTKDGFECPKEQLVDAQGQIVAHPKFPHPNDCQRFYVCLNGVEPRDLGCQ 116
C + T + + K ++ G++ + +Y C NG+ C
Sbjct: 89 SNHLCATGDRVTLNVRQ--KAVSINCVGRLSGDYALDKTVCNENYYQCANGISYM-RKCP 145
Query: 115 VGEVYNEESQKCDAPENVRGCEDWYKDSEEAA 20
+VY ++CD N KD AA
Sbjct: 146 YQQVYVPILKRCDYHTNC-NASGGVKDQAAAA 176
Score = 28.3 bits (60), Expect = 5.8
Identities = 16/46 (34%), Positives = 20/46 (43%), Gaps = 1/46 (2%)
Frame = -2
Query: 676 AIASAQFKCPXK-DGQYEDDRQCDKXFECVDGVATTKLCPDGLVFD 542
A F C K +G+Y + F C DG A CP LVF+
Sbjct: 425 AEVKVDFDCTGKPNGKYIKEACTKSFFTCHDGRAFANDCPGDLVFN 470
>U42835-2|AAA83586.1| 617|Caenorhabditis elegans Chitinase protein
1 protein.
Length = 617
Score = 38.3 bits (85), Expect = 0.005
Identities = 27/134 (20%), Positives = 57/134 (42%), Gaps = 9/134 (6%)
Frame = -2
Query: 442 RRNGFFAHPDPSVCNIFYNCIEGEATEVKCTAGLHFDEYSGTCVWPDSAGRQGCNEQQKK 263
+ +GF+ P+ + C +F C+ ++ + C +GL +YS + + ++ GC+ +
Sbjct: 484 KSDGFY--PNSNNCGLFVLCLSSKSYSMSCPSGL---QYSASLKYCTTSTASGCSVTTTR 538
Query: 262 TKDGF-ECPKEQLVDAQGQIVAHPKFPH--------PNDCQRFYVCLNGVEPRDLGCQVG 110
+ + P F P+DC +F C+NG+ + C G
Sbjct: 539 APTTTTKSAPTVTTTTRAPTTTTPAFKCTKDGFFGVPSDCLKFIRCVNGIS-YNFECPNG 597
Query: 109 EVYNEESQKCDAPE 68
++ ++ CD P+
Sbjct: 598 LSFHADTMMCDRPD 611
Score = 35.5 bits (78), Expect = 0.038
Identities = 21/66 (31%), Positives = 28/66 (42%)
Frame = -2
Query: 688 TAVAAIASAQFKCPXKDGQYEDDRQCDKXFECVDGVATTKLCPDGLVFDPTIRKINKCDQ 509
T + FKC KDG + C K CV+G++ CP+GL F CD+
Sbjct: 554 TRAPTTTTPAFKCT-KDGFFGVPSDCLKFIRCVNGISYNFECPNGLSFHADTM---MCDR 609
Query: 508 PFNVDC 491
P C
Sbjct: 610 PDPSKC 615
Score = 33.9 bits (74), Expect = 0.12
Identities = 35/147 (23%), Positives = 49/147 (33%), Gaps = 19/147 (12%)
Frame = -2
Query: 685 AVAAIASAQFKCPXK-DGQYEDDRQCDKXFECVDGVATTKLCPDGLVFDPTIRKINKCDQ 509
A AS C K DG Y + C C+ + + CP GL + +++ C
Sbjct: 470 ATTTTASNTNVCSGKSDGFYPNSNNCGLFVLCLSSKSYSMSCPSGLQYSASLKY---CTT 526
Query: 508 PFNVDCGDRTELQPPKPNSQCPR------------------RNGFFAHPDPSVCNIFYNC 383
C T P P ++GFF P S C F C
Sbjct: 527 STASGCSVTTTRAPTTTTKSAPTVTTTTRAPTTTTPAFKCTKDGFFGVP--SDCLKFIRC 584
Query: 382 IEGEATEVKCTAGLHFDEYSGTCVWPD 302
+ G + +C GL F + C PD
Sbjct: 585 VNGISYNFECPNGLSFHADTMMCDRPD 611
>Z71265-6|CAA95837.1| 399|Caenorhabditis elegans Hypothetical
protein M05B5.5a protein.
Length = 399
Score = 36.7 bits (81), Expect = 0.017
Identities = 23/84 (27%), Positives = 35/84 (41%)
Frame = -3
Query: 480 LNSSPPSPTHNVPAAMDSLPIPTPLCATSSTTAXXXXXXXXXXXPAFTSTSTPVPASGPI 301
LN PP T ++ + LP P +S A A +STST P++ P
Sbjct: 52 LNPYPPMQTTDIDYSSAFLPTHPPTETPASVAAPTSATSDIKPIHATSSTSTTAPSTAPA 111
Query: 300 PPEDKDVTNNKKKQRTASSAPKSS 229
P DV K A+++ ++S
Sbjct: 112 PTSTTDVLELKPTTAPATNSAETS 135
>Z71258-17|CAA95787.1| 399|Caenorhabditis elegans Hypothetical
protein M05B5.5a protein.
Length = 399
Score = 36.7 bits (81), Expect = 0.017
Identities = 23/84 (27%), Positives = 35/84 (41%)
Frame = -3
Query: 480 LNSSPPSPTHNVPAAMDSLPIPTPLCATSSTTAXXXXXXXXXXXPAFTSTSTPVPASGPI 301
LN PP T ++ + LP P +S A A +STST P++ P
Sbjct: 52 LNPYPPMQTTDIDYSSAFLPTHPPTETPASVAAPTSATSDIKPIHATSSTSTTAPSTAPA 111
Query: 300 PPEDKDVTNNKKKQRTASSAPKSS 229
P DV K A+++ ++S
Sbjct: 112 PTSTTDVLELKPTTAPATNSAETS 135
>U30248-1|AAC13874.1| 399|Caenorhabditis elegans transcription
factor E12/47 homolog protein.
Length = 399
Score = 36.7 bits (81), Expect = 0.017
Identities = 23/84 (27%), Positives = 35/84 (41%)
Frame = -3
Query: 480 LNSSPPSPTHNVPAAMDSLPIPTPLCATSSTTAXXXXXXXXXXXPAFTSTSTPVPASGPI 301
LN PP T ++ + LP P +S A A +STST P++ P
Sbjct: 52 LNPYPPMQTTDIDYSSAFLPTHPPTETPASVAAPTSATSDIKPIHATSSTSTTAPSTAPA 111
Query: 300 PPEDKDVTNNKKKQRTASSAPKSS 229
P DV K A+++ ++S
Sbjct: 112 PTSTTDVLELKPTTAPATNSAETS 135
>U13614-1|AAA21347.1| 399|Caenorhabditis elegans protein (
Caenorhabditis elegansN2 basic-helix-loop-helix
transcription factor E12/47homolog mRNA, complete cds.
).
Length = 399
Score = 36.7 bits (81), Expect = 0.017
Identities = 23/84 (27%), Positives = 35/84 (41%)
Frame = -3
Query: 480 LNSSPPSPTHNVPAAMDSLPIPTPLCATSSTTAXXXXXXXXXXXPAFTSTSTPVPASGPI 301
LN PP T ++ + LP P +S A A +STST P++ P
Sbjct: 52 LNPYPPMQTTDIDYSSAFLPTHPPTETPASVAAPTSATSDIKPIHATSSTSTTAPSTAPA 111
Query: 300 PPEDKDVTNNKKKQRTASSAPKSS 229
P DV K A+++ ++S
Sbjct: 112 PTSTTDVLELKPTTAPATNSAETS 135
>AL117206-13|CAB60454.2| 1651|Caenorhabditis elegans Hypothetical
protein Y64G10A.7 protein.
Length = 1651
Score = 33.1 bits (72), Expect = 0.21
Identities = 34/137 (24%), Positives = 56/137 (40%), Gaps = 9/137 (6%)
Frame = -2
Query: 616 QCDKXF---ECVDGV---ATTKLCPDGLVFDPTIRKINKCDQPFNVDCGDRTELQPPKPN 455
+CD F C DG+ + K CP F R KC + + C + T
Sbjct: 685 RCDPVFGYCTCPDGLYGQSCEKPCPH-FTFGKNCRFPCKCARENSEGCDEIT-------- 735
Query: 454 SQCPRRNGFFAHPDPSVCNI-FYNCIEGEATEVKCTAGLHFDEYSGTCVWPDSAGRQG-- 284
+C + G++ H +C+ + G A + C AG+ D +G C AG QG
Sbjct: 736 GKCRCKPGYYGHHCKRMCSPGLFGA--GCAMKCSCPAGIRCDPVTGDCTKKCPAGYQGNL 793
Query: 283 CNEQQKKTKDGFECPKE 233
C++ G++C ++
Sbjct: 794 CDQPCPAGYFGYDCEQK 810
Score = 28.3 bits (60), Expect = 5.8
Identities = 35/133 (26%), Positives = 51/133 (38%), Gaps = 6/133 (4%)
Frame = -2
Query: 616 QCDKXFECVDGVATTKLCPDGLVFDPTIRKINKCDQPFNVDCGDRTELQPPKPNSQCPRR 437
QC K + G + T+LCPDG + C Q DCG+ NS C
Sbjct: 1273 QCPKGYA---GHSCTELCPDGTFGE-------SCSQ--KCDCGE---------NSMCDAI 1311
Query: 436 NG-FFAHPDPSVCNIFYNCIEG----EATEV-KCTAGLHFDEYSGTCVWPDSAGRQGCNE 275
+G F P S + C++G + ++ C G D +G+CV P C
Sbjct: 1312 SGKCFCKPGHSGSDCKSGCVQGRFGPDCNQLCSCENGGVCDSSTGSCVCPPGYIGTKCEI 1371
Query: 274 QQKKTKDGFECPK 236
+ + G C K
Sbjct: 1372 ACQSDRFGPTCEK 1384
>AL110498-8|CAB57911.2| 1651|Caenorhabditis elegans Hypothetical
protein Y64G10A.7 protein.
Length = 1651
Score = 33.1 bits (72), Expect = 0.21
Identities = 34/137 (24%), Positives = 56/137 (40%), Gaps = 9/137 (6%)
Frame = -2
Query: 616 QCDKXF---ECVDGV---ATTKLCPDGLVFDPTIRKINKCDQPFNVDCGDRTELQPPKPN 455
+CD F C DG+ + K CP F R KC + + C + T
Sbjct: 685 RCDPVFGYCTCPDGLYGQSCEKPCPH-FTFGKNCRFPCKCARENSEGCDEIT-------- 735
Query: 454 SQCPRRNGFFAHPDPSVCNI-FYNCIEGEATEVKCTAGLHFDEYSGTCVWPDSAGRQG-- 284
+C + G++ H +C+ + G A + C AG+ D +G C AG QG
Sbjct: 736 GKCRCKPGYYGHHCKRMCSPGLFGA--GCAMKCSCPAGIRCDPVTGDCTKKCPAGYQGNL 793
Query: 283 CNEQQKKTKDGFECPKE 233
C++ G++C ++
Sbjct: 794 CDQPCPAGYFGYDCEQK 810
Score = 28.3 bits (60), Expect = 5.8
Identities = 35/133 (26%), Positives = 51/133 (38%), Gaps = 6/133 (4%)
Frame = -2
Query: 616 QCDKXFECVDGVATTKLCPDGLVFDPTIRKINKCDQPFNVDCGDRTELQPPKPNSQCPRR 437
QC K + G + T+LCPDG + C Q DCG+ NS C
Sbjct: 1273 QCPKGYA---GHSCTELCPDGTFGE-------SCSQ--KCDCGE---------NSMCDAI 1311
Query: 436 NG-FFAHPDPSVCNIFYNCIEG----EATEV-KCTAGLHFDEYSGTCVWPDSAGRQGCNE 275
+G F P S + C++G + ++ C G D +G+CV P C
Sbjct: 1312 SGKCFCKPGHSGSDCKSGCVQGRFGPDCNQLCSCENGGVCDSSTGSCVCPPGYIGTKCEI 1371
Query: 274 QQKKTKDGFECPK 236
+ + G C K
Sbjct: 1372 ACQSDRFGPTCEK 1384
>Z32840-2|CAD91625.1| 160|Caenorhabditis elegans Hypothetical
protein C07G2.1b protein.
Length = 160
Score = 32.3 bits (70), Expect = 0.36
Identities = 21/82 (25%), Positives = 34/82 (41%), Gaps = 1/82 (1%)
Frame = -2
Query: 643 KDGQYEDDRQCDKXFECVDGVATTKLCPDGLVFDPTIRKINKCDQPFNV-DCGDRTELQP 467
+DG Y + C G++ CP L++DP +I C+ +NV CG +
Sbjct: 65 EDGLYAIGGCSPQFLTCSGGISRIMDCPADLIYDP---RIVACEYSYNVPQCGGVPQDVT 121
Query: 466 PKPNSQCPRRNGFFAHPDPSVC 401
+ NG F P+ + C
Sbjct: 122 STQEAIFICENGLFFSPEQARC 143
>Z81086-3|CAD56586.1| 711|Caenorhabditis elegans Hypothetical
protein F53B6.2b protein.
Length = 711
Score = 31.1 bits (67), Expect = 0.83
Identities = 18/66 (27%), Positives = 35/66 (53%), Gaps = 3/66 (4%)
Frame = -2
Query: 247 ECPKEQLVDAQGQIVAHPKFPHPNDCQRFYVCLNGVEPRDLGCQV---GEVYNEESQKCD 77
E +EQL ++VA H ++C++ + G + R + C+V GE+ N ++ C+
Sbjct: 461 EKAREQLRKYGNELVARWDIGHWSECRQKTCHVAGYQARGISCKVTFHGEIRNVDNSICE 520
Query: 76 APENVR 59
+ +VR
Sbjct: 521 SLASVR 526
>Z81086-2|CAB03121.3| 1045|Caenorhabditis elegans Hypothetical
protein F53B6.2a protein.
Length = 1045
Score = 31.1 bits (67), Expect = 0.83
Identities = 18/66 (27%), Positives = 35/66 (53%), Gaps = 3/66 (4%)
Frame = -2
Query: 247 ECPKEQLVDAQGQIVAHPKFPHPNDCQRFYVCLNGVEPRDLGCQV---GEVYNEESQKCD 77
E +EQL ++VA H ++C++ + G + R + C+V GE+ N ++ C+
Sbjct: 795 EKAREQLRKYGNELVARWDIGHWSECRQKTCHVAGYQARGISCKVTFHGEIRNVDNSICE 854
Query: 76 APENVR 59
+ +VR
Sbjct: 855 SLASVR 860
>AF003135-8|AAK18984.1| 235|Caenorhabditis elegans Hypothetical
protein W03F11.1 protein.
Length = 235
Score = 30.7 bits (66), Expect = 1.1
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = -2
Query: 418 PDPSVCNIFYNCIEGEATEVKCTAGLHFDEYSGTC 314
PD C FY C G T+ C G +D++ TC
Sbjct: 167 PDVYNCKNFYQCASGLWTQRSCGEGTIWDQHKLTC 201
>Z32840-1|CAA83679.1| 584|Caenorhabditis elegans Hypothetical
protein C07G2.1a protein.
Length = 584
Score = 29.9 bits (64), Expect = 1.9
Identities = 20/70 (28%), Positives = 31/70 (44%), Gaps = 5/70 (7%)
Frame = -2
Query: 643 KDGQYEDDRQCDKXFECVDGVATTKLCPDGLVFDPTIRKINKCDQPFNV-DCG----DRT 479
+DG Y + C G++ CP L++DP +I C+ +NV CG D T
Sbjct: 65 EDGLYAIGGCSPQFLTCSGGISRIMDCPADLIYDP---RIVACEYSYNVPQCGGVPQDVT 121
Query: 478 ELQPPKPNSQ 449
Q P+ +
Sbjct: 122 STQEAYPSEE 131
>DQ340623-1|ABC65811.1| 584|Caenorhabditis elegans chondroitin
proteoglycan-1 protein.
Length = 584
Score = 29.9 bits (64), Expect = 1.9
Identities = 20/70 (28%), Positives = 31/70 (44%), Gaps = 5/70 (7%)
Frame = -2
Query: 643 KDGQYEDDRQCDKXFECVDGVATTKLCPDGLVFDPTIRKINKCDQPFNV-DCG----DRT 479
+DG Y + C G++ CP L++DP +I C+ +NV CG D T
Sbjct: 65 EDGLYAIGGCSPQFLTCSGGISRIMDCPADLIYDP---RIVACEYSYNVPQCGGVPQDVT 121
Query: 478 ELQPPKPNSQ 449
Q P+ +
Sbjct: 122 STQEAYPSEE 131
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 29.5 bits (63), Expect = 2.5
Identities = 30/134 (22%), Positives = 46/134 (34%), Gaps = 4/134 (2%)
Frame = -3
Query: 684 QSLQLQAPNSSAPXKTASMKTTDNA----TSXSNVSMESPQPSSARTVLCSTLLSGRXXX 517
Q+ Q Q ++ AP T + + ++ TS +N +P S+ S S
Sbjct: 571 QAAQAQQASTPAPSTTPAPQAASSSQAAPTSGANTQPATPSASNQPPTPASASASTTLHV 630
Query: 516 XXXXXXXXXAIGLNSSPPSPTHNVPAAMDSLPIPTPLCATSSTTAXXXXXXXXXXXPAFT 337
G S PS A DS IP+ A + T + T
Sbjct: 631 EPASVAGGSQAG--SRAPSAGPGPSATPDSSTIPSASAAADAQTTTSSETSTPGEPTSST 688
Query: 336 STSTPVPASGPIPP 295
+ TP P++ PP
Sbjct: 689 PSDTPAPSTSVPPP 702
>U00035-3|AAA50645.1| 548|Caenorhabditis elegans Egg sterile
(unfertilizable) protein2 protein.
Length = 548
Score = 29.5 bits (63), Expect = 2.5
Identities = 24/98 (24%), Positives = 36/98 (36%)
Frame = -2
Query: 670 ASAQFKCPXKDGQYEDDRQCDKXFECVDGVATTKLCPDGLVFDPTIRKINKCDQPFNVDC 491
+S QF C K E R+CD ++C D + K C KC PF+ C
Sbjct: 421 SSIQFTCDNKC--LESSRRCDGVWDCEDK-SDEKGCDKCPSRSFKCSADKKC-LPFHTRC 476
Query: 490 GDRTELQPPKPNSQCPRRNGFFAHPDPSVCNIFYNCIE 377
E +C + H D +C+ C++
Sbjct: 477 NGVAECSDGSDEHKCSCQECLGTHHDTYMCSESNRCLK 514
Score = 27.9 bits (59), Expect = 7.7
Identities = 37/133 (27%), Positives = 52/133 (39%), Gaps = 22/133 (16%)
Frame = -2
Query: 658 FKCPXKDGQYED----DRQCDKXFECVDGVATTKLCP-DGLVFDPTIRKI--NKCDQPFN 500
F CP G + + CD F+C DG K P V + +I+ NKC +
Sbjct: 377 FTCPAVGGIHNKCIKRSKVCDGIFDCEDGADEKKCTPVKECVVESSIQFTCDNKCLESSR 436
Query: 499 -----VDCGDRTELQPPKPNSQCPRRNGFFAHPDPSV------CNIFYNCIEGEATEVKC 353
DC D+++ K +CP R+ F D CN C +G + E KC
Sbjct: 437 RCDGVWDCEDKSD---EKGCDKCPSRS-FKCSADKKCLPFHTRCNGVAECSDG-SDEHKC 491
Query: 352 TA----GLHFDEY 326
+ G H D Y
Sbjct: 492 SCQECLGTHHDTY 504
>AF016686-15|AAB66231.3| 572|Caenorhabditis elegans C-type lectin
protein 43 protein.
Length = 572
Score = 29.5 bits (63), Expect = 2.5
Identities = 14/44 (31%), Positives = 21/44 (47%), Gaps = 2/44 (4%)
Frame = -2
Query: 517 CDQPFNVDC--GDRTELQPPKPNSQCPRRNGFFAHPDPSVCNIF 392
C+ PF+V G T P PN P GF+++ D + +F
Sbjct: 161 CEVPFHVTSTSGTPTRAPTPTPNGSVPCPEGFWSYKDNTCLKLF 204
>Z81519-5|CAI46603.1| 590|Caenorhabditis elegans Hypothetical
protein F29C12.1b protein.
Length = 590
Score = 29.1 bits (62), Expect = 3.3
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = -2
Query: 499 VDCGDRTELQPPKPNSQCPRRNGF 428
+D G T L PP P +QCPR+ G+
Sbjct: 448 IDAGKGTPLAPP-PQAQCPRQPGW 470
>Z81519-4|CAB04218.1| 592|Caenorhabditis elegans Hypothetical
protein F29C12.1a protein.
Length = 592
Score = 29.1 bits (62), Expect = 3.3
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = -2
Query: 499 VDCGDRTELQPPKPNSQCPRRNGF 428
+D G T L PP P +QCPR+ G+
Sbjct: 450 IDAGKGTPLAPP-PQAQCPRQPGW 472
>Z29443-10|CAA82578.2| 315|Caenorhabditis elegans Hypothetical
protein T07C4.2 protein.
Length = 315
Score = 29.1 bits (62), Expect = 3.3
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = -3
Query: 657 SSAPXKTASMKTTDNATSXSNVSMESPQPSSARTVLCSTLLSGR 526
S + K S D+ T S+ + SPQP +RTV S L R
Sbjct: 197 SQSDRKRNSPSADDSTTDESSSQVSSPQPKKSRTVSVSPPLMPR 240
>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical protein
K06A9.1b protein.
Length = 2232
Score = 29.1 bits (62), Expect = 3.3
Identities = 23/92 (25%), Positives = 40/92 (43%)
Frame = -3
Query: 657 SSAPXKTASMKTTDNATSXSNVSMESPQPSSARTVLCSTLLSGRXXXXXXXXXXXXAIGL 478
S+ P T +M +T + T S +S ES +S + ST+ G +
Sbjct: 1918 STVPSSTGTMGSTSSGTVGSTIS-ESSTAASTSSQTGSTVTIGSTSGTNPSSPRS--LSQ 1974
Query: 477 NSSPPSPTHNVPAAMDSLPIPTPLCATSSTTA 382
+ PSP+ + + SLP +P +T S ++
Sbjct: 1975 ITITPSPSQSTESTQTSLPSSSPSPSTHSVSS 2006
>AB121091-1|BAD14918.1| 315|Caenorhabditis elegans T-box
transcription factor TBX-8 protein.
Length = 315
Score = 29.1 bits (62), Expect = 3.3
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = -3
Query: 657 SSAPXKTASMKTTDNATSXSNVSMESPQPSSARTVLCSTLLSGR 526
S + K S D+ T S+ + SPQP +RTV S L R
Sbjct: 197 SQSDRKRNSPSADDSTTDESSSQVSSPQPKKSRTVSVSPPLMPR 240
>U80436-4|AAC71111.1| 552|Caenorhabditis elegans Uncoordinated
protein 73, isoform d protein.
Length = 552
Score = 24.2 bits (50), Expect(2) = 3.9
Identities = 13/43 (30%), Positives = 28/43 (65%)
Frame = -3
Query: 669 QAPNSSAPXKTASMKTTDNATSXSNVSMESPQPSSARTVLCST 541
Q+ ++S+P TA+ TT+++TS + S +P+S+ ++ S+
Sbjct: 43 QSTSTSSPV-TANGHTTESSTSAPIGVLSSGEPTSSNSIPSSS 84
Score = 23.0 bits (47), Expect(2) = 3.9
Identities = 11/23 (47%), Positives = 15/23 (65%), Gaps = 2/23 (8%)
Frame = -3
Query: 477 NSSPPS--PTHNVPAAMDSLPIP 415
NS P S PTH VP+++ + IP
Sbjct: 78 NSIPSSSTPTHTVPSSVPATVIP 100
>U97405-1|AAB53007.1| 327|Caenorhabditis elegans Hypothetical
protein T09B4.5a protein.
Length = 327
Score = 28.7 bits (61), Expect = 4.4
Identities = 23/101 (22%), Positives = 39/101 (38%), Gaps = 8/101 (7%)
Frame = -3
Query: 288 KDVTNNKKKQRTASSAPKSSWLMPKDRXXXXXXXXXXXTANVSTYA*TVSSPVTSAAKSE 109
+ + + + RTAS PK+ P N S + + S +++ K
Sbjct: 59 RSASKSATRGRTASKTPKTPSKTPSSASARSRSRSRGRPTNASRLSASTPSASSTSVKRS 118
Query: 108 RFITKRARNAMRLRTFAD--------ARTGTRTLRKPHQDP 10
R +TK R+ ++ AD +R R +R QDP
Sbjct: 119 RSVTKTPRDVVKTIEVADDEDEVTTPSRLRQRNVRNLTQDP 159
>Z93377-3|CAB07580.1| 358|Caenorhabditis elegans Hypothetical
protein F13A7.7 protein.
Length = 358
Score = 28.3 bits (60), Expect = 5.8
Identities = 13/42 (30%), Positives = 20/42 (47%)
Frame = -2
Query: 484 RTELQPPKPNSQCPRRNGFFAHPDPSVCNIFYNCIEGEATEV 359
+ ++ PKPN G+F H SV + F+ GE +V
Sbjct: 311 KRDMTSPKPNDDDGTLMGYFRHGYQSVADFFHRKTVGEEEQV 352
>U61952-7|AAB03164.1| 1042|Caenorhabditis elegans Abnormal cell
lineage protein 49 protein.
Length = 1042
Score = 28.3 bits (60), Expect = 5.8
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = -3
Query: 339 TSTSTPVPASGPIPPEDKDVTNNKKKQRTASSAPKSSWL 223
+++ T AS P+ ++ N K S+PKSSWL
Sbjct: 718 STSGTNAVASVPLLSSSRESKNKSKSSDADVSSPKSSWL 756
>U39850-6|AAM45366.1| 1081|Caenorhabditis elegans Polyq (poly
glutamine tract) toxicityenhancer protein 1, isoform a
protein.
Length = 1081
Score = 28.3 bits (60), Expect = 5.8
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = -3
Query: 324 PVPASGPIPPEDKDVTNNKKKQ 259
PVP P+ P +TNNKKK+
Sbjct: 605 PVPPQVPVTPTKPVITNNKKKR 626
>U39850-3|AAM45367.2| 1647|Caenorhabditis elegans Polyq (poly
glutamine tract) toxicityenhancer protein 1, isoform b
protein.
Length = 1647
Score = 28.3 bits (60), Expect = 5.8
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = -3
Query: 324 PVPASGPIPPEDKDVTNNKKKQ 259
PVP P+ P +TNNKKK+
Sbjct: 605 PVPPQVPVTPTKPVITNNKKKR 626
>AF163018-1|AAD49323.1| 1042|Caenorhabditis elegans bromodomain
protein LIN-49 protein.
Length = 1042
Score = 28.3 bits (60), Expect = 5.8
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = -3
Query: 339 TSTSTPVPASGPIPPEDKDVTNNKKKQRTASSAPKSSWL 223
+++ T AS P+ ++ N K S+PKSSWL
Sbjct: 718 STSGTNAVASVPLLSSSRESKNKSKSSDADVSSPKSSWL 756
>Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical protein
F29D11.1 protein.
Length = 4753
Score = 27.9 bits (59), Expect = 7.7
Identities = 13/37 (35%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = -2
Query: 670 ASAQFKCPXKDGQYEDDRQ-CDKXFECVDGVATTKLC 563
++ QF+C G+ DD + CD+ F+C D + LC
Sbjct: 3188 SNGQFQCT--SGECIDDAKVCDRNFDCTDRSDESSLC 3222
>Z70271-2|CAA94236.2| 1256|Caenorhabditis elegans Hypothetical
protein W08D2.5 protein.
Length = 1256
Score = 27.9 bits (59), Expect = 7.7
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = +2
Query: 14 SWCGFLRVLVPVLASANVLRRIAFLALFVINLS 112
S CGF+ ++ ++ N LRRI +L +I ++
Sbjct: 388 SGCGFIYTIIVMIMRGNTLRRIIVRSLDIITIT 420
>Z30974-5|CAH19087.1| 3183|Caenorhabditis elegans Hypothetical protein
K08E5.3b protein.
Length = 3183
Score = 27.9 bits (59), Expect = 7.7
Identities = 18/64 (28%), Positives = 27/64 (42%), Gaps = 1/64 (1%)
Frame = -2
Query: 517 CDQPFNVDCGDRTELQPPKPNSQCPRRNGFFAHPDPSVCNIFYNCIEGE-ATEVKCTAGL 341
C P N D++ P KP C A+P + C+ F +C + E +C G
Sbjct: 2061 CQCPINAK--DQSP-DPRKPGRICSLSVNECANPSLNSCSAFADCFDEENGYRCRCRNGY 2117
Query: 340 HFDE 329
H D+
Sbjct: 2118 HDDD 2121
>Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical protein
K08E5.3a protein.
Length = 3767
Score = 27.9 bits (59), Expect = 7.7
Identities = 18/64 (28%), Positives = 27/64 (42%), Gaps = 1/64 (1%)
Frame = -2
Query: 517 CDQPFNVDCGDRTELQPPKPNSQCPRRNGFFAHPDPSVCNIFYNCIEGE-ATEVKCTAGL 341
C P N D++ P KP C A+P + C+ F +C + E +C G
Sbjct: 2645 CQCPINAK--DQSP-DPRKPGRICSLSVNECANPSLNSCSAFADCFDEENGYRCRCRNGY 2701
Query: 340 HFDE 329
H D+
Sbjct: 2702 HDDD 2705
>Z30423-15|CAH19103.1| 3183|Caenorhabditis elegans Hypothetical
protein K08E5.3b protein.
Length = 3183
Score = 27.9 bits (59), Expect = 7.7
Identities = 18/64 (28%), Positives = 27/64 (42%), Gaps = 1/64 (1%)
Frame = -2
Query: 517 CDQPFNVDCGDRTELQPPKPNSQCPRRNGFFAHPDPSVCNIFYNCIEGE-ATEVKCTAGL 341
C P N D++ P KP C A+P + C+ F +C + E +C G
Sbjct: 2061 CQCPINAK--DQSP-DPRKPGRICSLSVNECANPSLNSCSAFADCFDEENGYRCRCRNGY 2117
Query: 340 HFDE 329
H D+
Sbjct: 2118 HDDD 2121
>Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical
protein K08E5.3a protein.
Length = 3767
Score = 27.9 bits (59), Expect = 7.7
Identities = 18/64 (28%), Positives = 27/64 (42%), Gaps = 1/64 (1%)
Frame = -2
Query: 517 CDQPFNVDCGDRTELQPPKPNSQCPRRNGFFAHPDPSVCNIFYNCIEGE-ATEVKCTAGL 341
C P N D++ P KP C A+P + C+ F +C + E +C G
Sbjct: 2645 CQCPINAK--DQSP-DPRKPGRICSLSVNECANPSLNSCSAFADCFDEENGYRCRCRNGY 2701
Query: 340 HFDE 329
H D+
Sbjct: 2702 HDDD 2705
>U41039-5|AAL11488.1| 357|Caenorhabditis elegans Synapse defective
protein 9, isoforma protein.
Length = 357
Score = 27.9 bits (59), Expect = 7.7
Identities = 13/42 (30%), Positives = 19/42 (45%)
Frame = -3
Query: 336 STSTPVPASGPIPPEDKDVTNNKKKQRTASSAPKSSWLMPKD 211
+T T P S P P + K++ S P+ L+PKD
Sbjct: 120 ATHTVTPRSRPTPKDIKEILETIAPSVGVSETPEEMCLLPKD 161
>U41039-4|AAL11489.1| 452|Caenorhabditis elegans Synapse defective
protein 9, isoformd protein.
Length = 452
Score = 27.9 bits (59), Expect = 7.7
Identities = 13/42 (30%), Positives = 19/42 (45%)
Frame = -3
Query: 336 STSTPVPASGPIPPEDKDVTNNKKKQRTASSAPKSSWLMPKD 211
+T T P S P P + K++ S P+ L+PKD
Sbjct: 215 ATHTVTPRSRPTPKDIKEILETIAPSVGVSETPEEMCLLPKD 256
>U41039-3|AAK68627.2| 537|Caenorhabditis elegans Synapse defective
protein 9, isoformc protein.
Length = 537
Score = 27.9 bits (59), Expect = 7.7
Identities = 13/42 (30%), Positives = 19/42 (45%)
Frame = -3
Query: 336 STSTPVPASGPIPPEDKDVTNNKKKQRTASSAPKSSWLMPKD 211
+T T P S P P + K++ S P+ L+PKD
Sbjct: 198 ATHTVTPRSRPTPKDIKEILETIAPSVGVSETPEEMCLLPKD 239
>U00048-4|AAM15547.1| 751|Caenorhabditis elegans Hypothetical
protein C05D11.7b protein.
Length = 751
Score = 27.9 bits (59), Expect = 7.7
Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 3/55 (5%)
Frame = -2
Query: 592 VDGVATTKLCPDGLVFDPTIRKINKCDQP---FNVDCGDRTELQPPKPNSQCPRR 437
+ G+ T + PD +PT K + C P F+ T QPP+P PRR
Sbjct: 622 LSGIDTKRKVPD----EPTTSKRDACCSPVREFDDQQHQFTSSQPPQPAESSPRR 672
>M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-related
protein protein.
Length = 4753
Score = 27.9 bits (59), Expect = 7.7
Identities = 13/37 (35%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = -2
Query: 670 ASAQFKCPXKDGQYEDDRQ-CDKXFECVDGVATTKLC 563
++ QF+C G+ DD + CD+ F+C D + LC
Sbjct: 3188 SNGQFQCT--SGECIDDAKVCDRNFDCTDRSDESSLC 3222
>AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane cell
adhesion receptorMUA-3 precursor protein.
Length = 3767
Score = 27.9 bits (59), Expect = 7.7
Identities = 18/64 (28%), Positives = 27/64 (42%), Gaps = 1/64 (1%)
Frame = -2
Query: 517 CDQPFNVDCGDRTELQPPKPNSQCPRRNGFFAHPDPSVCNIFYNCIEGE-ATEVKCTAGL 341
C P N D++ P KP C A+P + C+ F +C + E +C G
Sbjct: 2645 CQCPINAK--DQSP-DPRKPGRICSLSVNECANPSLNSCSAFADCFDEENGYRCRCRNGY 2701
Query: 340 HFDE 329
H D+
Sbjct: 2702 HDDD 2705
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,958,528
Number of Sequences: 27780
Number of extensions: 390830
Number of successful extensions: 1822
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 1530
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1798
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1687292480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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