Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P28_pT_I20
(831 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex det... 26 0.37
DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex det... 26 0.37
DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex det... 25 0.86
DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex det... 25 0.86
DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex det... 25 0.86
DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex det... 25 1.1
DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex det... 25 1.1
DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex det... 25 1.1
DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex det... 25 1.1
DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex det... 24 1.5
DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex det... 24 1.5
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 24 2.0
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 23 3.5
AB253415-1|BAE86926.1| 588|Apis mellifera alpha-glucosidase pro... 23 3.5
DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex det... 23 4.6
DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex det... 23 4.6
DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex det... 23 4.6
DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex det... 23 4.6
AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex det... 23 4.6
AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex det... 23 4.6
AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex det... 23 4.6
AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein. 22 6.0
>DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 26.2 bits (55), Expect = 0.37
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +1
Query: 220 IAASISFGSLYNNHYSY*KLYQNNFNELGIDTTLIY 327
I +S+S +++NN+Y Y NN+N + L Y
Sbjct: 80 IISSLSNNTIHNNNYKY-NYNNNNYNNNNYNKKLYY 114
>DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 26.2 bits (55), Expect = 0.37
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +1
Query: 220 IAASISFGSLYNNHYSY*KLYQNNFNELGIDTTLIY 327
I +S+S +++NN+Y Y NN+N + L Y
Sbjct: 80 IISSLSNNTIHNNNYKY-NYNNNNYNNNNYNKKLYY 114
>DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 25.0 bits (52), Expect = 0.86
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = +1
Query: 220 IAASISFGSLYNNHYSY*KLYQNNFNEL 303
I +S+S YNN+ +Y KLY NN+ +L
Sbjct: 81 IISSLSNNYNYNNN-NYKKLYCNNYKKL 107
>DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 25.0 bits (52), Expect = 0.86
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = +1
Query: 220 IAASISFGSLYNNHYSY*KLYQNNFNEL 303
I +S+S YNN+ +Y KLY NN+ +L
Sbjct: 81 IISSLSNNYNYNNN-NYKKLYCNNYKKL 107
>DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 25.0 bits (52), Expect = 0.86
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = +1
Query: 220 IAASISFGSLYNNHYSY*KLYQNNFNEL 303
I +S+S YNN+ +Y KLY NN+ +L
Sbjct: 81 IISSLSNNYNYNNN-NYKKLYCNNYRKL 107
>DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 24.6 bits (51), Expect = 1.1
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = +1
Query: 220 IAASISFGSLYNNHYSY*KLYQNNFNE 300
I +S+S +++NN+Y Y NN+N+
Sbjct: 81 IISSLSNNTIHNNNYKY-NYNNNNYNK 106
>DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 24.6 bits (51), Expect = 1.1
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = +1
Query: 220 IAASISFGSLYNNHYSY*KLYQNNFNE 300
I +S+S +++NN+Y Y NN+N+
Sbjct: 81 IISSLSNNTIHNNNYKY-NYNNNNYNK 106
>DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 24.6 bits (51), Expect = 1.1
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = +1
Query: 220 IAASISFGSLYNNHYSY*KLYQNNFNE 300
I +S+S +++NN+Y Y NN+N+
Sbjct: 81 IISSLSNNTIHNNNYKY-NYNNNNYNK 106
>DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 24.6 bits (51), Expect = 1.1
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = +1
Query: 220 IAASISFGSLYNNHYSY*KLYQNNFNE 300
I +S+S +++NN+Y Y NN+N+
Sbjct: 81 IISSLSNNTIHNNNYKY-NYNNNNYNK 106
>DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 24.2 bits (50), Expect = 1.5
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +1
Query: 220 IAASISFGSLYNNHYSY*KLYQNNFN 297
I +S+S Y+N+ +Y Y NN+N
Sbjct: 81 IISSLSNNYKYSNYNNYNNNYNNNYN 106
>DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 24.2 bits (50), Expect = 1.5
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +1
Query: 220 IAASISFGSLYNNHYSY*KLYQNNFN 297
I +S+S Y+N+ +Y Y NN+N
Sbjct: 81 IISSLSNNYKYSNYNNYNNNYNNNYN 106
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 23.8 bits (49), Expect = 2.0
Identities = 8/23 (34%), Positives = 15/23 (65%)
Frame = +1
Query: 235 SFGSLYNNHYSY*KLYQNNFNEL 303
++ + YNN+ +Y Y NN+ +L
Sbjct: 329 NYNNNYNNYNNYNNNYNNNYKKL 351
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 23.0 bits (47), Expect = 3.5
Identities = 9/18 (50%), Positives = 10/18 (55%)
Frame = +1
Query: 649 SHENNPPSAFFCSKSNEP 702
SHENN P+ CS P
Sbjct: 870 SHENNQPTMNKCSDRKRP 887
>AB253415-1|BAE86926.1| 588|Apis mellifera alpha-glucosidase
protein.
Length = 588
Score = 23.0 bits (47), Expect = 3.5
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = -2
Query: 101 HNTIVVATCKITDSNLCFIYE*SVYSNLTLSK 6
+NTIV + + N IY SV SNLT+++
Sbjct: 512 NNTIVDISKLVNKRNNAKIYTSSVNSNLTVNQ 543
>DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 22.6 bits (46), Expect = 4.6
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = +1
Query: 220 IAASISFGSLYNNHYSY*KLYQNNFN 297
I +S+S +++NN+ +Y KL N N
Sbjct: 81 IISSLSNKTIHNNNNNYKKLQYYNIN 106
>DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 22.6 bits (46), Expect = 4.6
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = +1
Query: 220 IAASISFGSLYNNHYSY*KLYQNNFN 297
I +S+S +++NN+ +Y KL N N
Sbjct: 81 IISSLSNKTIHNNNNNYKKLQYYNIN 106
>DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex
determiner protein.
Length = 176
Score = 22.6 bits (46), Expect = 4.6
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = +1
Query: 220 IAASISFGSLYNNHYSY*KLYQNNFN 297
I +S+S +++NN+ +Y KL N N
Sbjct: 81 IISSLSNKTIHNNNNNYKKLQYYNIN 106
>DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 22.6 bits (46), Expect = 4.6
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = +1
Query: 220 IAASISFGSLYNNHYSY*KLYQNNFN 297
I +S+S +++NN+ +Y KL N N
Sbjct: 81 IISSLSNKTIHNNNNNYKKLQYYNIN 106
>AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 22.6 bits (46), Expect = 4.6
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +1
Query: 250 YNNHYSY*KLYQNNFN 297
YNN+Y+ KLY N N
Sbjct: 314 YNNNYNSKKLYYNIIN 329
>AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.6 bits (46), Expect = 4.6
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +1
Query: 250 YNNHYSY*KLYQNNFN 297
YNN+Y+ KLY N N
Sbjct: 325 YNNNYNSKKLYYNIIN 340
>AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex
determiner protein.
Length = 410
Score = 22.6 bits (46), Expect = 4.6
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = +1
Query: 220 IAASISFGSLYNNHYSY*KLYQNNFN 297
I +S+S +++NN+ +Y KL N N
Sbjct: 314 IISSLSNKTIHNNNNNYKKLQYYNIN 339
>AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein.
Length = 554
Score = 22.2 bits (45), Expect = 6.0
Identities = 7/25 (28%), Positives = 16/25 (64%)
Frame = -1
Query: 363 IHYVRQQGLFVSVNQRRINSQFIEI 289
+ Y Q+G+ V+ +R+ QF+++
Sbjct: 518 LRYYYQRGILAKVDGQRLVYQFVDV 542
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 230,949
Number of Sequences: 438
Number of extensions: 5504
Number of successful extensions: 30
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26581563
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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