Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P28_pT_I19
(676 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z72511-2|CAA96656.1| 413|Caenorhabditis elegans Hypothetical pr... 131 4e-31
U00064-2|AAD31934.2| 329|Caenorhabditis elegans Hypothetical pr... 50 2e-06
Z97628-1|CAB10725.1| 250|Caenorhabditis elegans Hypothetical pr... 40 0.002
AC024757-1|AAF59450.3| 490|Caenorhabditis elegans Hypothetical ... 32 0.43
AF022985-13|AAB69968.1| 375|Caenorhabditis elegans Hypothetical... 30 1.7
AC024838-4|AAF60819.1| 99|Caenorhabditis elegans Hypothetical ... 30 1.7
U80028-6|AAQ01536.1| 365|Caenorhabditis elegans Serpentine rece... 29 4.0
AL021470-2|CAE17952.1| 398|Caenorhabditis elegans Hypothetical ... 29 4.0
AL021470-1|CAA16292.1| 401|Caenorhabditis elegans Hypothetical ... 29 4.0
AF273816-1|AAG15165.1| 274|Caenorhabditis elegans nuclear recep... 29 4.0
AF067214-10|AAC17009.1| 206|Caenorhabditis elegans Hypothetical... 28 7.0
U29096-4|AAA68408.1| 1599|Caenorhabditis elegans Hypothetical pr... 27 9.2
AL021492-4|CAA16384.1| 492|Caenorhabditis elegans Hypothetical ... 27 9.2
AC006809-1|AAK71409.1| 391|Caenorhabditis elegans Hypothetical ... 27 9.2
>Z72511-2|CAA96656.1| 413|Caenorhabditis elegans Hypothetical
protein F55A11.2 protein.
Length = 413
Score = 131 bits (317), Expect = 4e-31
Identities = 78/222 (35%), Positives = 127/222 (57%), Gaps = 22/222 (9%)
Frame = -3
Query: 647 RKSLFDDRPTEIQELTYIIKGDLNSLNQQIARLGEMPRGXXXXXXXXXXXVL-----ALQ 483
+KS +++R ++I L+ I+K D+ LN+QI +L E + + LQ
Sbjct: 174 KKSCYEER-SQIDHLSSIVKSDITGLNKQIGQLQEFSKRRAGNMKNQNSGHIQLVVVGLQ 232
Query: 482 SRLASMSNQFKQVLEVRSENLKQQNSRREQFSRVTRVVKEVPS----------LLQQDE- 336
S+LA++ ++ VLE+ +E +K + +RR++FS V +PS LLQ DE
Sbjct: 233 SKLANVGKDYQSVLEISTETMKAEKNRRDKFSSGAAVPMGLPSSSSGANVRSKLLQDDEQ 292
Query: 335 -----VSIDLGEATSLQAQQ-FAFRDDTDSYVQQRAETMHNIESTIVELGGIFQQLAHMV 174
+++D+G +++Q+QQ RD + Y Q R+ TM IE +I ELG IF QLA +V
Sbjct: 293 HGSSSIALDMGALSNMQSQQTMQQRDSSLEYAQARSNTMATIEGSISELGQIFSQLASLV 352
Query: 173 KEQDEAIGRIDANIHEAEMNVEAGHREILKYFQNVTGNRALM 48
EQ E I RID+N+ + +N++ H E+++Y QN++ NR LM
Sbjct: 353 SEQGEMITRIDSNVEDTALNIDMAHSELVRYLQNISKNRWLM 394
>U00064-2|AAD31934.2| 329|Caenorhabditis elegans Hypothetical
protein ZC155.7 protein.
Length = 329
Score = 50.0 bits (114), Expect = 2e-06
Identities = 32/147 (21%), Positives = 66/147 (44%), Gaps = 2/147 (1%)
Frame = -3
Query: 485 QSRLASMSNQFKQVL-EVRSENLKQQNSRREQFSRVTRVVKEVPSLLQQDE-VSIDLGEA 312
++ A++S Q+ E R LK + + + V + L+ +D+ +
Sbjct: 161 ENAAATLSLTLSQITDEFRGRQLKYLSDIQNRSRNVDNYLITTDPLIDAPNWAELDVSPS 220
Query: 311 TSLQAQQFAFRDDTDSYVQQRAETMHNIESTIVELGGIFQQLAHMVKEQDEAIGRIDANI 132
T + Q + D V++R + + + ++I EL +FQ L+ M+ +Q I RID N+
Sbjct: 221 TEISMAQLQQFMNNDREVREREKEVMAVNTSIRELNTLFQDLSEMIVDQGSVIDRIDYNV 280
Query: 131 HEAEMNVEAGHREILKYFQNVTGNRAL 51
+ + V ++ K + GN+ +
Sbjct: 281 EQTSIRVSKAVEDVFKAERYQKGNKKM 307
>Z97628-1|CAB10725.1| 250|Caenorhabditis elegans Hypothetical
protein VF39H2L.1 protein.
Length = 250
Score = 39.5 bits (88), Expect = 0.002
Identities = 18/59 (30%), Positives = 33/59 (55%)
Frame = -3
Query: 260 VQQRAETMHNIESTIVELGGIFQQLAHMVKEQDEAIGRIDANIHEAEMNVEAGHREILK 84
+++RAE IE + +L IFQ+L +V EQ + + I+ + A +V+ G+ + K
Sbjct: 132 MKERAEATVKIEKDMADLEKIFQELGRIVHEQHDVVDSIEEQVERATEDVKRGNENLKK 190
>AC024757-1|AAF59450.3| 490|Caenorhabditis elegans Hypothetical
protein Y37E11AL.5 protein.
Length = 490
Score = 31.9 bits (69), Expect = 0.43
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Frame = +3
Query: 159 FILFFYHMSQLLKYASQLHNSAFNVMHSFSSLLYI*V--CIISECKLLCL*TCSFTQIYA 332
F +F H++ LL + + F +FS+LL+ + C+I+ LLCL T S
Sbjct: 214 FFVFMIHLAHLLLFLAPQVGEPF----TFSTLLHFILQFCVIASAGLLCLVTPSIFTFST 269
Query: 333 YFIL 344
Y++L
Sbjct: 270 YYLL 273
>AF022985-13|AAB69968.1| 375|Caenorhabditis elegans Hypothetical
protein T15B7.15 protein.
Length = 375
Score = 29.9 bits (64), Expect = 1.7
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = -3
Query: 266 SYVQQRAETMHNIESTIVELGGIFQQLAHMVKEQDEAIGRIDA 138
S + + H IE I+E+G L +V EQ+E I R +A
Sbjct: 108 SIMDTQLGNQHRIELEIIEMGAKLNSLQGVVDEQEETIRRKEA 150
>AC024838-4|AAF60819.1| 99|Caenorhabditis elegans Hypothetical
protein Y59E9AL.5 protein.
Length = 99
Score = 29.9 bits (64), Expect = 1.7
Identities = 15/48 (31%), Positives = 21/48 (43%)
Frame = +1
Query: 274 SSLNANCCACKLVASPKSMLTSSCCNRDGTSFTTRVTLENCSRLLFCC 417
+S CCAC + +S T C D T+ + + CSR CC
Sbjct: 45 ASRRPTCCACWMRRKKESTTTKVCVQDDCTTCSC-TSASRCSRCSPCC 91
>U80028-6|AAQ01536.1| 365|Caenorhabditis elegans Serpentine
receptor, class w protein123 protein.
Length = 365
Score = 28.7 bits (61), Expect = 4.0
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +1
Query: 349 NRDGTSFTTRVTLENCSRLLFCCFKFSERTSKT 447
N+ G F+ +TL C+ L+ C F S+ S T
Sbjct: 308 NQFGAIFSMLITLNTCTHLIVCLFMSSQYRSTT 340
>AL021470-2|CAE17952.1| 398|Caenorhabditis elegans Hypothetical
protein Y17D7A.3b protein.
Length = 398
Score = 28.7 bits (61), Expect = 4.0
Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Frame = -3
Query: 341 DEVSIDLGEATSLQAQQFAFRDDT--DSYVQQRAETMHNIESTIVELGGIFQQL 186
+E+ +D+ T+ +Q + DT DSYV Q + M ++ VEL + QL
Sbjct: 257 NEIEVDMSWCTNFSNEQMRYFLDTSHDSYVYQVMDEMLGLKPNDVELSYMMCQL 310
>AL021470-1|CAA16292.1| 401|Caenorhabditis elegans Hypothetical
protein Y17D7A.3a protein.
Length = 401
Score = 28.7 bits (61), Expect = 4.0
Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Frame = -3
Query: 341 DEVSIDLGEATSLQAQQFAFRDDT--DSYVQQRAETMHNIESTIVELGGIFQQL 186
+E+ +D+ T+ +Q + DT DSYV Q + M ++ VEL + QL
Sbjct: 257 NEIEVDMSWCTNFSNEQMRYFLDTSHDSYVYQVMDEMLGLKPNDVELSYMMCQL 310
>AF273816-1|AAG15165.1| 274|Caenorhabditis elegans nuclear receptor
NHR-65 protein.
Length = 274
Score = 28.7 bits (61), Expect = 4.0
Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Frame = -3
Query: 341 DEVSIDLGEATSLQAQQFAFRDDT--DSYVQQRAETMHNIESTIVELGGIFQQL 186
+E+ +D+ T+ +Q + DT DSYV Q + M ++ VEL + QL
Sbjct: 130 NEIEVDMSWCTNFSNEQMRYFLDTSHDSYVYQVMDEMLGLKPNDVELSYMMCQL 183
>AF067214-10|AAC17009.1| 206|Caenorhabditis elegans Hypothetical
protein F56C3.9 protein.
Length = 206
Score = 27.9 bits (59), Expect = 7.0
Identities = 16/40 (40%), Positives = 25/40 (62%), Gaps = 2/40 (5%)
Frame = -1
Query: 322 WVKLQVYKHSNLHSEMIQTHMYNREL--KLCITLKALLWS 209
WVK +V+K+ L+SE Q +Y+ EL +LC L + +S
Sbjct: 104 WVKREVHKY--LNSEAFQNEIYDTELLVQLCYLLHSQNYS 141
>U29096-4|AAA68408.1| 1599|Caenorhabditis elegans Hypothetical protein
F30H5.3 protein.
Length = 1599
Score = 27.5 bits (58), Expect = 9.2
Identities = 17/69 (24%), Positives = 28/69 (40%), Gaps = 8/69 (11%)
Frame = +1
Query: 268 SVSSLNANCCACKLVASPKSMLTSSCCN-----RDGTSFTTRV---TLENCSRLLFCCFK 423
S+++ CC + +PKS+ C N R+ S R+ +NC FC F
Sbjct: 1081 SLANQRYQCCGATPITTPKSIAALGCPNNQVAFREKASNAPRICTAASQNCPTGFFCQFS 1140
Query: 424 FSERTSKTC 450
+ + C
Sbjct: 1141 TANNQFQCC 1149
>AL021492-4|CAA16384.1| 492|Caenorhabditis elegans Hypothetical
protein Y45F10D.9 protein.
Length = 492
Score = 27.5 bits (58), Expect = 9.2
Identities = 25/115 (21%), Positives = 50/115 (43%), Gaps = 3/115 (2%)
Frame = -3
Query: 443 LEVRSENLKQQNSRREQFSRVTRVVKEVPSLLQQDEVSIDLGEATSLQAQQFAFRDDTDS 264
LE + E L E+ S + +++ L++++ +I L + + + DT+S
Sbjct: 207 LEKQVEKLSGVKEEFEEMSEKFKELEDEVELVKEERENIRL-LVEDKEDEVADLKQDTES 265
Query: 263 YVQQRAETMHNIE---STIVELGGIFQQLAHMVKEQDEAIGRIDANIHEAEMNVE 108
+Q E +E + + E G QL + IG++ A + A+ N+E
Sbjct: 266 LQKQLEENQEELEIVGNMLREEQGKVDQLQKRNVAHQKEIGKLRAELGTAQRNLE 320
>AC006809-1|AAK71409.1| 391|Caenorhabditis elegans Hypothetical
protein Y5H2A.2 protein.
Length = 391
Score = 27.5 bits (58), Expect = 9.2
Identities = 14/59 (23%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Frame = -3
Query: 353 LLQQDEVSIDLGEATSLQAQQFAFRDDT--DSYVQQRAETMHNIESTIVELGGIFQQLA 183
++ + V +D+G T +QFA+ ++ D + + + M ++ T +EL + QL+
Sbjct: 243 IVDRRNVKLDIGWLTDYSVEQFAYYIESRRDGVLNKPLQAMIDLNPTDIELNYMLAQLS 301
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,838,176
Number of Sequences: 27780
Number of extensions: 281175
Number of successful extensions: 1008
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 970
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1006
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1529108810
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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