Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P28_pT_I13
(674 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC035727-1|AAH35727.1| 337|Homo sapiens Lix1 homolog (mouse)-li... 245 1e-64
BC036467-1|AAH36467.1| 282|Homo sapiens Lix1 homolog (mouse) pr... 199 8e-51
AK098400-1|BAC05298.1| 282|Homo sapiens protein ( Homo sapiens ... 199 8e-51
X99325-1|CAA67700.1| 426|Homo sapiens Ste20-like kinase protein. 30 6.5
D21205-1|BAA04747.1| 630|Homo sapiens estrogen responsive finge... 30 8.6
BC042541-1|AAH42541.1| 630|Homo sapiens tripartite motif-contai... 30 8.6
BC016924-1|AAH16924.1| 630|Homo sapiens tripartite motif-contai... 30 8.6
AB208994-1|BAD92231.1| 644|Homo sapiens tripartite motif-contai... 30 8.6
>BC035727-1|AAH35727.1| 337|Homo sapiens Lix1 homolog (mouse)-like
protein.
Length = 337
Score = 245 bits (599), Expect = 1e-64
Identities = 116/151 (76%), Positives = 132/151 (87%)
Frame = -1
Query: 674 YVXYVTLPGGACFGSFQNCPTKAEARRSAAKIALMNSVFNEHESRRISDHFIEKAVAEAR 495
YV YVTLPGG+CFGSFQ CPTKAEARRSAAKIALMNSVFNEH SRRI+D FIEK+V+EA
Sbjct: 136 YVCYVTLPGGSCFGSFQFCPTKAEARRSAAKIALMNSVFNEHPSRRITDEFIEKSVSEAL 195
Query: 494 ASFAGDTSNPHQDPSAGIAAFRFMLEANKGRTMLEFQELMTVFQLLHWNGSLRAMRERQC 315
ASF G+ +P+ GI AFRFMLE+NKG++MLEFQELMTVFQLLHWNGSL+AMRERQC
Sbjct: 196 ASFNGNREEA-DNPNTGIGAFRFMLESNKGKSMLEFQELMTVFQLLHWNGSLKAMRERQC 254
Query: 314 SRQEVVAHYSARALDDAMREQMAREWATRER 222
SRQEV+AHYS RALDD +R QMA +W +RE+
Sbjct: 255 SRQEVLAHYSHRALDDDIRHQMALDWVSREQ 285
>BC036467-1|AAH36467.1| 282|Homo sapiens Lix1 homolog (mouse)
protein.
Length = 282
Score = 199 bits (485), Expect = 8e-51
Identities = 91/153 (59%), Positives = 122/153 (79%)
Frame = -1
Query: 674 YVXYVTLPGGACFGSFQNCPTKAEARRSAAKIALMNSVFNEHESRRISDHFIEKAVAEAR 495
+V YVTLPGG+CFG+FQ C ++AEARR AAK+AL+NS+FNE SRRI+ FI ++V EA
Sbjct: 66 FVSYVTLPGGSCFGNFQCCLSRAEARRDAAKVALINSLFNELPSRRITKEFIMESVQEAV 125
Query: 494 ASFAGDTSNPHQDPSAGIAAFRFMLEANKGRTMLEFQELMTVFQLLHWNGSLRAMRERQC 315
AS +G T + DPS + A+ +MLE+N G+TMLEFQELMT+FQLLHWNGSL+A+RE +C
Sbjct: 126 ASTSG-TLDDADDPSTSVGAYHYMLESNMGKTMLEFQELMTIFQLLHWNGSLKALRETKC 184
Query: 314 SRQEVVAHYSARALDDAMREQMAREWATREREA 216
SRQEV+++YS +LD+ MR MA +W +ER++
Sbjct: 185 SRQEVISYYSQYSLDEKMRSHMALDWIMKERDS 217
>AK098400-1|BAC05298.1| 282|Homo sapiens protein ( Homo sapiens
cDNA FLJ25534 fis, clone CBR08513. ).
Length = 282
Score = 199 bits (485), Expect = 8e-51
Identities = 91/153 (59%), Positives = 122/153 (79%)
Frame = -1
Query: 674 YVXYVTLPGGACFGSFQNCPTKAEARRSAAKIALMNSVFNEHESRRISDHFIEKAVAEAR 495
+V YVTLPGG+CFG+FQ C ++AEARR AAK+AL+NS+FNE SRRI+ FI ++V EA
Sbjct: 66 FVSYVTLPGGSCFGNFQCCLSRAEARRDAAKVALINSLFNELPSRRITKEFIMESVQEAV 125
Query: 494 ASFAGDTSNPHQDPSAGIAAFRFMLEANKGRTMLEFQELMTVFQLLHWNGSLRAMRERQC 315
AS +G T + DPS + A+ +MLE+N G+TMLEFQELMT+FQLLHWNGSL+A+RE +C
Sbjct: 126 ASTSG-TLDDADDPSTSVGAYHYMLESNMGKTMLEFQELMTIFQLLHWNGSLKALRETKC 184
Query: 314 SRQEVVAHYSARALDDAMREQMAREWATREREA 216
SRQEV+++YS +LD+ MR MA +W +ER++
Sbjct: 185 SRQEVISYYSQYSLDEKMRSHMALDWIMKERDS 217
>X99325-1|CAA67700.1| 426|Homo sapiens Ste20-like kinase protein.
Length = 426
Score = 30.3 bits (65), Expect = 6.5
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = +3
Query: 330 HRSQRPVPVEQLEYRHQLLEFQHRPTFVRLQHEPKRSDTSAGVL 461
H SQ+P + + R Q L RP F L+ + K+S S G L
Sbjct: 340 HSSQKPADAVKRQPRSQCLSTLVRPVFGELKEKHKQSGGSVGAL 383
>D21205-1|BAA04747.1| 630|Homo sapiens estrogen responsive finger
protein protein.
Length = 630
Score = 29.9 bits (64), Expect = 8.6
Identities = 15/47 (31%), Positives = 30/47 (63%)
Frame = +3
Query: 297 YDFLPRALPLAHRSQRPVPVEQLEYRHQLLEFQHRPTFVRLQHEPKR 437
++FL +A L S +PV + ++E H+L++ H+ T + L++E K+
Sbjct: 305 FEFLEKASKLRGISTKPVYIPEVELNHKLIKGIHQST-IDLKNELKQ 350
>BC042541-1|AAH42541.1| 630|Homo sapiens tripartite
motif-containing 25 protein.
Length = 630
Score = 29.9 bits (64), Expect = 8.6
Identities = 15/47 (31%), Positives = 30/47 (63%)
Frame = +3
Query: 297 YDFLPRALPLAHRSQRPVPVEQLEYRHQLLEFQHRPTFVRLQHEPKR 437
++FL +A L S +PV + ++E H+L++ H+ T + L++E K+
Sbjct: 305 FEFLEKASKLRGISTKPVYIPEVELNHKLIKGIHQST-IDLKNELKQ 350
>BC016924-1|AAH16924.1| 630|Homo sapiens tripartite
motif-containing 25 protein.
Length = 630
Score = 29.9 bits (64), Expect = 8.6
Identities = 15/47 (31%), Positives = 30/47 (63%)
Frame = +3
Query: 297 YDFLPRALPLAHRSQRPVPVEQLEYRHQLLEFQHRPTFVRLQHEPKR 437
++FL +A L S +PV + ++E H+L++ H+ T + L++E K+
Sbjct: 305 FEFLEKASKLRGISTKPVYIPEVELNHKLIKGIHQST-IDLKNELKQ 350
>AB208994-1|BAD92231.1| 644|Homo sapiens tripartite
motif-containing 25 variant protein.
Length = 644
Score = 29.9 bits (64), Expect = 8.6
Identities = 15/47 (31%), Positives = 30/47 (63%)
Frame = +3
Query: 297 YDFLPRALPLAHRSQRPVPVEQLEYRHQLLEFQHRPTFVRLQHEPKR 437
++FL +A L S +PV + ++E H+L++ H+ T + L++E K+
Sbjct: 319 FEFLEKASKLRGISTKPVYIPEVELNHKLIKGIHQST-IDLKNELKQ 364
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,276,030
Number of Sequences: 237096
Number of extensions: 1802893
Number of successful extensions: 5352
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 5131
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5346
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7615267504
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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