Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_pT_I12
         (612 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000DC0923 Cluster: UPI0000DC0923 related cluster; n...    58   2e-07
UniRef50_Q9TS94 Cluster: Epidermal growth factor inhibitor; n=2;...    53   6e-06
UniRef50_P38543 Cluster: GTP-binding nuclear protein Ran; n=2; G...    45   0.001
UniRef50_Q9VUN3 Cluster: GTP-binding nuclear protein Ran-like; n...    37   0.43 
UniRef50_UPI00005A251C Cluster: PREDICTED: similar to RAN, membe...    33   4.0  
UniRef50_A1DA30 Cluster: Putative uncharacterized protein; n=1; ...    33   4.0  
UniRef50_Q6MYA2 Cluster: Zinc finger protein, putative; n=2; Asp...    33   7.1  
UniRef50_A4AV94 Cluster: Putative uncharacterized protein; n=1; ...    32   9.3  

>UniRef50_UPI0000DC0923 Cluster: UPI0000DC0923 related cluster; n=1;
           Rattus norvegicus|Rep: UPI0000DC0923 UniRef100 entry -
           Rattus norvegicus
          Length = 133

 Score = 57.6 bits (133), Expect = 2e-07
 Identities = 29/49 (59%), Positives = 32/49 (65%)
 Frame = -1

Query: 609 LIGDGNLEFVAMPALLPPEVTMDPQWQNQIEKDLQDAQNTALPEEDEDL 463
           L GD NLEFVAM A    EV MDP    Q E DL+  Q TALP+ED+DL
Sbjct: 85  LTGDPNLEFVAMLAFASSEVVMDPPLAAQYEHDLEVTQRTALPDEDDDL 133


>UniRef50_Q9TS94 Cluster: Epidermal growth factor inhibitor; n=2;
           Eutheria|Rep: Epidermal growth factor inhibitor -
           Oryctolagus cuniculus (Rabbit)
          Length = 48

 Score = 52.8 bits (121), Expect = 6e-06
 Identities = 25/35 (71%), Positives = 26/35 (74%)
 Frame = -1

Query: 609 LIGDGNLEFVAMPALLPPEVTMDPQWQNQIEKDLQ 505
           LIGD NLEFVAMPAL PPEV MDP    Q E DL+
Sbjct: 13  LIGDPNLEFVAMPALAPPEVVMDPALAAQYEHDLE 47


>UniRef50_P38543 Cluster: GTP-binding nuclear protein Ran; n=2;
           Giardia intestinalis|Rep: GTP-binding nuclear protein
           Ran - Giardia lamblia (Giardia intestinalis)
          Length = 226

 Score = 45.2 bits (102), Expect = 0.001
 Identities = 19/46 (41%), Positives = 28/46 (60%)
 Frame = -1

Query: 609 LIGDGNLEFVAMPALLPPEVTMDPQWQNQIEKDLQDAQNTALPEED 472
           L+ D  ++F   PALLP ++ MD   + QI KDL+   N  LP++D
Sbjct: 181 LLNDPTIQFSQAPALLPADIGMDAATREQINKDLEAVNNVPLPDDD 226


>UniRef50_Q9VUN3 Cluster: GTP-binding nuclear protein Ran-like;
           n=88; Eukaryota|Rep: GTP-binding nuclear protein
           Ran-like - Drosophila melanogaster (Fruit fly)
          Length = 217

 Score = 36.7 bits (81), Expect = 0.43
 Identities = 15/43 (34%), Positives = 25/43 (58%)
 Frame = -1

Query: 609 LIGDGNLEFVAMPALLPPEVTMDPQWQNQIEKDLQDAQNTALP 481
           L+GD +L+ V  PA+ PP+V    +   Q+E    +A++  LP
Sbjct: 168 LVGDPSLQLVQSPAIQPPKVVFTDEMSRQVESLFNEAKSKPLP 210


>UniRef50_UPI00005A251C Cluster: PREDICTED: similar to RAN, member
           RAS oncogene family; n=1; Canis lupus familiaris|Rep:
           PREDICTED: similar to RAN, member RAS oncogene family -
           Canis familiaris
          Length = 196

 Score = 33.5 bits (73), Expect = 4.0
 Identities = 12/24 (50%), Positives = 17/24 (70%)
 Frame = -1

Query: 609 LIGDGNLEFVAMPALLPPEVTMDP 538
           L GD NLEF+ +P L PP++ + P
Sbjct: 167 LTGDPNLEFITVPPLAPPDIVIHP 190


>UniRef50_A1DA30 Cluster: Putative uncharacterized protein; n=1;
           Neosartorya fischeri NRRL 181|Rep: Putative
           uncharacterized protein - Neosartorya fischeri (strain
           ATCC 1020 / DSM 3700 / NRRL 181)(Aspergillus
           fischerianus (strain ATCC 1020 / DSM 3700 / NRRL 181))
          Length = 526

 Score = 33.5 bits (73), Expect = 4.0
 Identities = 20/59 (33%), Positives = 26/59 (44%), Gaps = 2/59 (3%)
 Frame = +1

Query: 106 NNSDQIGINTYWAINAKC--FYDNCNKNELHINNTHIFVAFQYKSLELQFYKTQTRGAT 276
           N  D+ G   Y  +N K   FYD C K  L     HI  +   K    +FY T+ +G T
Sbjct: 227 NTDDKYGGGPYDDLNTKLLKFYDICGKIGLQEYQFHITFSLMLKGKAEKFYLTKVKGKT 285


>UniRef50_Q6MYA2 Cluster: Zinc finger protein, putative; n=2;
            Aspergillus fumigatus|Rep: Zinc finger protein, putative
            - Aspergillus fumigatus (Sartorya fumigata)
          Length = 1650

 Score = 32.7 bits (71), Expect = 7.1
 Identities = 14/35 (40%), Positives = 21/35 (60%)
 Frame = +3

Query: 435  HWVHPLIIFISLHLPQEEQYFVHLEDLFQFGSAIE 539
            H+V+ L+IFI   LP +EQY   ++D    G  +E
Sbjct: 1366 HFVNALLIFIQKSLPVQEQYVASIKDSDSLGPLLE 1400


>UniRef50_A4AV94 Cluster: Putative uncharacterized protein; n=1;
           Flavobacteriales bacterium HTCC2170|Rep: Putative
           uncharacterized protein - Flavobacteriales bacterium
           HTCC2170
          Length = 167

 Score = 32.3 bits (70), Expect = 9.3
 Identities = 17/67 (25%), Positives = 27/67 (40%)
 Frame = +1

Query: 10  KVSNHFKLIXLCVSMLWVYKELSYKFVYKCIINNSDQIGINTYWAINAKCFYDNCNKNEL 189
           K+ ++ K I    +   V+    Y FV KC+   S      T+  +   C Y N  K  +
Sbjct: 4   KIFSYLKFIFTATNQHGVHSPFIYNFVTKCLYKKSKFKHPKTFRVLLESCSYFNVKKISI 63

Query: 190 HINNTHI 210
              N H+
Sbjct: 64  IPKNMHV 70


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 586,931,743
Number of Sequences: 1657284
Number of extensions: 11725597
Number of successful extensions: 30049
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 28754
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30036
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 43977329078
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)