Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P28_pT_I09
(394 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_A6YPK4 Cluster: Cytochrome c oxidase; n=3; Neoptera|Rep... 93 1e-18
UniRef50_Q9VMS1 Cluster: CG14028-PA; n=6; Diptera|Rep: CG14028-P... 79 3e-14
UniRef50_P09669 Cluster: Cytochrome c oxidase polypeptide VIc pr... 68 7e-11
UniRef50_P04038 Cluster: Cytochrome c oxidase polypeptide VIc; n... 67 1e-10
UniRef50_Q4PM34 Cluster: Cytochrome c oxidase subunit VIc; n=1; ... 65 4e-10
UniRef50_UPI00015548E5 Cluster: PREDICTED: similar to cytochrome... 63 2e-09
UniRef50_UPI0000587B5E Cluster: PREDICTED: similar to cytochrome... 62 3e-09
UniRef50_UPI00004477A4 Cluster: PREDICTED: hypothetical protein;... 54 1e-06
UniRef50_Q8T970 Cluster: AT20031p; n=2; Sophophora|Rep: AT20031p... 46 3e-04
UniRef50_A7GNI6 Cluster: Glycosyl transferase group 1; n=1; Baci... 35 0.48
UniRef50_A2E5I4 Cluster: Putative uncharacterized protein; n=1; ... 35 0.48
UniRef50_Q7SAZ9 Cluster: Putative uncharacterized protein NCU076... 34 1.1
UniRef50_P20610 Cluster: Cytochrome c oxidase subunit 7s; n=2; D... 33 2.6
UniRef50_Q1AST6 Cluster: Putative uncharacterized protein precur... 32 4.5
>UniRef50_A6YPK4 Cluster: Cytochrome c oxidase; n=3; Neoptera|Rep:
Cytochrome c oxidase - Triatoma infestans (Assassin bug)
Length = 76
Score = 93.5 bits (222), Expect = 1e-18
Identities = 42/73 (57%), Positives = 58/73 (79%)
Frame = -1
Query: 283 SAVSTASKPQMRGLLNAVIKRNIIVALALSGVAGFTFKQLIGNERKRKYAEFYRTYDAEK 104
SAVST+ KPQ+RGLL++ IKRN+I+ L LS +GF FK IG+ RK++YAEFY+ YDAE+
Sbjct: 3 SAVSTSVKPQLRGLLHSQIKRNLIIGLVLSISSGFLFKTFIGDARKKQYAEFYKNYDAEE 62
Query: 103 EFEEMRKKGRFQA 65
+F+ M+ G FQ+
Sbjct: 63 DFKRMKSLGLFQS 75
>UniRef50_Q9VMS1 Cluster: CG14028-PA; n=6; Diptera|Rep: CG14028-PA -
Drosophila melanogaster (Fruit fly)
Length = 77
Score = 79.0 bits (186), Expect = 3e-14
Identities = 38/78 (48%), Positives = 50/78 (64%)
Frame = -1
Query: 295 MAGESAVSTASKPQMRGLLNAVIKRNIIVALALSGVAGFTFKQLIGNERKRKYAEFYRTY 116
MA A S+A P +RGL NA IKRN+ V+L L+ V +K L+ + +K YA+FY Y
Sbjct: 1 MANTPATSSAG-PVLRGLHNATIKRNLAVSLGLTAVVTIAYKILVNDPKKAAYADFYSKY 59
Query: 115 DAEKEFEEMRKKGRFQAC 62
DA K FE M+ GRFQ+C
Sbjct: 60 DANKSFERMKAAGRFQSC 77
>UniRef50_P09669 Cluster: Cytochrome c oxidase polypeptide VIc
precursor; n=36; Euteleostomi|Rep: Cytochrome c oxidase
polypeptide VIc precursor - Homo sapiens (Human)
Length = 75
Score = 67.7 bits (158), Expect = 7e-11
Identities = 34/67 (50%), Positives = 47/67 (70%), Gaps = 1/67 (1%)
Frame = -1
Query: 262 KPQMRGLLNAVIKRNIIVALALS-GVAGFTFKQLIGNERKRKYAEFYRTYDAEKEFEEMR 86
KP+MRGLL ++ ++ VA LS GVA +K + ++RK+ YA+FYR YD K+FEEMR
Sbjct: 8 KPRMRGLLARRLRNHMAVAFVLSLGVAAL-YKFRVADQRKKAYADFYRNYDVMKDFEEMR 66
Query: 85 KKGRFQA 65
K G FQ+
Sbjct: 67 KAGIFQS 73
>UniRef50_P04038 Cluster: Cytochrome c oxidase polypeptide VIc; n=5;
Bos taurus|Rep: Cytochrome c oxidase polypeptide VIc -
Bos taurus (Bovine)
Length = 73
Score = 67.3 bits (157), Expect = 1e-10
Identities = 37/72 (51%), Positives = 51/72 (70%), Gaps = 2/72 (2%)
Frame = -1
Query: 274 STA-SKPQMRGLLNAVIKRNIIVALALS-GVAGFTFKQLIGNERKRKYAEFYRTYDAEKE 101
STA +KPQMRGLL ++ +I+ A +S G A F +K + +RK+ YA+FYR YD+ K+
Sbjct: 1 STALAKPQMRGLLARRLRFHIVGAFMVSLGFATF-YKFAVAEKRKKAYADFYRNYDSMKD 59
Query: 100 FEEMRKKGRFQA 65
FEEMRK G FQ+
Sbjct: 60 FEEMRKAGIFQS 71
>UniRef50_Q4PM34 Cluster: Cytochrome c oxidase subunit VIc; n=1;
Ixodes scapularis|Rep: Cytochrome c oxidase subunit VIc
- Ixodes scapularis (Black-legged tick) (Deer tick)
Length = 76
Score = 65.3 bits (152), Expect = 4e-10
Identities = 28/67 (41%), Positives = 45/67 (67%)
Frame = -1
Query: 265 SKPQMRGLLNAVIKRNIIVALALSGVAGFTFKQLIGNERKRKYAEFYRTYDAEKEFEEMR 86
++PQ GLL + I++++I+ L+L+GV G + + RK+ YA+FY+TYDA + E M
Sbjct: 4 ARPQFHGLLKSYIRKHLIICLSLAGVGGVAWHYGVCEARKKAYADFYKTYDAAADNERMT 63
Query: 85 KKGRFQA 65
K G FQ+
Sbjct: 64 KLGLFQS 70
>UniRef50_UPI00015548E5 Cluster: PREDICTED: similar to cytochrome c
oxidase subunit VIc; n=1; Ornithorhynchus anatinus|Rep:
PREDICTED: similar to cytochrome c oxidase subunit VIc -
Ornithorhynchus anatinus
Length = 138
Score = 62.9 bits (146), Expect = 2e-09
Identities = 30/66 (45%), Positives = 43/66 (65%)
Frame = -1
Query: 262 KPQMRGLLNAVIKRNIIVALALSGVAGFTFKQLIGNERKRKYAEFYRTYDAEKEFEEMRK 83
KPQMRGLL ++ +I+ A +S +K + RK+ YA+FYR YD+ K+FE+MRK
Sbjct: 69 KPQMRGLLAKRLRFHIVGAFTVSMGLAALYKFGVAEPRKKAYADFYRNYDSMKDFEDMRK 128
Query: 82 KGRFQA 65
G FQ+
Sbjct: 129 AGIFQS 134
>UniRef50_UPI0000587B5E Cluster: PREDICTED: similar to cytochrome c
oxidase subunit VIc; n=1; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to cytochrome c
oxidase subunit VIc - Strongylocentrotus purpuratus
Length = 80
Score = 62.5 bits (145), Expect = 3e-09
Identities = 28/66 (42%), Positives = 43/66 (65%)
Frame = -1
Query: 262 KPQMRGLLNAVIKRNIIVALALSGVAGFTFKQLIGNERKRKYAEFYRTYDAEKEFEEMRK 83
+P+MRGLL++ + R+ I+ LS K + + RK+ Y EFY+TYDA+ +FE MR+
Sbjct: 6 RPKMRGLLSSFLTRHFIIGSVLSLAGAGLVKVFLYDARKKLYTEFYKTYDAQADFERMRE 65
Query: 82 KGRFQA 65
G FQ+
Sbjct: 66 LGVFQS 71
>UniRef50_UPI00004477A4 Cluster: PREDICTED: hypothetical protein;
n=2; Gallus gallus|Rep: PREDICTED: hypothetical protein
- Gallus gallus
Length = 102
Score = 53.6 bits (123), Expect = 1e-06
Identities = 28/66 (42%), Positives = 38/66 (57%)
Frame = -1
Query: 262 KPQMRGLLNAVIKRNIIVALALSGVAGFTFKQLIGNERKRKYAEFYRTYDAEKEFEEMRK 83
KPQMR LL +K ++ A +S +K + RKR YAEFY+ YD K+FE MR
Sbjct: 33 KPQMRRLLARRMKFHLFGAFLVSLGCAALYKFGVAEPRKRAYAEFYKNYDPMKDFEAMRA 92
Query: 82 KGRFQA 65
G F++
Sbjct: 93 AGVFES 98
>UniRef50_Q8T970 Cluster: AT20031p; n=2; Sophophora|Rep: AT20031p -
Drosophila melanogaster (Fruit fly)
Length = 87
Score = 46.0 bits (104), Expect = 3e-04
Identities = 24/64 (37%), Positives = 32/64 (50%)
Frame = -1
Query: 223 RNIIVALALSGVAGFTFKQLIGNERKRKYAEFYRTYDAEKEFEEMRKKGRFQACXR*TSR 44
RN+ +A L+ +A F L N RKRKY FY TYD F+ M G +C +
Sbjct: 20 RNVKMACTLALLAPLLFYTLHNNPRKRKYRNFYSTYDPMDAFDRMMSGGYLSSCPPGSGP 79
Query: 43 VEDD 32
+DD
Sbjct: 80 KKDD 83
>UniRef50_A7GNI6 Cluster: Glycosyl transferase group 1; n=1;
Bacillus cereus subsp. cytotoxis NVH 391-98|Rep:
Glycosyl transferase group 1 - Bacillus cereus subsp.
cytotoxis NVH 391-98
Length = 689
Score = 35.1 bits (77), Expect = 0.48
Identities = 20/48 (41%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Frame = -1
Query: 247 GLLNAVIKRNIIVALALSG-VAGFTFKQLIGNERKRKYAEFYRTYDAE 107
GLLN+VIK + + L G + G + + + E+ RK AEFY+ YD E
Sbjct: 102 GLLNSVIKE-VFPNIPLVGTIHGCIYSETLMWEKNRKNAEFYKEYDDE 148
>UniRef50_A2E5I4 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 800
Score = 35.1 bits (77), Expect = 0.48
Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 2/83 (2%)
Frame = -1
Query: 244 LLNAVI--KRNIIVALALSGVAGFTFKQLIGNERKRKYAEFYRTYDAEKEFEEMRKKGRF 71
L N++I KR+ +LAL+G GF + + NE K EF + Y KE+ E +
Sbjct: 565 LANSIIDSKRDFRSSLALTGTIGFNYAEK-NNEIFEKSLEFSKIYMQCKEYPETMETA-L 622
Query: 70 QACXR*TSRVEDDDDFAVNNVII 2
Q +VE+ D F+ ++II
Sbjct: 623 QCAALLLRKVENPDVFSEFSIII 645
>UniRef50_Q7SAZ9 Cluster: Putative uncharacterized protein
NCU07626.1; n=1; Neurospora crassa|Rep: Putative
uncharacterized protein NCU07626.1 - Neurospora crassa
Length = 254
Score = 33.9 bits (74), Expect = 1.1
Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
Frame = +2
Query: 155 ITNELLEGKTSDARESQSNNNVTFDDGVEETSHL---RLARCRYCTF 286
+T GKT+ A+ N N+T+ +G + T H+ ARCR CTF
Sbjct: 39 VTGPTACGKTTVAKALAENLNLTYVEGDDPTFHVVCTLTARCRLCTF 85
>UniRef50_P20610 Cluster: Cytochrome c oxidase subunit 7s; n=2;
Dictyostelium discoideum|Rep: Cytochrome c oxidase
subunit 7s - Dictyostelium discoideum (Slime mold)
Length = 55
Score = 32.7 bits (71), Expect = 2.6
Identities = 15/46 (32%), Positives = 27/46 (58%)
Frame = -1
Query: 244 LLNAVIKRNIIVALALSGVAGFTFKQLIGNERKRKYAEFYRTYDAE 107
++ + + ++I VAL L +AG FK + +++R+ FY YD E
Sbjct: 8 VVKSQLVQDIGVALILGSIAGCFFKYGVDKKKQRERVAFYEKYDKE 53
>UniRef50_Q1AST6 Cluster: Putative uncharacterized protein
precursor; n=1; Rubrobacter xylanophilus DSM 9941|Rep:
Putative uncharacterized protein precursor - Rubrobacter
xylanophilus (strain DSM 9941 / NBRC 16129)
Length = 309
Score = 31.9 bits (69), Expect = 4.5
Identities = 23/73 (31%), Positives = 34/73 (46%)
Frame = -1
Query: 343 PLCN*AFLISVKL*LDMAGESAVSTASKPQMRGLLNAVIKRNIIVALALSGVAGFTFKQL 164
PL + FL ++ + + +A + A +P G L AV + ALA VAG T +
Sbjct: 196 PLRSRRFLAALAMAAAVCAAAAGAGAQEPAAWGGLLAVSPAGLAAALAGGAVAGVTVRAR 255
Query: 163 IGNERKRKYAEFY 125
G R R AE +
Sbjct: 256 CGTLRGRMLAELF 268
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 336,132,718
Number of Sequences: 1657284
Number of extensions: 5549788
Number of successful extensions: 16188
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 15791
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16176
length of database: 575,637,011
effective HSP length: 92
effective length of database: 423,166,883
effective search space used: 16080341554
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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