Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_pT_I05
         (467 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF393496-1|AAL60421.1|  146|Apis mellifera odorant binding prote...    25   0.54 
AF339140-1|AAK01304.1|  120|Apis mellifera odorant binding prote...    25   0.54 
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    24   0.71 
DQ325126-1|ABD14140.1|  174|Apis mellifera complementary sex det...    22   2.9  
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               21   6.6  
AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.      21   6.6  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          21   8.7  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      21   8.7  
DQ026036-1|AAY87895.1|  529|Apis mellifera nicotinic acetylcholi...    21   8.7  
DQ026035-1|AAY87894.1|  529|Apis mellifera nicotinic acetylcholi...    21   8.7  

>AF393496-1|AAL60421.1|  146|Apis mellifera odorant binding protein
           ASP6 protein.
          Length = 146

 Score = 24.6 bits (51), Expect = 0.54
 Identities = 17/65 (26%), Positives = 25/65 (38%)
 Frame = +2

Query: 32  KNHLILPTFVPLFKTYSRVETQLLTLRGVFQVFCAKFFKAEVNCITCWHQVIVVYNLDER 211
           KN +IL  F         +E  +  +  V +  C K   +   C   W     +Y  D+ 
Sbjct: 83  KNDVILWDFFVKNARMILLEEYIPRVESVVET-CKKEVTSTEGCEVAWQFGKCIYENDKE 141

Query: 212 LYLGP 226
           LYL P
Sbjct: 142 LYLAP 146


>AF339140-1|AAK01304.1|  120|Apis mellifera odorant binding protein
           protein.
          Length = 120

 Score = 24.6 bits (51), Expect = 0.54
 Identities = 17/65 (26%), Positives = 25/65 (38%)
 Frame = +2

Query: 32  KNHLILPTFVPLFKTYSRVETQLLTLRGVFQVFCAKFFKAEVNCITCWHQVIVVYNLDER 211
           KN +IL  F         +E  +  +  V +  C K   +   C   W     +Y  D+ 
Sbjct: 57  KNDVILWDFFVKNARMILLEEYIPRVESVVET-CKKEVTSTEGCEVAWQFGKCIYENDKE 115

Query: 212 LYLGP 226
           LYL P
Sbjct: 116 LYLAP 120


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 24.2 bits (50), Expect = 0.71
 Identities = 11/23 (47%), Positives = 12/23 (52%)
 Frame = -3

Query: 336 ITTKVPPTSHTGMPSSLVSTGTP 268
           IT + PP  HT      VS GTP
Sbjct: 608 ITIQEPPQWHTRSTEKRVSAGTP 630


>DQ325126-1|ABD14140.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +1

Query: 361 PRTGHLGPALLYP 399
           PR  H+GP+ L+P
Sbjct: 139 PRFRHIGPSTLFP 151


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +1

Query: 13  LRTKLLEEPLDSSHFCTSLQ 72
           L  K+L EPL   HF  +L+
Sbjct: 682 LSEKILAEPLVKEHFKKALE 701


>AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.
          Length = 429

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 12/37 (32%), Positives = 20/37 (54%)
 Frame = +2

Query: 131 CAKFFKAEVNCITCWHQVIVVYNLDERLYLGPLVDFI 241
           C+ +F+  +    C H VIV+ ++     L  LV+FI
Sbjct: 53  CSPYFRELLKSTPCKHPVIVLQDV-AFSDLHALVEFI 88


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 9/31 (29%), Positives = 17/31 (54%)
 Frame = -2

Query: 202 KVVNYNHLMPTRYTVDFSFEKFSAKDLKDPA 110
           K++ YN    ++Y +  S  +  +  +KDPA
Sbjct: 387 KILGYNLEAASKYQIVPSALEIFSTSMKDPA 417


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 9/31 (29%), Positives = 17/31 (54%)
 Frame = -2

Query: 202 KVVNYNHLMPTRYTVDFSFEKFSAKDLKDPA 110
           K++ YN    ++Y +  S  +  +  +KDPA
Sbjct: 387 KILGYNLEAASKYQIVPSALEIFSTSMKDPA 417


>DQ026036-1|AAY87895.1|  529|Apis mellifera nicotinic acetylcholine
           receptor alpha6subunit protein.
          Length = 529

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -2

Query: 205 VKVVNYNHLMPTRYTV 158
           V V+N++H  P RY +
Sbjct: 344 VLVLNFHHRTPDRYVM 359


>DQ026035-1|AAY87894.1|  529|Apis mellifera nicotinic acetylcholine
           receptor alpha6subunit protein.
          Length = 529

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -2

Query: 205 VKVVNYNHLMPTRYTV 158
           V V+N++H  P RY +
Sbjct: 344 VLVLNFHHRTPDRYVM 359


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 134,913
Number of Sequences: 438
Number of extensions: 3109
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12559158
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)