Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_pT_I02
         (771 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    24   1.2  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    24   1.2  
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    23   2.7  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    22   4.7  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    22   4.7  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    22   4.7  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    22   4.7  
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    21   8.2  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    21   8.2  

>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +1

Query: 694  YCALSIFIIAAFIHHGYFDC 753
            +C  + FIIAA +H   F+C
Sbjct: 982  FCMAAEFIIAALLHPQEFNC 1001


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +1

Query: 694  YCALSIFIIAAFIHHGYFDC 753
            +C  + FIIAA +H   F+C
Sbjct: 982  FCMAAEFIIAALLHPQEFNC 1001


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = -2

Query: 557 KACIAPKSICIFPNSKLKRRRISKM 483
           +AC++P+   +  NS+  R R  KM
Sbjct: 15  EACVSPEGSLLPSNSREMRNRAEKM 39


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = -1

Query: 489  KDVLSNMNVNKIFNND 442
            KDV  N +VNK F  D
Sbjct: 1517 KDVFENGHVNKAFEED 1532


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = -1

Query: 489  KDVLSNMNVNKIFNND 442
            KDV  N +VNK F  D
Sbjct: 1517 KDVFENGHVNKAFEED 1532


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = -1

Query: 489  KDVLSNMNVNKIFNND 442
            KDV  N +VNK F  D
Sbjct: 1517 KDVFENGHVNKAFEED 1532


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = -1

Query: 489  KDVLSNMNVNKIFNND 442
            KDV  N +VNK F  D
Sbjct: 1517 KDVFENGHVNKAFEED 1532


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory
          receptor candidate 56 protein.
          Length = 358

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = +2

Query: 29 IKTSXHPLYYCC 64
          + T+ HPL+Y C
Sbjct: 16 VYTAIHPLFYVC 27


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory
          receptor candidate 21 protein.
          Length = 386

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = +2

Query: 29 IKTSXHPLYYCC 64
          + T+ HPL+Y C
Sbjct: 16 VYTAIHPLFYVC 27


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,967
Number of Sequences: 336
Number of extensions: 3102
Number of successful extensions: 14
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20753800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)