BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P28_pT_I02
(771 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U50301-7|AAB37055.1| 366|Caenorhabditis elegans Serpin protein ... 79 3e-15
AY525083-1|AAS13531.1| 366|Caenorhabditis elegans serine or cys... 79 3e-15
U50301-6|AAT81198.1| 366|Caenorhabditis elegans Serpin protein ... 77 1e-14
AY525084-1|AAS13532.1| 366|Caenorhabditis elegans serine or cys... 77 1e-14
U50301-5|AAT81199.1| 365|Caenorhabditis elegans Serpin protein ... 77 1e-14
AY525085-1|AAS13533.1| 365|Caenorhabditis elegans serine or cys... 77 1e-14
U97008-19|AAB52318.2| 375|Caenorhabditis elegans Serpin protein... 66 3e-11
AY525082-1|AAS13530.1| 375|Caenorhabditis elegans serine or cys... 66 3e-11
AF026209-15|AAB71270.1| 359|Caenorhabditis elegans Serpin prote... 55 6e-08
AY525079-1|AAS13528.1| 359|Caenorhabditis elegans serine or cys... 54 1e-07
AY525080-1|AAS13529.1| 362|Caenorhabditis elegans serine or cys... 52 3e-07
AC087794-5|AAM48555.1| 362|Caenorhabditis elegans Serpin protei... 52 3e-07
U50301-8|AAB37049.1| 339|Caenorhabditis elegans Serpin protein ... 48 6e-06
AY525078-1|AAS13527.1| 366|Caenorhabditis elegans serine or cys... 47 1e-05
AF026209-12|AAB71272.1| 366|Caenorhabditis elegans Serpin prote... 47 1e-05
U97008-18|AAB52317.2| 115|Caenorhabditis elegans Serpin protein... 43 3e-04
Z48055-11|CAI58650.1| 1013|Caenorhabditis elegans Hypothetical p... 33 0.17
Z29443-14|CAI59118.1| 1013|Caenorhabditis elegans Hypothetical p... 33 0.17
L23648-10|AAK95878.2| 368|Caenorhabditis elegans Hypothetical p... 32 0.52
U41995-9|AAN84830.1| 77|Caenorhabditis elegans Hypothetical pr... 30 2.1
U41995-8|AAN84829.1| 350|Caenorhabditis elegans Hypothetical pr... 30 2.1
U41995-7|AAP68946.1| 405|Caenorhabditis elegans Hypothetical pr... 30 2.1
AF016450-3|AAB65992.3| 811|Caenorhabditis elegans Hypothetical ... 30 2.1
Z81571-4|CAB04614.1| 268|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z81571-2|CAB04611.1| 202|Caenorhabditis elegans Hypothetical pr... 29 3.7
U41026-4|AAA82351.2| 265|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z50177-7|CAA90542.3| 178|Caenorhabditis elegans Hypothetical pr... 29 4.8
AJ243182-1|CAB45863.1| 2857|Caenorhabditis elegans inositol 1,4,... 29 4.8
AJ243181-1|CAB45862.1| 2836|Caenorhabditis elegans inositol 1,4,... 29 4.8
AJ243180-1|CAB45861.1| 2892|Caenorhabditis elegans inositol 1,4,... 29 4.8
AJ243179-1|CAB45860.1| 2846|Caenorhabditis elegans inositol 1,4,... 29 4.8
AF168688-1|AAF05302.1| 2846|Caenorhabditis elegans inositol 1,4,... 29 4.8
AF036702-5|AAM98028.1| 1713|Caenorhabditis elegans Inositol trip... 29 4.8
AF036702-4|AAK68365.1| 2857|Caenorhabditis elegans Inositol trip... 29 4.8
AF036702-3|AAK68366.1| 2846|Caenorhabditis elegans Inositol trip... 29 4.8
AF036702-2|AAW30669.1| 2836|Caenorhabditis elegans Inositol trip... 29 4.8
AF036702-1|AAW30668.1| 2892|Caenorhabditis elegans Inositol trip... 29 4.8
U53150-7|ABB51189.1| 1375|Caenorhabditis elegans Twik family of ... 28 6.4
U53150-6|ABB51187.1| 1544|Caenorhabditis elegans Twik family of ... 28 6.4
U53150-5|ABB51188.1| 1720|Caenorhabditis elegans Twik family of ... 28 6.4
U41995-6|AAA83463.2| 419|Caenorhabditis elegans Hypothetical pr... 28 6.4
AF099001-6|AAC68738.2| 661|Caenorhabditis elegans Lateral signa... 28 8.5
>U50301-7|AAB37055.1| 366|Caenorhabditis elegans Serpin protein 7,
isoform a protein.
Length = 366
Score = 79.0 bits (186), Expect = 3e-15
Identities = 45/157 (28%), Positives = 83/157 (52%), Gaps = 1/157 (0%)
Frame = -1
Query: 684 QLIEIPYKGDQSSLIVVLPKDKDGITQLQEALKDPKTLETAQQSMYSTEVDLYLPKFKIE 505
Q++ +PYK + +L + LPK + G+T+ + L D T++ ++ ST V++ +PK+KIE
Sbjct: 211 QVLSLPYKDNTFALTIFLPKTRFGLTESLKTL-DSATIQHLLSNVSSTSVNVQIPKWKIE 269
Query: 504 TETNLKDVLSNMNVNKIFNNDAQITRLLKGESLSVSEAIQKXXXXXXXXXXXXXXXXXFT 325
T+ L++ L ++ + K F+NDA + + G L VS+ K +
Sbjct: 270 TKLGLEEALQSLGIKKAFDNDADLGNMADG--LYVSKVTHKALIEVDEEGTKAAAATTVS 327
Query: 324 MTRSSKVYV-RPPIVFNANKPFYYALQVDGVIMFNGI 217
++ S ++V P F A+ PF++ L D +F G+
Sbjct: 328 ISLKSAMFVMEEPKDFTADHPFFFVLSKDNHPLFVGL 364
Score = 29.9 bits (64), Expect = 2.1
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = -3
Query: 169 QPLVFKANHPFVFFLKGDGVTLFNGVFH 86
+P F A+HPF F L D LF G+ H
Sbjct: 339 EPKDFTADHPFFFVLSKDNHPLFVGLHH 366
>AY525083-1|AAS13531.1| 366|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 366
Score = 79.0 bits (186), Expect = 3e-15
Identities = 45/157 (28%), Positives = 83/157 (52%), Gaps = 1/157 (0%)
Frame = -1
Query: 684 QLIEIPYKGDQSSLIVVLPKDKDGITQLQEALKDPKTLETAQQSMYSTEVDLYLPKFKIE 505
Q++ +PYK + +L + LPK + G+T+ + L D T++ ++ ST V++ +PK+KIE
Sbjct: 211 QVLSLPYKDNTFALTIFLPKTRFGLTESLKTL-DSATIQHLLSNVSSTSVNVQIPKWKIE 269
Query: 504 TETNLKDVLSNMNVNKIFNNDAQITRLLKGESLSVSEAIQKXXXXXXXXXXXXXXXXXFT 325
T+ L++ L ++ + K F+NDA + + G L VS+ K +
Sbjct: 270 TKLGLEEALQSLGIKKAFDNDADLGNMADG--LYVSKVTHKALIEVDEEGTKAAAATTVS 327
Query: 324 MTRSSKVYV-RPPIVFNANKPFYYALQVDGVIMFNGI 217
++ S ++V P F A+ PF++ L D +F G+
Sbjct: 328 ISLKSAMFVMEEPKDFTADHPFFFVLSKDNHPLFVGL 364
Score = 29.9 bits (64), Expect = 2.1
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = -3
Query: 169 QPLVFKANHPFVFFLKGDGVTLFNGVFH 86
+P F A+HPF F L D LF G+ H
Sbjct: 339 EPKDFTADHPFFFVLSKDNHPLFVGLHH 366
>U50301-6|AAT81198.1| 366|Caenorhabditis elegans Serpin protein 7,
isoform b protein.
Length = 366
Score = 77.4 bits (182), Expect = 1e-14
Identities = 47/157 (29%), Positives = 81/157 (51%), Gaps = 1/157 (0%)
Frame = -1
Query: 684 QLIEIPYKGDQSSLIVVLPKDKDGITQLQEALKDPKTLETAQQSMYSTEVDLYLPKFKIE 505
Q++ +PYK + +L + LPK + G+T+ + L D T++ ++ ST V++ +PK+KIE
Sbjct: 211 QVLSLPYKDNTFALTIFLPKTRFGLTESLKTL-DSATIQHLLSNVSSTSVNVQIPKWKIE 269
Query: 504 TETNLKDVLSNMNVNKIFNNDAQITRLLKGESLSVSEAIQKXXXXXXXXXXXXXXXXXFT 325
T+ L++ L ++ + K F+NDA + + G L VS+ K +
Sbjct: 270 TKLGLEEALQSLGIKKAFDNDADLGNMADG--LYVSKVTHKALIEVDEEGTTAAAATVVS 327
Query: 324 MTR-SSKVYVRPPIVFNANKPFYYALQVDGVIMFNGI 217
R S++ PIVF A+ PF + L +F GI
Sbjct: 328 FVRKSARPSAIKPIVFQADHPFLFMLTQTNHPIFLGI 364
Score = 29.9 bits (64), Expect = 2.1
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = -3
Query: 169 QPLVFKANHPFVFFLKGDGVTLFNGV 92
+P+VF+A+HPF+F L +F G+
Sbjct: 339 KPIVFQADHPFLFMLTQTNHPIFLGI 364
>AY525084-1|AAS13532.1| 366|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 366
Score = 77.4 bits (182), Expect = 1e-14
Identities = 47/157 (29%), Positives = 81/157 (51%), Gaps = 1/157 (0%)
Frame = -1
Query: 684 QLIEIPYKGDQSSLIVVLPKDKDGITQLQEALKDPKTLETAQQSMYSTEVDLYLPKFKIE 505
Q++ +PYK + +L + LPK + G+T+ + L D T++ ++ ST V++ +PK+KIE
Sbjct: 211 QVLSLPYKDNTFALTIFLPKTRFGLTESLKTL-DSATIQHLLSNVSSTSVNVQIPKWKIE 269
Query: 504 TETNLKDVLSNMNVNKIFNNDAQITRLLKGESLSVSEAIQKXXXXXXXXXXXXXXXXXFT 325
T+ L++ L ++ + K F+NDA + + G L VS+ K +
Sbjct: 270 TKLGLEEALQSLGIKKAFDNDADLGNMADG--LYVSKVTHKALIEVDEEGTTAAAATVVS 327
Query: 324 MTR-SSKVYVRPPIVFNANKPFYYALQVDGVIMFNGI 217
R S++ PIVF A+ PF + L +F GI
Sbjct: 328 FVRKSARPSAIKPIVFQADHPFLFMLTQTNHPIFLGI 364
Score = 29.9 bits (64), Expect = 2.1
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = -3
Query: 169 QPLVFKANHPFVFFLKGDGVTLFNGV 92
+P+VF+A+HPF+F L +F G+
Sbjct: 339 KPIVFQADHPFLFMLTQTNHPIFLGI 364
>U50301-5|AAT81199.1| 365|Caenorhabditis elegans Serpin protein 7,
isoform c protein.
Length = 365
Score = 77.0 bits (181), Expect = 1e-14
Identities = 45/157 (28%), Positives = 82/157 (52%)
Frame = -1
Query: 684 QLIEIPYKGDQSSLIVVLPKDKDGITQLQEALKDPKTLETAQQSMYSTEVDLYLPKFKIE 505
Q++ +PYK + +L + LPK + G+T+ + L D T++ ++ ST V++ +PK+KIE
Sbjct: 211 QVLSLPYKDNTFALTIFLPKTRFGLTESLKTL-DSATIQHLLSNVSSTSVNVQIPKWKIE 269
Query: 504 TETNLKDVLSNMNVNKIFNNDAQITRLLKGESLSVSEAIQKXXXXXXXXXXXXXXXXXFT 325
T+ L++ L ++ + K F+NDA + + G L VS+ K +
Sbjct: 270 TKLGLEEALQSLGIKKAFDNDADLGNMADG--LYVSKVTHKALIEVDEDGTVAVAATRCS 327
Query: 324 MTRSSKVYVRPPIVFNANKPFYYALQVDGVIMFNGIF 214
+ R K ++ I F+A PF++ L +F G+F
Sbjct: 328 IERCRK-KMKENIEFHAEHPFFFILHHGTSYIFLGVF 363
>AY525085-1|AAS13533.1| 365|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 365
Score = 77.0 bits (181), Expect = 1e-14
Identities = 45/157 (28%), Positives = 82/157 (52%)
Frame = -1
Query: 684 QLIEIPYKGDQSSLIVVLPKDKDGITQLQEALKDPKTLETAQQSMYSTEVDLYLPKFKIE 505
Q++ +PYK + +L + LPK + G+T+ + L D T++ ++ ST V++ +PK+KIE
Sbjct: 211 QVLSLPYKDNTFALTIFLPKTRFGLTESLKTL-DSATIQHLLSNVSSTSVNVQIPKWKIE 269
Query: 504 TETNLKDVLSNMNVNKIFNNDAQITRLLKGESLSVSEAIQKXXXXXXXXXXXXXXXXXFT 325
T+ L++ L ++ + K F+NDA + + G L VS+ K +
Sbjct: 270 TKLGLEEALQSLGIKKAFDNDADLGNMADG--LYVSKVTHKALIEVDEDGTVAVAATRCS 327
Query: 324 MTRSSKVYVRPPIVFNANKPFYYALQVDGVIMFNGIF 214
+ R K ++ I F+A PF++ L +F G+F
Sbjct: 328 IERCRK-KMKENIEFHAEHPFFFILHHGTSYIFLGVF 363
>U97008-19|AAB52318.2| 375|Caenorhabditis elegans Serpin protein 6
protein.
Length = 375
Score = 65.7 bits (153), Expect = 3e-11
Identities = 44/172 (25%), Positives = 80/172 (46%), Gaps = 1/172 (0%)
Frame = -1
Query: 729 KRGDYKYGESAVLNAQLIEIPYKGDQSSLIVVLPKDKDGITQLQEALKDPKTLETAQQSM 550
+ + KY E+ Q++ +PYK +L + LPK + G+++ + L D T++ +
Sbjct: 207 RNSNRKYSENGQF--QVLSLPYKDTSFALSIFLPKTRFGLSEALQNL-DSVTIQQLMSNT 263
Query: 549 YSTEVDLYLPKFKIETETNLKDVLSNMNVNKIFNNDAQITRLLKGESLSVSEAIQKXXXX 370
+T V++ +PK+KIET L L + + K F + A ++ G + +S+A K
Sbjct: 264 SNTLVNIAMPKWKIETALGLNRALMAVGIEKAFTDSADLSNFADG--IYISQAAHKALIE 321
Query: 369 XXXXXXXXXXXXXFTMTRSSK-VYVRPPIVFNANKPFYYALQVDGVIMFNGI 217
+ + +S + PI F A+ PF + L D +F GI
Sbjct: 322 VDEDGTVAAAATTISFSLTSVFIPAEEPIEFTADHPFLFILSKDNHPLFIGI 373
Score = 31.1 bits (67), Expect = 0.91
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = -3
Query: 169 QPLVFKANHPFVFFLKGDGVTLFNGV 92
+P+ F A+HPF+F L D LF G+
Sbjct: 348 EPIEFTADHPFLFILSKDNHPLFIGI 373
>AY525082-1|AAS13530.1| 375|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 375
Score = 65.7 bits (153), Expect = 3e-11
Identities = 44/172 (25%), Positives = 80/172 (46%), Gaps = 1/172 (0%)
Frame = -1
Query: 729 KRGDYKYGESAVLNAQLIEIPYKGDQSSLIVVLPKDKDGITQLQEALKDPKTLETAQQSM 550
+ + KY E+ Q++ +PYK +L + LPK + G+++ + L D T++ +
Sbjct: 207 RNSNRKYSENGQF--QVLSLPYKDTSFALSIFLPKTRFGLSEALQNL-DSVTIQQLMSNT 263
Query: 549 YSTEVDLYLPKFKIETETNLKDVLSNMNVNKIFNNDAQITRLLKGESLSVSEAIQKXXXX 370
+T V++ +PK+KIET L L + + K F + A ++ G + +S+A K
Sbjct: 264 SNTLVNIAMPKWKIETALGLNRALMAVGIEKAFTDSADLSNFADG--IYISQAAHKALIE 321
Query: 369 XXXXXXXXXXXXXFTMTRSSK-VYVRPPIVFNANKPFYYALQVDGVIMFNGI 217
+ + +S + PI F A+ PF + L D +F GI
Sbjct: 322 VDEDGTVAAAATTISFSLTSVFIPAEEPIEFTADHPFLFILSKDNHPLFIGI 373
Score = 31.1 bits (67), Expect = 0.91
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = -3
Query: 169 QPLVFKANHPFVFFLKGDGVTLFNGV 92
+P+ F A+HPF+F L D LF G+
Sbjct: 348 EPIEFTADHPFLFILSKDNHPLFIGI 373
>AF026209-15|AAB71270.1| 359|Caenorhabditis elegans Serpin protein
2 protein.
Length = 359
Score = 54.8 bits (126), Expect = 6e-08
Identities = 39/186 (20%), Positives = 87/186 (46%), Gaps = 1/186 (0%)
Frame = -1
Query: 771 YVSXDKTIKVPMMYKRGDYK-YGESAVLNAQLIEIPYKGDQSSLIVVLPKDKDGITQLQE 595
+ S ++ ++P + + +++ Y E + Q++ + Y + +L + LPK + G+ E
Sbjct: 178 FTSEAESRQIPFLTELDEHRDYTEDVLF--QVLSLKYADPKFTLAIFLPKQRFGLVDALE 235
Query: 594 ALKDPKTLETAQQSMYSTEVDLYLPKFKIETETNLKDVLSNMNVNKIFNNDAQITRLLKG 415
+ + ++ + S+ V + +PKFKIE E +LK+ L + + +IF A ++ +
Sbjct: 236 KING-EYIQNLLNDLKSSYVSVQIPKFKIEKELDLKETLEAIGIKEIFAEGADLSGI--A 292
Query: 414 ESLSVSEAIQKXXXXXXXXXXXXXXXXXFTMTRSSKVYVRPPIVFNANKPFYYALQVDGV 235
+ + +S I K F + + + + P F A+ PF +A+ +
Sbjct: 293 DKVFISSGIHKAIIEVDEDGTTAAAASAFKV-QLEMMIMAEPTQFVADHPFLFAVLFENH 351
Query: 234 IMFNGI 217
+F G+
Sbjct: 352 TLFLGV 357
>AY525079-1|AAS13528.1| 359|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 359
Score = 53.6 bits (123), Expect = 1e-07
Identities = 39/186 (20%), Positives = 86/186 (46%), Gaps = 1/186 (0%)
Frame = -1
Query: 771 YVSXDKTIKVPMMYKRGDYK-YGESAVLNAQLIEIPYKGDQSSLIVVLPKDKDGITQLQE 595
+ S ++ ++P + +++ Y E + Q++ + Y + +L + LPK + G+ E
Sbjct: 178 FTSEAESRQIPFLTDVDEHRDYTEDVLF--QVLSLKYADPKFTLAIFLPKQRFGLVDALE 235
Query: 594 ALKDPKTLETAQQSMYSTEVDLYLPKFKIETETNLKDVLSNMNVNKIFNNDAQITRLLKG 415
+ + ++ + S+ V + +PKFKIE E +LK+ L + + +IF A ++ +
Sbjct: 236 KING-EYIQNLLNDLKSSYVSVQIPKFKIEKELDLKETLEAIGIKEIFAEGADLSGI--A 292
Query: 414 ESLSVSEAIQKXXXXXXXXXXXXXXXXXFTMTRSSKVYVRPPIVFNANKPFYYALQVDGV 235
+ + +S I K F + + + + P F A+ PF +A+ +
Sbjct: 293 DKVFISSGIHKAIIEVDEDGTTAAAASAFKV-QLEMMIMAEPTQFVADHPFLFAVLFENH 351
Query: 234 IMFNGI 217
+F G+
Sbjct: 352 TLFLGV 357
>AY525080-1|AAS13529.1| 362|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 362
Score = 52.4 bits (120), Expect = 3e-07
Identities = 38/158 (24%), Positives = 72/158 (45%), Gaps = 2/158 (1%)
Frame = -1
Query: 681 LIEIPYKGDQSSLIVVLPKDKDGITQLQEALKDPKTLETAQQSMYSTEVDLYLPKFKIET 502
++ + Y + V LPK ++ + + + L + K ++ T ++ LPKF IE
Sbjct: 209 VLHVAYSDQRYQFSVFLPKLRNSLKEALKKLNE-KRFNDLLKTKKRTFMNTQLPKFTIEK 267
Query: 501 ETNLKDVLSNMNVNKIFNNDAQITRLLKGESLSVSEAIQKXXXXXXXXXXXXXXXXXFTM 322
+ NLK L + + IF++ A ++ L E+L +SE + K TM
Sbjct: 268 DLNLKSHLQTLGITDIFSDSADLSGL--AENLKISEGVHK---AIIEVNEEGTTAAAVTM 322
Query: 321 TRSSKVYVR--PPIVFNANKPFYYALQVDGVIMFNGIF 214
++ + R P+ F A+ PF++ + +F G+F
Sbjct: 323 MKAVPMSARMEQPVNFIADHPFFFTITFLNHPIFVGVF 360
>AC087794-5|AAM48555.1| 362|Caenorhabditis elegans Serpin protein 3
protein.
Length = 362
Score = 52.4 bits (120), Expect = 3e-07
Identities = 38/158 (24%), Positives = 72/158 (45%), Gaps = 2/158 (1%)
Frame = -1
Query: 681 LIEIPYKGDQSSLIVVLPKDKDGITQLQEALKDPKTLETAQQSMYSTEVDLYLPKFKIET 502
++ + Y + V LPK ++ + + + L + K ++ T ++ LPKF IE
Sbjct: 209 VLHVAYSDQRYQFSVFLPKLRNSLKEALKKLNE-KRFNDLLKTKKRTFMNTQLPKFTIEK 267
Query: 501 ETNLKDVLSNMNVNKIFNNDAQITRLLKGESLSVSEAIQKXXXXXXXXXXXXXXXXXFTM 322
+ NLK L + + IF++ A ++ L E+L +SE + K TM
Sbjct: 268 DLNLKSHLQTLGITDIFSDSADLSGL--AENLKISEGVHK---AIIEVNEEGTTAAAVTM 322
Query: 321 TRSSKVYVR--PPIVFNANKPFYYALQVDGVIMFNGIF 214
++ + R P+ F A+ PF++ + +F G+F
Sbjct: 323 MKAVPMSARMEQPVNFIADHPFFFTITFLNHPIFVGVF 360
>U50301-8|AAB37049.1| 339|Caenorhabditis elegans Serpin protein 8
protein.
Length = 339
Score = 48.4 bits (110), Expect = 6e-06
Identities = 26/101 (25%), Positives = 53/101 (52%)
Frame = -1
Query: 684 QLIEIPYKGDQSSLIVVLPKDKDGITQLQEALKDPKTLETAQQSMYSTEVDLYLPKFKIE 505
Q++ +PY + + LPK++ G+ + + L T++ + ++ + V++ +P ++ E
Sbjct: 212 QVLSLPYTDSSFEMTIFLPKEQFGLAEALKTL-GTSTIQELKSNVSNYLVNVQIPIWRNE 270
Query: 504 TETNLKDVLSNMNVNKIFNNDAQITRLLKGESLSVSEAIQK 382
TE +L L + + KI N A I E++ +SE I K
Sbjct: 271 TEIDLNSTLQAIGITKILNESAYIGNF--AENVHISEFIHK 309
>AY525078-1|AAS13527.1| 366|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 366
Score = 47.2 bits (107), Expect = 1e-05
Identities = 30/122 (24%), Positives = 58/122 (47%)
Frame = -1
Query: 768 VSXDKTIKVPMMYKRGDYKYGESAVLNAQLIEIPYKGDQSSLIVVLPKDKDGITQLQEAL 589
+S + VPM+ + DY Y + Q+I IP+K + + LP + + + ++L
Sbjct: 187 ISATENRLVPMLRETRDYFYNKDD--EWQVIGIPFKDKSAWFAIFLPTRRFALAENLKSL 244
Query: 588 KDPKTLETAQQSMYSTEVDLYLPKFKIETETNLKDVLSNMNVNKIFNNDAQITRLLKGES 409
K ++Y + L PKFK++ + NLK L+ + ++F A ++ + G
Sbjct: 245 NAAK-FHNLINNVYQEYIFLTFPKFKMDYKINLKTALAKFGLAELFTEQADLSGIGPGLQ 303
Query: 408 LS 403
L+
Sbjct: 304 LA 305
>AF026209-12|AAB71272.1| 366|Caenorhabditis elegans Serpin protein
1 protein.
Length = 366
Score = 47.2 bits (107), Expect = 1e-05
Identities = 30/122 (24%), Positives = 58/122 (47%)
Frame = -1
Query: 768 VSXDKTIKVPMMYKRGDYKYGESAVLNAQLIEIPYKGDQSSLIVVLPKDKDGITQLQEAL 589
+S + VPM+ + DY Y + Q+I IP+K + + LP + + + ++L
Sbjct: 187 ISATENRLVPMLRETRDYFYNKDD--EWQVIGIPFKDKSAWFAIFLPTRRFALAENLKSL 244
Query: 588 KDPKTLETAQQSMYSTEVDLYLPKFKIETETNLKDVLSNMNVNKIFNNDAQITRLLKGES 409
K ++Y + L PKFK++ + NLK L+ + ++F A ++ + G
Sbjct: 245 NAAK-FHNLINNVYQEYIFLTFPKFKMDYKINLKTALAKFGLAELFTEQADLSGIGPGLQ 303
Query: 408 LS 403
L+
Sbjct: 304 LA 305
>U97008-18|AAB52317.2| 115|Caenorhabditis elegans Serpin protein 5
protein.
Length = 115
Score = 42.7 bits (96), Expect = 3e-04
Identities = 28/110 (25%), Positives = 47/110 (42%)
Frame = -1
Query: 546 STEVDLYLPKFKIETETNLKDVLSNMNVNKIFNNDAQITRLLKGESLSVSEAIQKXXXXX 367
+T V++ +PK+KIET L L + + K F + A ++ G + +S+A K
Sbjct: 6 NTLVNIAMPKWKIETALGLNRGLMAVGIEKAFTDSADLSNFADG--IYISQAAHKALIEV 63
Query: 366 XXXXXXXXXXXXFTMTRSSKVYVRPPIVFNANKPFYYALQVDGVIMFNGI 217
+ + S PI F A+ PF + L D +F G+
Sbjct: 64 DEDGTVAAAATTISSSVGSVQRTEKPIEFTADHPFLFILSKDNHPLFIGV 113
Score = 31.1 bits (67), Expect = 0.91
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = -3
Query: 169 QPLVFKANHPFVFFLKGDGVTLFNGV 92
+P+ F A+HPF+F L D LF GV
Sbjct: 88 KPIEFTADHPFLFILSKDNHPLFIGV 113
>Z48055-11|CAI58650.1| 1013|Caenorhabditis elegans Hypothetical
protein T07C4.10 protein.
Length = 1013
Score = 33.5 bits (73), Expect = 0.17
Identities = 24/71 (33%), Positives = 41/71 (57%)
Frame = -1
Query: 636 VLPKDKDGITQLQEALKDPKTLETAQQSMYSTEVDLYLPKFKIETETNLKDVLSNMNVNK 457
V K+K+ I QL++ K+ KT+ ++++Y +E L +E+E NLK+ L M V K
Sbjct: 400 VSEKEKEAIEQLEKIQKENKTI--VKENVYLSESKQVL----LESEINLKNELDEMAV-K 452
Query: 456 IFNNDAQITRL 424
+ N+ Q+ L
Sbjct: 453 LRNSQHQVAGL 463
>Z29443-14|CAI59118.1| 1013|Caenorhabditis elegans Hypothetical
protein T07C4.10 protein.
Length = 1013
Score = 33.5 bits (73), Expect = 0.17
Identities = 24/71 (33%), Positives = 41/71 (57%)
Frame = -1
Query: 636 VLPKDKDGITQLQEALKDPKTLETAQQSMYSTEVDLYLPKFKIETETNLKDVLSNMNVNK 457
V K+K+ I QL++ K+ KT+ ++++Y +E L +E+E NLK+ L M V K
Sbjct: 400 VSEKEKEAIEQLEKIQKENKTI--VKENVYLSESKQVL----LESEINLKNELDEMAV-K 452
Query: 456 IFNNDAQITRL 424
+ N+ Q+ L
Sbjct: 453 LRNSQHQVAGL 463
>L23648-10|AAK95878.2| 368|Caenorhabditis elegans Hypothetical
protein F44B9.8 protein.
Length = 368
Score = 31.9 bits (69), Expect = 0.52
Identities = 26/75 (34%), Positives = 38/75 (50%), Gaps = 4/75 (5%)
Frame = -2
Query: 290 QSFSMQTNRFTMPFKLMVL---LCLTESL*ISLRRSIYECSCKSAACIQSEPSLRILPK- 123
Q+FS +N T+PFKL++L +T+ +LRR I + + CI I+P
Sbjct: 124 QAFSTSSNTGTVPFKLVILDEADAMTKDAQNALRRVIEKYTDNVRFCIICNYLASIVPAI 183
Query: 122 RRRCHSF*RSFPPLD 78
+ RC F F PLD
Sbjct: 184 QSRCTRF--RFAPLD 196
>U41995-9|AAN84830.1| 77|Caenorhabditis elegans Hypothetical
protein E02C12.8b protein.
Length = 77
Score = 29.9 bits (64), Expect = 2.1
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = +1
Query: 193 LRRRLIYKDSVKHNNTINLKGIVKRFVCIENDWRS 297
L R + ++ + N +LKG + R C+E DW++
Sbjct: 28 LGTRATFGENKRATNISDLKGFMSRIACLEPDWQN 62
>U41995-8|AAN84829.1| 350|Caenorhabditis elegans Hypothetical
protein E02C12.8a protein.
Length = 350
Score = 29.9 bits (64), Expect = 2.1
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = +1
Query: 193 LRRRLIYKDSVKHNNTINLKGIVKRFVCIENDWRS 297
L R + ++ + N +LKG + R C+E DW++
Sbjct: 28 LGTRATFGENKRATNISDLKGFMSRIACLEPDWQN 62
>U41995-7|AAP68946.1| 405|Caenorhabditis elegans Hypothetical
protein E02C12.8c protein.
Length = 405
Score = 29.9 bits (64), Expect = 2.1
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = +1
Query: 193 LRRRLIYKDSVKHNNTINLKGIVKRFVCIENDWRS 297
L R + ++ + N +LKG + R C+E DW++
Sbjct: 28 LGTRATFGENKRATNISDLKGFMSRIACLEPDWQN 62
>AF016450-3|AAB65992.3| 811|Caenorhabditis elegans Hypothetical
protein B0238.13 protein.
Length = 811
Score = 29.9 bits (64), Expect = 2.1
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = -1
Query: 291 PIVFNANKPFYYALQVDGVIMFNG 220
PIVF N+PF A+Q++ V F+G
Sbjct: 756 PIVFGKNRPFNAAIQMEKVYRFHG 779
>Z81571-4|CAB04614.1| 268|Caenorhabditis elegans Hypothetical
protein M01G12.5 protein.
Length = 268
Score = 29.1 bits (62), Expect = 3.7
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = -3
Query: 166 PLVFKANHPFVFFLKGDGVTLFNGVF 89
P +F+ N PF+F + +GV + G+F
Sbjct: 240 PYIFRVNRPFIFCVVQNGVPVTMGIF 265
>Z81571-2|CAB04611.1| 202|Caenorhabditis elegans Hypothetical
protein M01G12.2 protein.
Length = 202
Score = 29.1 bits (62), Expect = 3.7
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = -3
Query: 166 PLVFKANHPFVFFLKGDGVTLFNGVF 89
P +F+ N PF+F + +GV + G+F
Sbjct: 174 PYIFRVNRPFIFCVVQNGVPVTMGIF 199
>U41026-4|AAA82351.2| 265|Caenorhabditis elegans Hypothetical
protein C28G1.2 protein.
Length = 265
Score = 29.1 bits (62), Expect = 3.7
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = -3
Query: 166 PLVFKANHPFVFFLKGDGVTLFNGVF 89
P F+A+HPFVF + +G ++ GVF
Sbjct: 239 PYHFRADHPFVFAVLRNGHPVYFGVF 264
>Z50177-7|CAA90542.3| 178|Caenorhabditis elegans Hypothetical
protein F46G10.1a protein.
Length = 178
Score = 28.7 bits (61), Expect = 4.8
Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Frame = -1
Query: 636 VLPKDKDGITQLQEALKDPKTLETAQQSMYSTEVDLYLPKFKIETETNLKDVLSNMN-VN 460
VLPKDKD + QL+ D +E + + T VD+ + E N D++ N VN
Sbjct: 111 VLPKDKDVLAQLKRE-ADFFGMEVFKYLIQETLVDI-----EKEQRANTNDIVDIRNSVN 164
Query: 459 KIFNN 445
+I NN
Sbjct: 165 QIANN 169
>AJ243182-1|CAB45863.1| 2857|Caenorhabditis elegans inositol
1,4,5-trisphosphate receptorprotein.
Length = 2857
Score = 28.7 bits (61), Expect = 4.8
Identities = 26/101 (25%), Positives = 49/101 (48%), Gaps = 7/101 (6%)
Frame = -1
Query: 675 EIPYKGDQSSLIVVLPKDKDGITQLQEALKDPKT----LETAQQSMYSTEVDLYLPKFK- 511
++ Y + L+ + + K+G T+L+ A + P + TA+Q + + +YL
Sbjct: 1475 KLKYHIELVRLLAMCTRGKNGNTELKCASQIPMDHIVRVVTAKQCLVEVKT-VYLQLLLH 1533
Query: 510 --IETETNLKDVLSNMNVNKIFNNDAQITRLLKGESLSVSE 394
I+T+ +KD V+ I NN + R L+ E L+ +E
Sbjct: 1534 CYIDTDAEMKDAYKTEYVDHILNNLLEDIRSLRVEKLTGAE 1574
>AJ243181-1|CAB45862.1| 2836|Caenorhabditis elegans inositol
1,4,5-trisphosphate receptorprotein.
Length = 2836
Score = 28.7 bits (61), Expect = 4.8
Identities = 26/101 (25%), Positives = 49/101 (48%), Gaps = 7/101 (6%)
Frame = -1
Query: 675 EIPYKGDQSSLIVVLPKDKDGITQLQEALKDPKT----LETAQQSMYSTEVDLYLPKFK- 511
++ Y + L+ + + K+G T+L+ A + P + TA+Q + + +YL
Sbjct: 1456 KLKYHIELVRLLAMCTRGKNGNTELKCASQIPMDHIVRVVTAKQCLVEVKT-VYLQLLLH 1514
Query: 510 --IETETNLKDVLSNMNVNKIFNNDAQITRLLKGESLSVSE 394
I+T+ +KD V+ I NN + R L+ E L+ +E
Sbjct: 1515 CYIDTDAEMKDAYKTEYVDHILNNLLEDIRSLRVEKLTGAE 1555
>AJ243180-1|CAB45861.1| 2892|Caenorhabditis elegans inositol
1,4,5-trisphosphate receptorprotein.
Length = 2892
Score = 28.7 bits (61), Expect = 4.8
Identities = 26/101 (25%), Positives = 49/101 (48%), Gaps = 7/101 (6%)
Frame = -1
Query: 675 EIPYKGDQSSLIVVLPKDKDGITQLQEALKDPKT----LETAQQSMYSTEVDLYLPKFK- 511
++ Y + L+ + + K+G T+L+ A + P + TA+Q + + +YL
Sbjct: 1512 KLKYHIELVRLLAMCTRGKNGNTELKCASQIPMDHIVRVVTAKQCLVEVKT-VYLQLLLH 1570
Query: 510 --IETETNLKDVLSNMNVNKIFNNDAQITRLLKGESLSVSE 394
I+T+ +KD V+ I NN + R L+ E L+ +E
Sbjct: 1571 CYIDTDAEMKDAYKTEYVDHILNNLLEDIRSLRVEKLTGAE 1611
>AJ243179-1|CAB45860.1| 2846|Caenorhabditis elegans inositol
1,4,5-trisphosphate receptorprotein.
Length = 2846
Score = 28.7 bits (61), Expect = 4.8
Identities = 26/101 (25%), Positives = 49/101 (48%), Gaps = 7/101 (6%)
Frame = -1
Query: 675 EIPYKGDQSSLIVVLPKDKDGITQLQEALKDPKT----LETAQQSMYSTEVDLYLPKFK- 511
++ Y + L+ + + K+G T+L+ A + P + TA+Q + + +YL
Sbjct: 1466 KLKYHIELVRLLAMCTRGKNGNTELKCASQIPMDHIVRVVTAKQCLVEVKT-VYLQLLLH 1524
Query: 510 --IETETNLKDVLSNMNVNKIFNNDAQITRLLKGESLSVSE 394
I+T+ +KD V+ I NN + R L+ E L+ +E
Sbjct: 1525 CYIDTDAEMKDAYKTEYVDHILNNLLEDIRSLRVEKLTGAE 1565
>AF168688-1|AAF05302.1| 2846|Caenorhabditis elegans inositol
1,4,5-trisphosphate receptorprotein.
Length = 2846
Score = 28.7 bits (61), Expect = 4.8
Identities = 26/101 (25%), Positives = 49/101 (48%), Gaps = 7/101 (6%)
Frame = -1
Query: 675 EIPYKGDQSSLIVVLPKDKDGITQLQEALKDPKT----LETAQQSMYSTEVDLYLPKFK- 511
++ Y + L+ + + K+G T+L+ A + P + TA+Q + + +YL
Sbjct: 1466 KLKYHIELVRLLAMCTRGKNGNTELKCASQIPMDHIVRVVTAKQCLVEVKT-VYLQLLLH 1524
Query: 510 --IETETNLKDVLSNMNVNKIFNNDAQITRLLKGESLSVSE 394
I+T+ +KD V+ I NN + R L+ E L+ +E
Sbjct: 1525 CYIDTDAEMKDAYKTEYVDHILNNLLEDIRSLRVEKLTGAE 1565
>AF036702-5|AAM98028.1| 1713|Caenorhabditis elegans Inositol
triphosphate receptorprotein 1, isoform g protein.
Length = 1713
Score = 28.7 bits (61), Expect = 4.8
Identities = 26/101 (25%), Positives = 49/101 (48%), Gaps = 7/101 (6%)
Frame = -1
Query: 675 EIPYKGDQSSLIVVLPKDKDGITQLQEALKDPKT----LETAQQSMYSTEVDLYLPKFK- 511
++ Y + L+ + + K+G T+L+ A + P + TA+Q + + +YL
Sbjct: 1466 KLKYHIELVRLLAMCTRGKNGNTELKCASQIPMDHIVRVVTAKQCLVEVKT-VYLQLLLH 1524
Query: 510 --IETETNLKDVLSNMNVNKIFNNDAQITRLLKGESLSVSE 394
I+T+ +KD V+ I NN + R L+ E L+ +E
Sbjct: 1525 CYIDTDAEMKDAYKTEYVDHILNNLLEDIRSLRVEKLTGAE 1565
>AF036702-4|AAK68365.1| 2857|Caenorhabditis elegans Inositol
triphosphate receptorprotein 1, isoform e protein.
Length = 2857
Score = 28.7 bits (61), Expect = 4.8
Identities = 26/101 (25%), Positives = 49/101 (48%), Gaps = 7/101 (6%)
Frame = -1
Query: 675 EIPYKGDQSSLIVVLPKDKDGITQLQEALKDPKT----LETAQQSMYSTEVDLYLPKFK- 511
++ Y + L+ + + K+G T+L+ A + P + TA+Q + + +YL
Sbjct: 1475 KLKYHIELVRLLAMCTRGKNGNTELKCASQIPMDHIVRVVTAKQCLVEVKT-VYLQLLLH 1533
Query: 510 --IETETNLKDVLSNMNVNKIFNNDAQITRLLKGESLSVSE 394
I+T+ +KD V+ I NN + R L+ E L+ +E
Sbjct: 1534 CYIDTDAEMKDAYKTEYVDHILNNLLEDIRSLRVEKLTGAE 1574
>AF036702-3|AAK68366.1| 2846|Caenorhabditis elegans Inositol
triphosphate receptorprotein 1, isoform f protein.
Length = 2846
Score = 28.7 bits (61), Expect = 4.8
Identities = 26/101 (25%), Positives = 49/101 (48%), Gaps = 7/101 (6%)
Frame = -1
Query: 675 EIPYKGDQSSLIVVLPKDKDGITQLQEALKDPKT----LETAQQSMYSTEVDLYLPKFK- 511
++ Y + L+ + + K+G T+L+ A + P + TA+Q + + +YL
Sbjct: 1466 KLKYHIELVRLLAMCTRGKNGNTELKCASQIPMDHIVRVVTAKQCLVEVKT-VYLQLLLH 1524
Query: 510 --IETETNLKDVLSNMNVNKIFNNDAQITRLLKGESLSVSE 394
I+T+ +KD V+ I NN + R L+ E L+ +E
Sbjct: 1525 CYIDTDAEMKDAYKTEYVDHILNNLLEDIRSLRVEKLTGAE 1565
>AF036702-2|AAW30669.1| 2836|Caenorhabditis elegans Inositol
triphosphate receptorprotein 1, isoform d protein.
Length = 2836
Score = 28.7 bits (61), Expect = 4.8
Identities = 26/101 (25%), Positives = 49/101 (48%), Gaps = 7/101 (6%)
Frame = -1
Query: 675 EIPYKGDQSSLIVVLPKDKDGITQLQEALKDPKT----LETAQQSMYSTEVDLYLPKFK- 511
++ Y + L+ + + K+G T+L+ A + P + TA+Q + + +YL
Sbjct: 1456 KLKYHIELVRLLAMCTRGKNGNTELKCASQIPMDHIVRVVTAKQCLVEVKT-VYLQLLLH 1514
Query: 510 --IETETNLKDVLSNMNVNKIFNNDAQITRLLKGESLSVSE 394
I+T+ +KD V+ I NN + R L+ E L+ +E
Sbjct: 1515 CYIDTDAEMKDAYKTEYVDHILNNLLEDIRSLRVEKLTGAE 1555
>AF036702-1|AAW30668.1| 2892|Caenorhabditis elegans Inositol
triphosphate receptorprotein 1, isoform a protein.
Length = 2892
Score = 28.7 bits (61), Expect = 4.8
Identities = 26/101 (25%), Positives = 49/101 (48%), Gaps = 7/101 (6%)
Frame = -1
Query: 675 EIPYKGDQSSLIVVLPKDKDGITQLQEALKDPKT----LETAQQSMYSTEVDLYLPKFK- 511
++ Y + L+ + + K+G T+L+ A + P + TA+Q + + +YL
Sbjct: 1512 KLKYHIELVRLLAMCTRGKNGNTELKCASQIPMDHIVRVVTAKQCLVEVKT-VYLQLLLH 1570
Query: 510 --IETETNLKDVLSNMNVNKIFNNDAQITRLLKGESLSVSE 394
I+T+ +KD V+ I NN + R L+ E L+ +E
Sbjct: 1571 CYIDTDAEMKDAYKTEYVDHILNNLLEDIRSLRVEKLTGAE 1611
>U53150-7|ABB51189.1| 1375|Caenorhabditis elegans Twik family of
potassium channelsprotein 11, isoform c protein.
Length = 1375
Score = 28.3 bits (60), Expect = 6.4
Identities = 17/62 (27%), Positives = 29/62 (46%)
Frame = -1
Query: 714 KYGESAVLNAQLIEIPYKGDQSSLIVVLPKDKDGITQLQEALKDPKTLETAQQSMYSTEV 535
K E A ++ L + D+S +V +PK+ Q E+ L TA +S+ + +V
Sbjct: 855 KEPEVAEISLDLSVVALGVDESGKVVDIPKEVPKAVQRHESFSPTSELTTASESLSAEKV 914
Query: 534 DL 529
L
Sbjct: 915 HL 916
>U53150-6|ABB51187.1| 1544|Caenorhabditis elegans Twik family of
potassium channelsprotein 11, isoform a protein.
Length = 1544
Score = 28.3 bits (60), Expect = 6.4
Identities = 17/62 (27%), Positives = 29/62 (46%)
Frame = -1
Query: 714 KYGESAVLNAQLIEIPYKGDQSSLIVVLPKDKDGITQLQEALKDPKTLETAQQSMYSTEV 535
K E A ++ L + D+S +V +PK+ Q E+ L TA +S+ + +V
Sbjct: 855 KEPEVAEISLDLSVVALGVDESGKVVDIPKEVPKAVQRHESFSPTSELTTASESLSAEKV 914
Query: 534 DL 529
L
Sbjct: 915 HL 916
>U53150-5|ABB51188.1| 1720|Caenorhabditis elegans Twik family of
potassium channelsprotein 11, isoform b protein.
Length = 1720
Score = 28.3 bits (60), Expect = 6.4
Identities = 17/62 (27%), Positives = 29/62 (46%)
Frame = -1
Query: 714 KYGESAVLNAQLIEIPYKGDQSSLIVVLPKDKDGITQLQEALKDPKTLETAQQSMYSTEV 535
K E A ++ L + D+S +V +PK+ Q E+ L TA +S+ + +V
Sbjct: 855 KEPEVAEISLDLSVVALGVDESGKVVDIPKEVPKAVQRHESFSPTSELTTASESLSAEKV 914
Query: 534 DL 529
L
Sbjct: 915 HL 916
>U41995-6|AAA83463.2| 419|Caenorhabditis elegans Hypothetical
protein E02C12.6 protein.
Length = 419
Score = 28.3 bits (60), Expect = 6.4
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = +1
Query: 232 NNTINLKGIVKRFVCIENDWRS 297
+N +LKG + R C+E DW++
Sbjct: 41 SNISDLKGFMSRIACVEPDWQN 62
>AF099001-6|AAC68738.2| 661|Caenorhabditis elegans Lateral
signaling target protein 2 protein.
Length = 661
Score = 27.9 bits (59), Expect = 8.5
Identities = 14/72 (19%), Positives = 38/72 (52%)
Frame = -1
Query: 612 ITQLQEALKDPKTLETAQQSMYSTEVDLYLPKFKIETETNLKDVLSNMNVNKIFNNDAQI 433
+T+ E +++P ++ + S +EVD ++ + + E++ + D + +V ++ +
Sbjct: 389 VTESPETIEEPDNVDMEESS--ESEVDTHIDETRNESDDEITDDVQASDVLQVETKKCKS 446
Query: 432 TRLLKGESLSVS 397
+RLL+ + S
Sbjct: 447 SRLLEQKKFDKS 458
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,154,196
Number of Sequences: 27780
Number of extensions: 289198
Number of successful extensions: 769
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 705
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 755
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1851132448
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -