Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_pT_H24
         (313 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    20   5.3  
AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    20   5.3  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    20   6.9  
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    19   9.2  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    19   9.2  
AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory recept...    19   9.2  

>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 20.2 bits (40), Expect = 5.3
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -3

Query: 71  RCVRGPNKRXHGALIT 24
           R +RGP KR   A +T
Sbjct: 281 RNIRGPRKRLRFAYVT 296


>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 20.2 bits (40), Expect = 5.3
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = +3

Query: 105 FFRHLALISKQLKSRERYY 161
           F   +A+ SKQ++  + YY
Sbjct: 119 FNEDIAVFSKQIRQEKPYY 137


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 19.8 bits (39), Expect = 6.9
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = +2

Query: 47  VYLDLARIFLLLRFXPTHTLLSPLSSHF 130
           + L  +RIF L+ F P  +   P S  F
Sbjct: 17  ILLFQSRIFGLVTFTPDRSKFRPSSLRF 44


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 19.4 bits (38), Expect = 9.2
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +1

Query: 178 LKMTNILIDLQSVYRA 225
           LKM   L+D +SV R+
Sbjct: 198 LKMATQLVDFKSVIRS 213


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 19.4 bits (38), Expect = 9.2
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = +2

Query: 62  ARIFLLLRFXPTHTLLSPLSSHF 130
           +RIF L+ F P  +   P S  F
Sbjct: 297 SRIFGLVTFTPDRSKFRPSSLRF 319


>AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory receptor
           candidate 28 protein.
          Length = 248

 Score = 19.4 bits (38), Expect = 9.2
 Identities = 7/38 (18%), Positives = 18/38 (47%)
 Frame = -3

Query: 302 GRPMTSKSSKIRIYPSSVVSYLTDACAR*TDCKSIKIF 189
           G P    SS  +++P   + ++ +A      C++  ++
Sbjct: 179 GNPYCFNSSVYKVFPVEHLLFIANAFITSQSCENATLY 216


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 64,795
Number of Sequences: 336
Number of extensions: 1056
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  5730534
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)