Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_pT_H20
         (675 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC033588-1|AAH33588.1|  131|Homo sapiens transmembrane protein 3...    93   1e-18
AL953870-2|CAI41375.1|  131|Homo sapiens transmembrane protein 3...    93   1e-18
AL732579-1|CAI39920.2|  131|Homo sapiens transmembrane protein 3...    93   1e-18
AJ406941-1|CAC27580.1|  191|Homo sapiens keratin associated prot...    31   3.7  

>BC033588-1|AAH33588.1|  131|Homo sapiens transmembrane protein 32
           protein.
          Length = 131

 Score = 92.7 bits (220), Expect = 1e-18
 Identities = 38/88 (43%), Positives = 61/88 (69%)
 Frame = -2

Query: 674 GFLSLFHTAFSATXHRSYLRITSQEFTTLPLDIVIQAVVSLFAVMWGVLNVAGNLREIPA 495
           G  +L H AFSA  HRSY+R+T +E  +LP+DIV+Q +++     +G++++AG  +++ A
Sbjct: 13  GLFALAHAAFSAAQHRSYMRLTEKEDESLPIDIVLQTLLAFAVTCYGIVHIAGEFKDMDA 72

Query: 494 AAELNAIKWETQNNLPSFYIFNHRGKAL 411
            +EL    ++T  N PSFY+FNHRG+ L
Sbjct: 73  TSELKNKTFDTLRNHPSFYVFNHRGRVL 100


>AL953870-2|CAI41375.1|  131|Homo sapiens transmembrane protein 32
           protein.
          Length = 131

 Score = 92.7 bits (220), Expect = 1e-18
 Identities = 38/88 (43%), Positives = 61/88 (69%)
 Frame = -2

Query: 674 GFLSLFHTAFSATXHRSYLRITSQEFTTLPLDIVIQAVVSLFAVMWGVLNVAGNLREIPA 495
           G  +L H AFSA  HRSY+R+T +E  +LP+DIV+Q +++     +G++++AG  +++ A
Sbjct: 13  GLFALAHAAFSAAQHRSYMRLTEKEDESLPIDIVLQTLLAFAVTCYGIVHIAGEFKDMDA 72

Query: 494 AAELNAIKWETQNNLPSFYIFNHRGKAL 411
            +EL    ++T  N PSFY+FNHRG+ L
Sbjct: 73  TSELKNKTFDTLRNHPSFYVFNHRGRVL 100


>AL732579-1|CAI39920.2|  131|Homo sapiens transmembrane protein 32
           protein.
          Length = 131

 Score = 92.7 bits (220), Expect = 1e-18
 Identities = 38/88 (43%), Positives = 61/88 (69%)
 Frame = -2

Query: 674 GFLSLFHTAFSATXHRSYLRITSQEFTTLPLDIVIQAVVSLFAVMWGVLNVAGNLREIPA 495
           G  +L H AFSA  HRSY+R+T +E  +LP+DIV+Q +++     +G++++AG  +++ A
Sbjct: 13  GLFALAHAAFSAAQHRSYMRLTEKEDESLPIDIVLQTLLAFAVTCYGIVHIAGEFKDMDA 72

Query: 494 AAELNAIKWETQNNLPSFYIFNHRGKAL 411
            +EL    ++T  N PSFY+FNHRG+ L
Sbjct: 73  TSELKNKTFDTLRNHPSFYVFNHRGRVL 100


>AJ406941-1|CAC27580.1|  191|Homo sapiens keratin associated protein
           4.9 protein.
          Length = 191

 Score = 31.1 bits (67), Expect = 3.7
 Identities = 14/35 (40%), Positives = 16/35 (45%)
 Frame = -1

Query: 576 CHPSCGQFVCCHVGSVECGG*SSRNTSCC*IKCYQ 472
           C P C Q VCC      C   S   T+CC   CY+
Sbjct: 31  CRPQCCQSVCC---QPTCSRPSCCQTTCCRTTCYR 62


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,458,648
Number of Sequences: 237096
Number of extensions: 1627905
Number of successful extensions: 2810
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2491
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2761
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7615267504
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)